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The map label for this gene is yafM [C]

Identifier: 118580275

GI number: 118580275

Start: 1996765

End: 1997292

Strand: Reverse

Name: yafM [C]

Synonym: Ppro_1855

Alternate gene names: 118580275

Gene position: 1997292-1996765 (Counterclockwise)

Preceding gene: 118580276

Following gene: 118580274

Centisome position: 49.83

GC content: 48.67

Gene sequence:

>528_bases
ATGAACTATAGGCGGGTAAAAACTGAAGGTGGCACCTATTTTTTCACGGTTAACCTTGCTGACCGTCGCCAAGCCACACT
CGTGGATCATATTGATCTGCTGCGTTCTGTCATCAGCCTGGTAAAAGATCGACATCCGTTTGCCCTCGAATCAATCGTAA
TAATGCCCGAACATCTCCACACAATCTGGACGCTGCCAGAAGGAGATAAAGACTATCCCACCCGGTGGGCTCTTATCAAA
GCAGGTTTCTCCCGAAATATTGCAAAGGTCGAGATGATAGGTGCAAGCCGGGCCGCCAAAGGTGAGCGTGGCATCTGGCA
ACGTCGCTATTGGGAGCATCTGATTCGTAATGACGAGGATTTTACGCGACATGTGGATTACATCCATTTCAATCCGGTTA
AACATGGCTATGTGTCAAACCCGATTGACTGGCCGTATTCCTCCATTCACCGCTTTGTAGCATCAGGGATAGTGCCGGCC
AATTGGGGGGCTTTGTCTTTAGAAATTTCGGGGGATTTCGGTGAATAA

Upstream 100 bases:

>100_bases
CGTACCGTGAACCCCAACGTTACGGCGTCGGCACCCTTGACCCCGTTGGGGTTTGTGACTCACCCCCAACCTACGAACTA
CTCTCATGGGATGATGACCT

Downstream 100 bases:

>100_bases
GAGTCGTTGGGGTTCGTACCTCACCCCAACCTACGAAAACCTGCCTGTGTAGGTTGGGGTGAACGGACGTACCGTGAACC
CCAACGATGCAATTTAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MNYRRVKTEGGTYFFTVNLADRRQATLVDHIDLLRSVISLVKDRHPFALESIVIMPEHLHTIWTLPEGDKDYPTRWALIK
AGFSRNIAKVEMIGASRAAKGERGIWQRRYWEHLIRNDEDFTRHVDYIHFNPVKHGYVSNPIDWPYSSIHRFVASGIVPA
NWGALSLEISGDFGE

Sequences:

>Translated_175_residues
MNYRRVKTEGGTYFFTVNLADRRQATLVDHIDLLRSVISLVKDRHPFALESIVIMPEHLHTIWTLPEGDKDYPTRWALIK
AGFSRNIAKVEMIGASRAAKGERGIWQRRYWEHLIRNDEDFTRHVDYIHFNPVKHGYVSNPIDWPYSSIHRFVASGIVPA
NWGALSLEISGDFGE
>Mature_175_residues
MNYRRVKTEGGTYFFTVNLADRRQATLVDHIDLLRSVISLVKDRHPFALESIVIMPEHLHTIWTLPEGDKDYPTRWALIK
AGFSRNIAKVEMIGASRAAKGERGIWQRRYWEHLIRNDEDFTRHVDYIHFNPVKHGYVSNPIDWPYSSIHRFVASGIVPA
NWGALSLEISGDFGE

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yafM [H]

Homologues:

Organism=Escherichia coli, GI1786422, Length=169, Percent_Identity=46.1538461538462, Blast_Score=161, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 20261; Mature: 20261

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYRRVKTEGGTYFFTVNLADRRQATLVDHIDLLRSVISLVKDRHPFALESIVIMPEHLH
CCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHEEECCCHHE
TIWTLPEGDKDYPTRWALIKAGFSRNIAKVEMIGASRAAKGERGIWQRRYWEHLIRNDED
EEEECCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
FTRHVDYIHFNPVKHGYVSNPIDWPYSSIHRFVASGIVPANWGALSLEISGDFGE
HHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MNYRRVKTEGGTYFFTVNLADRRQATLVDHIDLLRSVISLVKDRHPFALESIVIMPEHLH
CCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHEEECCCHHE
TIWTLPEGDKDYPTRWALIKAGFSRNIAKVEMIGASRAAKGERGIWQRRYWEHLIRNDED
EEEECCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCC
FTRHVDYIHFNPVKHGYVSNPIDWPYSSIHRFVASGIVPANWGALSLEISGDFGE
HHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]