| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580238
Identifier: 118580238
GI number: 118580238
Start: 1950960
End: 1952018
Strand: Reverse
Name: 118580238
Synonym: Ppro_1818
Alternate gene names: NA
Gene position: 1952018-1950960 (Counterclockwise)
Preceding gene: 118580239
Following gene: 118580237
Centisome position: 48.7
GC content: 66.48
Gene sequence:
>1059_bases ATGAGCATCGGCGCCATTGTTTCCGCGAACGGTTCAGCAGGAGCCGGTTTCCCGCAGCCGGAGCTGGTGACCATCGACGA GGGAGGCATGCGGCCCGCCACCTTCTCCCTGGGCTATACCCTGAACCTGAAGAGCGGAGATTTCCAACTGCTGAACAGCC GGGAGCTTGGGCCGGATGCGCAGGTGGTGCTGCAGGTGGCACCGGGAGGAGAGCAGCAGACCCTGATCAGCGGCATGGTC CTGCAGCAGTCCGTGGAGTACAGTACGGGAGGGGACGGTTCGGCCCTGGTGGTGCGCGGCGCGGACCGCAGCTCCTTGTT GAACCGCGAACAGCGCTGCCGCGTCTGGAGCGATGTGACCGACTCCTCGATGGTTGAGCAGATCTGCTCAAGCCAGGGCC TAATCCCCCGTTGCGAGGCCACCAGCTGCGTGCATGCCGAAACGAGCCACAGCCTGGTGCAGCGGGAGAGCGACCTGGAG CTGATCTACCGTCTGGCGCGGCGCAACGGCTACTGGTTCTGGCTTAGCTACGATTCCAGCGGCCAGGCCGTAACGGCGCA CTTCCAGAAGCCGCCCCAGGGGGAGCGCCCCTCCCTGACCCTGTCGCTGAGGGCCGGGGCGGCCAACCTGGACGAGCTCT CCCTTTTGTGGGATGTGGATCGCCCCACGGCGGTCAGCGCCCGTCAGCTGGACCTGGTCTCCCTCTCCCCCAACGACGCC AGCATCGACCGTTCGCCGCTTCCCTGCATGGCCAGCCATTCCCTGGCCGATCTGGTCAGTGAGCCGCGCATCAGACAGCT GGCGGTTCCAGTCAGCGATCAGGCCGACCTGCAGGCCCGCGCCGAGGCACTGCTGATGGAGAGCGGCTGGTTCGTGACCG CCCGCGCCACAGGGAGGCTCTCCCGACTGGGGGGAGTGGTGCGGCCCAACAGCGTGGTCACGCTGGACGGTGTGGGATCG CGCCACTCGGGCAGCTACCTGGTGTCGCGGGTGCGGCATCGCATCGATAGCGACGACCACCTGATGACCATGGATCTCAT GCGCAATGGATGGAGCTGA
Upstream 100 bases:
>100_bases ACTGGCGCCTGGCCGAGATCAACGACGCCATGACCGCGGAAGTGCTGACCGAGCTGCGCGAACTGGCGATTCCGGCCAGA ACCAGGGGGGGCTCCGGTTC
Downstream 100 bases:
>100_bases TATGGACTCGGAGCGACTTCTGGAGATAGAGGAACGCCTGGCCCTGCTGGAGGGTTTCCCGCGCCGCGCCTACGGCAAGT ACCGCGGCGTGGTGGTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSIGAIVSANGSAGAGFPQPELVTIDEGGMRPATFSLGYTLNLKSGDFQLLNSRELGPDAQVVLQVAPGGEQQTLISGMV LQQSVEYSTGGDGSALVVRGADRSSLLNREQRCRVWSDVTDSSMVEQICSSQGLIPRCEATSCVHAETSHSLVQRESDLE LIYRLARRNGYWFWLSYDSSGQAVTAHFQKPPQGERPSLTLSLRAGAANLDELSLLWDVDRPTAVSARQLDLVSLSPNDA SIDRSPLPCMASHSLADLVSEPRIRQLAVPVSDQADLQARAEALLMESGWFVTARATGRLSRLGGVVRPNSVVTLDGVGS RHSGSYLVSRVRHRIDSDDHLMTMDLMRNGWS
Sequences:
>Translated_352_residues MSIGAIVSANGSAGAGFPQPELVTIDEGGMRPATFSLGYTLNLKSGDFQLLNSRELGPDAQVVLQVAPGGEQQTLISGMV LQQSVEYSTGGDGSALVVRGADRSSLLNREQRCRVWSDVTDSSMVEQICSSQGLIPRCEATSCVHAETSHSLVQRESDLE LIYRLARRNGYWFWLSYDSSGQAVTAHFQKPPQGERPSLTLSLRAGAANLDELSLLWDVDRPTAVSARQLDLVSLSPNDA SIDRSPLPCMASHSLADLVSEPRIRQLAVPVSDQADLQARAEALLMESGWFVTARATGRLSRLGGVVRPNSVVTLDGVGS RHSGSYLVSRVRHRIDSDDHLMTMDLMRNGWS >Mature_351_residues SIGAIVSANGSAGAGFPQPELVTIDEGGMRPATFSLGYTLNLKSGDFQLLNSRELGPDAQVVLQVAPGGEQQTLISGMVL QQSVEYSTGGDGSALVVRGADRSSLLNREQRCRVWSDVTDSSMVEQICSSQGLIPRCEATSCVHAETSHSLVQRESDLEL IYRLARRNGYWFWLSYDSSGQAVTAHFQKPPQGERPSLTLSLRAGAANLDELSLLWDVDRPTAVSARQLDLVSLSPNDAS IDRSPLPCMASHSLADLVSEPRIRQLAVPVSDQADLQARAEALLMESGWFVTARATGRLSRLGGVVRPNSVVTLDGVGSR HSGSYLVSRVRHRIDSDDHLMTMDLMRNGWS
Specific function: Unknown
COG id: COG3500
COG function: function code R; Phage protein D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38078; Mature: 37947
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGAIVSANGSAGAGFPQPELVTIDEGGMRPATFSLGYTLNLKSGDFQLLNSRELGPDA CCCCEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEECCCCEEEECCCCCCCCC QVVLQVAPGGEQQTLISGMVLQQSVEYSTGGDGSALVVRGADRSSLLNREQRCRVWSDVT EEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHCHHHHHHHHCCCC DSSMVEQICSSQGLIPRCEATSCVHAETSHSLVQRESDLELIYRLARRNGYWFWLSYDSS HHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHCCCHHHHHHHHHHCCCEEEEEEECCC GQAVTAHFQKPPQGERPSLTLSLRAGAANLDELSLLWDVDRPTAVSARQLDLVSLSPNDA CCEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCC SIDRSPLPCMASHSLADLVSEPRIRQLAVPVSDQADLQARAEALLMESGWFVTARATGRL CCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHEEECCCEEEEECCCCH SRLGGVVRPNSVVTLDGVGSRHSGSYLVSRVRHRIDSDDHLMTMDLMRNGWS HHHCCEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHCCCC >Mature Secondary Structure SIGAIVSANGSAGAGFPQPELVTIDEGGMRPATFSLGYTLNLKSGDFQLLNSRELGPDA CCCEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEECCCCEEEECCCCCCCCC QVVLQVAPGGEQQTLISGMVLQQSVEYSTGGDGSALVVRGADRSSLLNREQRCRVWSDVT EEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHCHHHHHHHHCCCC DSSMVEQICSSQGLIPRCEATSCVHAETSHSLVQRESDLELIYRLARRNGYWFWLSYDSS HHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHCCCHHHHHHHHHHCCCEEEEEEECCC GQAVTAHFQKPPQGERPSLTLSLRAGAANLDELSLLWDVDRPTAVSARQLDLVSLSPNDA CCEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCC SIDRSPLPCMASHSLADLVSEPRIRQLAVPVSDQADLQARAEALLMESGWFVTARATGRL CCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHEEECCCEEEEECCCCH SRLGGVVRPNSVVTLDGVGSRHSGSYLVSRVRHRIDSDDHLMTMDLMRNGWS HHHCCEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA