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The map label for this gene is yfjY [C]

Identifier: 118580303

GI number: 118580303

Start: 2036718

End: 2037218

Strand: Direct

Name: yfjY [C]

Synonym: Ppro_1885

Alternate gene names: 118580303

Gene position: 2036718-2037218 (Clockwise)

Preceding gene: 118580302

Following gene: 118580304

Centisome position: 50.82

GC content: 48.9

Gene sequence:

>501_bases
ATGAATATGAAGGAATTATTCCAGGAAGACGGCCCGGATTGTCGCACCAAGACACTGCGGTTGCGGGTAATGAGACCCGT
CTTCAGCAGGGAAGTTATCCGGGAGGATATGCCGGACTATATTGACACTAAAAGGTTTACCTCACCACTTCAGGTGTTCG
AGATGTTCCGGGACCTAGTAATTGAGACGAAGGAGCACTTTCTATGCCTCCACCTCGATGGAAAGAATCGGATTGTCTGT
CTGGATCGAGTATCAGTTGGCAGTCTAAATCAGAGCATTGTCAATGTCAGAGAAGTCCTGAAATCTGCACTCCTGAGTTC
TGCTGCGGCGATTCTGCTGGTCCATAATCACCCTTCCGGTGATCCGACTCCCAGCGGTGAAGATATTGCCATTACCAGAC
GTCTCAAAGAATCGGGAGAACTGATCTGCATTCCGGTGCTCGATCATATCATCATTGGCGATGGTCAGTATGTCTCTTTC
GTAGAGAGGGGGCTGTTATGA

Upstream 100 bases:

>100_bases
TTACAGGACAACGCTCAACCGATGGTTGTTCCCCGCAATCTTTGCCCTGGCGCTCACCCTGGGGCTCTTCGTTGTTATCG
GCACGCGGTAAGGAGGGGTT

Downstream 100 bases:

>100_bases
CAACTGAGATTATCAAACGCGATACGGTGGCACAACTGGTTGAAAACTATGAAACTGCCGTGGATGATATCACCCAAGCC
TATAGCCTGTTGCATGCTGC

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNMKELFQEDGPDCRTKTLRLRVMRPVFSREVIREDMPDYIDTKRFTSPLQVFEMFRDLVIETKEHFLCLHLDGKNRIVC
LDRVSVGSLNQSIVNVREVLKSALLSSAAAILLVHNHPSGDPTPSGEDIAITRRLKESGELICIPVLDHIIIGDGQYVSF
VERGLL

Sequences:

>Translated_166_residues
MNMKELFQEDGPDCRTKTLRLRVMRPVFSREVIREDMPDYIDTKRFTSPLQVFEMFRDLVIETKEHFLCLHLDGKNRIVC
LDRVSVGSLNQSIVNVREVLKSALLSSAAAILLVHNHPSGDPTPSGEDIAITRRLKESGELICIPVLDHIIIGDGQYVSF
VERGLL
>Mature_166_residues
MNMKELFQEDGPDCRTKTLRLRVMRPVFSREVIREDMPDYIDTKRFTSPLQVFEMFRDLVIETKEHFLCLHLDGKNRIVC
LDRVSVGSLNQSIVNVREVLKSALLSSAAAILLVHNHPSGDPTPSGEDIAITRRLKESGELICIPVLDHIIIGDGQYVSF
VERGLL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788997, Length=103, Percent_Identity=45.6310679611651, Blast_Score=98, Evalue=3e-22,
Organism=Escherichia coli, GI2367100, Length=122, Percent_Identity=42.6229508196721, Blast_Score=97, Evalue=4e-22,
Organism=Escherichia coli, GI87082300, Length=127, Percent_Identity=41.7322834645669, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1788312, Length=103, Percent_Identity=44.6601941747573, Blast_Score=93, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001405 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 18846; Mature: 18846

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKELFQEDGPDCRTKTLRLRVMRPVFSREVIREDMPDYIDTKRFTSPLQVFEMFRDLV
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHH
IETKEHFLCLHLDGKNRIVCLDRVSVGSLNQSIVNVREVLKSALLSSAAAILLVHNHPSG
HHCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
DPTPSGEDIAITRRLKESGELICIPVLDHIIIGDGQYVSFVERGLL
CCCCCCCCCHHHHHHHHCCCEEEEEEHHHEEECCCHHHHHHHHCCC
>Mature Secondary Structure
MNMKELFQEDGPDCRTKTLRLRVMRPVFSREVIREDMPDYIDTKRFTSPLQVFEMFRDLV
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHH
IETKEHFLCLHLDGKNRIVCLDRVSVGSLNQSIVNVREVLKSALLSSAAAILLVHNHPSG
HHCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCC
DPTPSGEDIAITRRLKESGELICIPVLDHIIIGDGQYVSFVERGLL
CCCCCCCCCHHHHHHHHCCCEEEEEEHHHEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA