Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118580159

Identifier: 118580159

GI number: 118580159

Start: 1873351

End: 1873893

Strand: Direct

Name: 118580159

Synonym: Ppro_1739

Alternate gene names: NA

Gene position: 1873351-1873893 (Clockwise)

Preceding gene: 118580158

Following gene: 118580160

Centisome position: 46.74

GC content: 58.01

Gene sequence:

>543_bases
GTGAAGATATCCATCGATCATATAAGTGAAAAACCCCTCGCGCTGCACAGCCAGGAACCGGCTCTGTCGTTTCCGCTCCT
GGCGCAGATGCAGGCCGACGGTACCTGCTCCTTCATTGGTCCCGTCCGCTGCGACGCGACCGTGGTGCGCGAATACGATC
ACGTGCGGGTGACGGGGCGCATCACGGTGCCGGTGGCGCTGGTCTGTTCACGCTGCCTCGTCGACTACGAGTCCCTGCTG
GATTCGTCCTTCACCATCATCTTCAGGAAGGCGACGGCCGAGGAAGGTGTTCTGGAGGAGGAGACCGAACTCAGCGAACA
GGATCTGATCGCATCCTGTTACCATGGCGACGAGATCGACATGACCCACGAGATCGAAGAACAGATTTCCATGGAAGTAC
CCGTTCAGCCGCTCTGCGGCGACAGCTGCAAGGGGCTCTGCCCCGAGTGTGGAACCGACCTGAATCACGACACCTGTTCC
TGCTCAGCCAGCCAGTTTAATTTCAAGTTCAGTGCACTCAAGGATTTCAAGGCGTCCAGATAA

Upstream 100 bases:

>100_bases
CAGGATTCCGGGTAAATAGTCTTGACAAACGGTATCCATTGCATATACTTGCATGCTTTGATTTTACTGTACTATCGCCA
GGCATAATGGAAGCCATCAC

Downstream 100 bases:

>100_bases
CACATACCATGGTGGCGGACGATCCGCTCCACCGGAAAAAGGAGAGACAGCATGGCGGTACCCAAGAAAAAAACATCCAA
ATCACGTAAAAACATGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKISIDHISEKPLALHSQEPALSFPLLAQMQADGTCSFIGPVRCDATVVREYDHVRVTGRITVPVALVCSRCLVDYESLL
DSSFTIIFRKATAEEGVLEEETELSEQDLIASCYHGDEIDMTHEIEEQISMEVPVQPLCGDSCKGLCPECGTDLNHDTCS
CSASQFNFKFSALKDFKASR

Sequences:

>Translated_180_residues
MKISIDHISEKPLALHSQEPALSFPLLAQMQADGTCSFIGPVRCDATVVREYDHVRVTGRITVPVALVCSRCLVDYESLL
DSSFTIIFRKATAEEGVLEEETELSEQDLIASCYHGDEIDMTHEIEEQISMEVPVQPLCGDSCKGLCPECGTDLNHDTCS
CSASQFNFKFSALKDFKASR
>Mature_180_residues
MKISIDHISEKPLALHSQEPALSFPLLAQMQADGTCSFIGPVRCDATVVREYDHVRVTGRITVPVALVCSRCLVDYESLL
DSSFTIIFRKATAEEGVLEEETELSEQDLIASCYHGDEIDMTHEIEEQISMEVPVQPLCGDSCKGLCPECGTDLNHDTCS
CSASQFNFKFSALKDFKASR

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19884; Mature: 19884

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISIDHISEKPLALHSQEPALSFPLLAQMQADGTCSFIGPVRCDATVVREYDHVRVTGR
CEEECCCCCCCCEEECCCCCCCCCCHHEECCCCCCEEEECCCCCCHHEEECCCEEEEEEE
ITVPVALVCSRCLVDYESLLDSSFTIIFRKATAEEGVLEEETELSEQDLIASCYHGDEID
EEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHCCHHHHHHHHCCCCCCC
MTHEIEEQISMEVPVQPLCGDSCKGLCPECGTDLNHDTCSCSASQFNFKFSALKDFKASR
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCC
>Mature Secondary Structure
MKISIDHISEKPLALHSQEPALSFPLLAQMQADGTCSFIGPVRCDATVVREYDHVRVTGR
CEEECCCCCCCCEEECCCCCCCCCCHHEECCCCCCEEEECCCCCCHHEEECCCEEEEEEE
ITVPVALVCSRCLVDYESLLDSSFTIIFRKATAEEGVLEEETELSEQDLIASCYHGDEID
EEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHCCHHHHHHHHCCCCCCC
MTHEIEEQISMEVPVQPLCGDSCKGLCPECGTDLNHDTCSCSASQFNFKFSALKDFKASR
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA