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The map label for this gene is ydiC [H]

Identifier: 118580137

GI number: 118580137

Start: 1842123

End: 1842845

Strand: Reverse

Name: ydiC [H]

Synonym: Ppro_1717

Alternate gene names: 118580137

Gene position: 1842845-1842123 (Counterclockwise)

Preceding gene: 118580143

Following gene: 118580136

Centisome position: 45.98

GC content: 65.28

Gene sequence:

>723_bases
ATGCGTATCCTCAGTATCGACACATCCACATCCCTGGCCAGCGTGGCCCTCGTTGCCGCTGAAAAGCCTCTGGCCGAATC
TGTTTTCATGGCGGACCGCTGCCTGTCCGCCCGTCTCGTGCCGGAAGTCCTGCGCCTGCTGCAGGCTGCCGGCCTGACCG
TCAACGATCTGGACCTGTTCGCCTGCGCCCTGGGGCCCGGTTCCTTCACCGGCGTGCGCGCCGGACTGGCGACCACCCAG
GGGTTTGCCCTGGCAACGGGAAAACCATGCGCCGGCTACTCATCCCTGACGCTTCTGGCCATGAACTTCCCTCTGGCATC
CCTGCCGGTCTGCTCGATGCTGGATGCCCGCAAGAACGAGGTTTACGCCTCCCTCAGCGACTGCTCCACCCCCATTCCCA
CGACGCTGATCGAGGAGTGCGTCCTAGCGCCGGAACGTTTCCTGGACCTTCTGGACGATCAGGTTGAGGGCCCGCTAATC
CTCTGCGGCGATGGCGCGCTGCGCTACCGGGAGCTGATCTCGTCACGCCTGGGGGATCGGGCCCGTTTCGCCCCCTTTCC
CCAGCAGAGCAGCCATGCCGCCAACGGCGCGCTGCTGGCCCTCCAGTGCTACCGCCAGGGCCGGACCCTTTCACCCGAAC
AGCTGCTGCCGGTCTACATCCGCGCCTCGGAGGCTGAATACGCCAAGCTGGACCAGCAGAAACTGCTGCGCAAACGTCAG
TAG

Upstream 100 bases:

>100_bases
TGCGGCTTGTGTTTGCCATGCTTTCACGGTACAACCTAACGAGAATCCAACAGGAGACGCCGGATTCCCAAACCACACCA
TAAGGAAAGTGTTCTTCTCC

Downstream 100 bases:

>100_bases
TTCCAAATAGACATCCTCAGAACCAGGAGGAACGCCATGAAAATCCATGAGTACCAGGCCAAGGATATCCTGGCTGGCTT
CGGCATCGCCATCCCGCGCG

Product: peptidase M22, glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRILSIDTSTSLASVALVAAEKPLAESVFMADRCLSARLVPEVLRLLQAAGLTVNDLDLFACALGPGSFTGVRAGLATTQ
GFALATGKPCAGYSSLTLLAMNFPLASLPVCSMLDARKNEVYASLSDCSTPIPTTLIEECVLAPERFLDLLDDQVEGPLI
LCGDGALRYRELISSRLGDRARFAPFPQQSSHAANGALLALQCYRQGRTLSPEQLLPVYIRASEAEYAKLDQQKLLRKRQ

Sequences:

>Translated_240_residues
MRILSIDTSTSLASVALVAAEKPLAESVFMADRCLSARLVPEVLRLLQAAGLTVNDLDLFACALGPGSFTGVRAGLATTQ
GFALATGKPCAGYSSLTLLAMNFPLASLPVCSMLDARKNEVYASLSDCSTPIPTTLIEECVLAPERFLDLLDDQVEGPLI
LCGDGALRYRELISSRLGDRARFAPFPQQSSHAANGALLALQCYRQGRTLSPEQLLPVYIRASEAEYAKLDQQKLLRKRQ
>Mature_240_residues
MRILSIDTSTSLASVALVAAEKPLAESVFMADRCLSARLVPEVLRLLQAAGLTVNDLDLFACALGPGSFTGVRAGLATTQ
GFALATGKPCAGYSSLTLLAMNFPLASLPVCSMLDARKNEVYASLSDCSTPIPTTLIEECVLAPERFLDLLDDQVEGPLI
LCGDGALRYRELISSRLGDRARFAPFPQQSSHAANGALLALQCYRQGRTLSPEQLLPVYIRASEAEYAKLDQQKLLRKRQ

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=237, Percent_Identity=32.0675105485232, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 25820; Mature: 25820

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILSIDTSTSLASVALVAAEKPLAESVFMADRCLSARLVPEVLRLLQAAGLTVNDLDLF
CEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEE
ACALGPGSFTGVRAGLATTQGFALATGKPCAGYSSLTLLAMNFPLASLPVCSMLDARKNE
EEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCHHHCHHHHHHHHHHHH
VYASLSDCSTPIPTTLIEECVLAPERFLDLLDDQVEGPLILCGDGALRYRELISSRLGDR
HEEEHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCC
ARFAPFPQQSSHAANGALLALQCYRQGRTLSPEQLLPVYIRASEAEYAKLDQQKLLRKRQ
CCCCCCCCCCCCCCCCHHEEEEHHHCCCCCCHHHHCEEEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRILSIDTSTSLASVALVAAEKPLAESVFMADRCLSARLVPEVLRLLQAAGLTVNDLDLF
CEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEE
ACALGPGSFTGVRAGLATTQGFALATGKPCAGYSSLTLLAMNFPLASLPVCSMLDARKNE
EEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCHHHCHHHHHHHHHHHH
VYASLSDCSTPIPTTLIEECVLAPERFLDLLDDQVEGPLILCGDGALRYRELISSRLGDR
HEEEHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCC
ARFAPFPQQSSHAANGALLALQCYRQGRTLSPEQLLPVYIRASEAEYAKLDQQKLLRKRQ
CCCCCCCCCCCCCCCCHHEEEEHHHCCCCCCHHHHCEEEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]