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The map label for this gene is kamA [H]

Identifier: 118580185

GI number: 118580185

Start: 1895629

End: 1896669

Strand: Reverse

Name: kamA [H]

Synonym: Ppro_1765

Alternate gene names: 118580185

Gene position: 1896669-1895629 (Counterclockwise)

Preceding gene: 118580188

Following gene: 118580172

Centisome position: 47.32

GC content: 57.54

Gene sequence:

>1041_bases
ATGCGATACATCAGATCATCATCAGTAACACTTGAGAATATAACAAAAAAAAGCACTATTGCTGCAGAATTTACGTCGGT
GGCGGCCAGCTATCCGTTCCGGGTATCACCATCCTACGCCAAACTGATCCGCAGAGAGGGGGATGCCATCTGGAAACAGT
GCATTCCTGATTTACGTGAACTGGATGACGCTGGACAGTGCCCCGACCCACTGGCAGAGCATCTGCTCAGCCCCGTGCCC
GGCCTGATTCACCGTTACCCCGACCGCGTGGTGCTGCTCGTTTCCAATCGCTGCCCGGTCTACTGCCGCTTCTGCATGCG
CAAGCGCCACGTGGGGGAGGGGGATGCCCCCATGGACGCCCAAACGCTGAAACAGGCAATGGATTATATCGCCGCCAATC
CGGCAATTCGCGACATAATCCTCTCCGGCGGCGACCCATTGATGCTGGATGACGACTCGCTGCACCACATCCTCCAGCAG
TTACGGGCCATTCCCCATGTAACCATCATTCGCATCGGCACACGCGTTCCGGTAACCTTGCCCGAGCGGGTGACCCCCGA
ACTGTGCACCCTCTTGAAGCGGTTTCACCCCCTGTACATCAACACCCACTTCAACCACCCGGATGAAATCACGCCGTTGT
CGGCCCGGGCCTGCGATCTTTTGGCCGATGCCGGAATCCCATTGGGAAACCAGACGGTTCTGTTGCGCGGGGTAAACGAT
TCCCTGGATACCATGCGTTCCCTGCAGACCGGGCTGCTCTCCCTGCGGGTCAGGCCGTACTATATCCACCAGATGGATCT
GGTCAGGGGTACGGCGCATTTTCGCACCCCGATCGCGACCGGTCTGGAGATCATCAGGGGCTTGCGCGGTCATGTATCGG
GGATGGCGGTGCCGCAGTACGTTATCGACTTACCCGATGGAAAGGGGAAGGTGCCCATACTACCCGACGATGTGGAGCGA
CAGGGGGATTTACTGATTCTGAGGACATACCAGGGGGAGATGGTCAGGTATCGGGATCTGACAACGGTTGCAGATTCATA
A

Upstream 100 bases:

>100_bases
GCTATATTCCACATAACTCACCCGTTTTCAAGTAAATTCCAAGAAAAACCATGCCGCTGCGCCCGGGGTTGCCCCAATCC
GGCCGCCCTGGAAAGAGCTC

Downstream 100 bases:

>100_bases
ATCCAAAACAGAAAAGCCAGAATACTTTTCTGAATTACAGCTCCTCAGGCGTGAAGCTGATTACGTCATCGATCCGTGGA
GCATCGGCGAAGAGCATCAC

Product: lysine 2,3-aminomutase YodO family protein

Products: NA

Alternate protein names: LAM; KAM [H]

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MRYIRSSSVTLENITKKSTIAAEFTSVAASYPFRVSPSYAKLIRREGDAIWKQCIPDLRELDDAGQCPDPLAEHLLSPVP
GLIHRYPDRVVLLVSNRCPVYCRFCMRKRHVGEGDAPMDAQTLKQAMDYIAANPAIRDIILSGGDPLMLDDDSLHHILQQ
LRAIPHVTIIRIGTRVPVTLPERVTPELCTLLKRFHPLYINTHFNHPDEITPLSARACDLLADAGIPLGNQTVLLRGVND
SLDTMRSLQTGLLSLRVRPYYIHQMDLVRGTAHFRTPIATGLEIIRGLRGHVSGMAVPQYVIDLPDGKGKVPILPDDVER
QGDLLILRTYQGEMVRYRDLTTVADS

Sequences:

>Translated_346_residues
MRYIRSSSVTLENITKKSTIAAEFTSVAASYPFRVSPSYAKLIRREGDAIWKQCIPDLRELDDAGQCPDPLAEHLLSPVP
GLIHRYPDRVVLLVSNRCPVYCRFCMRKRHVGEGDAPMDAQTLKQAMDYIAANPAIRDIILSGGDPLMLDDDSLHHILQQ
LRAIPHVTIIRIGTRVPVTLPERVTPELCTLLKRFHPLYINTHFNHPDEITPLSARACDLLADAGIPLGNQTVLLRGVND
SLDTMRSLQTGLLSLRVRPYYIHQMDLVRGTAHFRTPIATGLEIIRGLRGHVSGMAVPQYVIDLPDGKGKVPILPDDVER
QGDLLILRTYQGEMVRYRDLTTVADS
>Mature_346_residues
MRYIRSSSVTLENITKKSTIAAEFTSVAASYPFRVSPSYAKLIRREGDAIWKQCIPDLRELDDAGQCPDPLAEHLLSPVP
GLIHRYPDRVVLLVSNRCPVYCRFCMRKRHVGEGDAPMDAQTLKQAMDYIAANPAIRDIILSGGDPLMLDDDSLHHILQQ
LRAIPHVTIIRIGTRVPVTLPERVTPELCTLLKRFHPLYINTHFNHPDEITPLSARACDLLADAGIPLGNQTVLLRGVND
SLDTMRSLQTGLLSLRVRPYYIHQMDLVRGTAHFRTPIATGLEIIRGLRGHVSGMAVPQYVIDLPDGKGKVPILPDDVER
QGDLLILRTYQGEMVRYRDLTTVADS

Specific function: Catalyzes the interconversion of L-alpha-lysine and L- beta-lysine [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=293, Percent_Identity=36.1774744027304, Blast_Score=176, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022459
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: =5.4.3.2 [H]

Molecular weight: Translated: 38705; Mature: 38705

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYIRSSSVTLENITKKSTIAAEFTSVAASYPFRVSPSYAKLIRREGDAIWKQCIPDLRE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCHHHHHHHCHHHHH
LDDAGQCPDPLAEHLLSPVPGLIHRYPDRVVLLVSNRCPVYCRFCMRKRHVGEGDAPMDA
HCCCCCCCCHHHHHHHCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCH
QTLKQAMDYIAANPAIRDIILSGGDPLMLDDDSLHHILQQLRAIPHVTIIRIGTRVPVTL
HHHHHHHHHHHCCHHHHHHEECCCCEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCC
PERVTPELCTLLKRFHPLYINTHFNHPDEITPLSARACDLLADAGIPLGNQTVLLRGVND
CCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCH
SLDTMRSLQTGLLSLRVRPYYIHQMDLVRGTAHFRTPIATGLEIIRGLRGHVSGMAVPQY
HHHHHHHHHHHHHHEECCEEEEEHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCCEE
VIDLPDGKGKVPILPDDVERQGDLLILRTYQGEMVRYRDLTTVADS
EEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHCCC
>Mature Secondary Structure
MRYIRSSSVTLENITKKSTIAAEFTSVAASYPFRVSPSYAKLIRREGDAIWKQCIPDLRE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCHHHHHHHCHHHHH
LDDAGQCPDPLAEHLLSPVPGLIHRYPDRVVLLVSNRCPVYCRFCMRKRHVGEGDAPMDA
HCCCCCCCCHHHHHHHCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCH
QTLKQAMDYIAANPAIRDIILSGGDPLMLDDDSLHHILQQLRAIPHVTIIRIGTRVPVTL
HHHHHHHHHHHCCHHHHHHEECCCCEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCC
PERVTPELCTLLKRFHPLYINTHFNHPDEITPLSARACDLLADAGIPLGNQTVLLRGVND
CCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCH
SLDTMRSLQTGLLSLRVRPYYIHQMDLVRGTAHFRTPIATGLEIIRGLRGHVSGMAVPQY
HHHHHHHHHHHHHHEECCEEEEEHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCCEE
VIDLPDGKGKVPILPDDVERQGDLLILRTYQGEMVRYRDLTTVADS
EEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10629195 [H]