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The map label for this gene is slmA [H]

Identifier: 118580337

GI number: 118580337

Start: 2070353

End: 2070961

Strand: Reverse

Name: slmA [H]

Synonym: Ppro_1920

Alternate gene names: 118580337

Gene position: 2070961-2070353 (Counterclockwise)

Preceding gene: 118580338

Following gene: 118580336

Centisome position: 51.67

GC content: 56.98

Gene sequence:

>609_bases
GTGGACACCCATCCAAAGCATCTGCCGGCCGATGAACGTCGTGCCGTAACTGTCGAGTCCGTCGTGGCGCTTGCCGGTTC
ACAAAACCCAAGCGAGATAACCACTGCGGCTATCGCTAAACACATGAACTTGACCCAGGGTGCGCTGTTTCGGCACTTCC
CGAACAAGGAAGCCATTTGGCAGGCGGTCATGGAGTGGGTAGCAGAGCGCCTATTAGCCAGAATCGATCGATCCGCACAA
GGAATCGATTCGCCCTTGGCAGCCATGGAGGCGATGTTCATGAGTCATATCGAATTCGTAGCTGAGCACCCAGGCGTGCC
AAGAATGATGTTTGGTGAGCTTCAGCGTGCCGAATCGACACCGGCCAAGCGCATGGTGCAAACCTTGATTCAGCGCTACG
GCGAACGTTTGCATCGTCTCATCGAGAAAGGCAAGGCCAGCGGCGAGTTGTCTCCCTCGCTTGACAACGAGGCGGCGGCA
ACGCTGTTCATTGGCACGATCCAGGGCTTGGTCATGCAATCGCTGTTGGCGGGTGATGTGGGACGTATGCACCGCGATGC
GCCGCGCGTCTTTGCAATTTATCGGCGTGGCATAAGGAGTGCGCAATGA

Upstream 100 bases:

>100_bases
TTGCAGACTCTAGATATTGACGAGTACGTCGGGTTTTCTCTTGTTTGAGTTGCCTCTTGTGGTAAGATAGTAATCATTTA
CTATCTTACAAGGAGTGCTC

Downstream 100 bases:

>100_bases
AAAAGTTACCCTTGCAAGGCCGCACCCTGGCGCTGCTTGCCGTCATCATTCCTTTGCTGGTGCTTTTTATTTATGTCGGT
CTGCGATCAGGGCCGCTCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MDTHPKHLPADERRAVTVESVVALAGSQNPSEITTAAIAKHMNLTQGALFRHFPNKEAIWQAVMEWVAERLLARIDRSAQ
GIDSPLAAMEAMFMSHIEFVAEHPGVPRMMFGELQRAESTPAKRMVQTLIQRYGERLHRLIEKGKASGELSPSLDNEAAA
TLFIGTIQGLVMQSLLAGDVGRMHRDAPRVFAIYRRGIRSAQ

Sequences:

>Translated_202_residues
MDTHPKHLPADERRAVTVESVVALAGSQNPSEITTAAIAKHMNLTQGALFRHFPNKEAIWQAVMEWVAERLLARIDRSAQ
GIDSPLAAMEAMFMSHIEFVAEHPGVPRMMFGELQRAESTPAKRMVQTLIQRYGERLHRLIEKGKASGELSPSLDNEAAA
TLFIGTIQGLVMQSLLAGDVGRMHRDAPRVFAIYRRGIRSAQ
>Mature_202_residues
MDTHPKHLPADERRAVTVESVVALAGSQNPSEITTAAIAKHMNLTQGALFRHFPNKEAIWQAVMEWVAERLLARIDRSAQ
GIDSPLAAMEAMFMSHIEFVAEHPGVPRMMFGELQRAESTPAKRMVQTLIQRYGERLHRLIEKGKASGELSPSLDNEAAA
TLFIGTIQGLVMQSLLAGDVGRMHRDAPRVFAIYRRGIRSAQ

Specific function: Required for nucleoid occlusion (NO) phenomenon, which cooperates in the proper positioning of the ftsZ/septal ring at midcell during cell division [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22406; Mature: 22406

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTHPKHLPADERRAVTVESVVALAGSQNPSEITTAAIAKHMNLTQGALFRHFPNKEAIW
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHH
QAVMEWVAERLLARIDRSAQGIDSPLAAMEAMFMSHIEFVAEHPGVPRMMFGELQRAEST
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PAKRMVQTLIQRYGERLHRLIEKGKASGELSPSLDNEAAATLFIGTIQGLVMQSLLAGDV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GRMHRDAPRVFAIYRRGIRSAQ
HHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDTHPKHLPADERRAVTVESVVALAGSQNPSEITTAAIAKHMNLTQGALFRHFPNKEAIW
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHH
QAVMEWVAERLLARIDRSAQGIDSPLAAMEAMFMSHIEFVAEHPGVPRMMFGELQRAEST
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PAKRMVQTLIQRYGERLHRLIEKGKASGELSPSLDNEAAATLFIGTIQGLVMQSLLAGDV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GRMHRDAPRVFAIYRRGIRSAQ
HHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]