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The map label for this gene is ygxB [H]

Identifier: 118580105

GI number: 118580105

Start: 1808953

End: 1810452

Strand: Reverse

Name: ygxB [H]

Synonym: Ppro_1684

Alternate gene names: 118580105

Gene position: 1810452-1808953 (Counterclockwise)

Preceding gene: 118580118

Following gene: 118580100

Centisome position: 45.17

GC content: 53.27

Gene sequence:

>1500_bases
ATGGAAACGATTCTCAGTCAAATCACACAGATGACCGGTTCATACATCCCTCGTCTCGTCGGAGCGCTGTTGATCATAAT
CATCGGATGGGTGGTTGCCCTGCTTGCATCGGGACTATTTCGCAAGCTCCTGCATCGGATCACACTCAACAGGCATGTCG
CGGAATGGATCAGTACGGACGAGAAGCAACCGCCTCCTGAACTGGAAAACATGATTTCACGGGGTTTGTTTTATCTGATC
ATGCTTTTTGTTCTCGTAGCCACATTCCAGGCGCTGGGAATCACACTCATAACCGAACCGATCAACGGACTCCTCAACGA
ATTATTCAAATTCACTCCGCAGATTCTTGGCGCACTGATCATCGTGGTGGTTGCCTGGGTGACAGCCAAGGTTCTCAAAC
TCGTTGTCGCACGCGGCCTGATCGCGGCCAGATTCGATGAAAAACTGGGTGACAAAACCGGCATGGGTGAAGCACACCTG
GCGCTTTCACAAACAGTGGCCAATGCGGTGTTCTGGCTCGTGATGCTGCTCTTCTGCCCTGCCGTACTGAGCACACTCAA
CTTGGGGGGCCTGCTCAACCCAGTTCAGAACATGTTGACTAAAATTCTGGACTTTCTCCCCAACATCTTTACCGCCGCGA
TTATCCTGCTGATCGGCTGGCTGGTAGCCCGCATTATCCAGAGGATCGTCACGAGCCTGCTGGAAGCTATCGGTTGCGAT
AACCTGAGCGAAAAAGTCGGACTCAACAGGCTGCTCGGCAGCCACAGACTATCGTCGATTCTCGGACTGGTTGCCTATGT
TCTGATCTTCATCCCCATTCTCGTTGCATCGTTGAACACCTTGAGGCTTGATGCGGTAACTCAGCCCGTAAGCAGGATGA
TGGAACTGTTTCTGATGGCTCTTCCCAACCTTTTCGCCGCCGCCCTCATCCTGATCGTCTCCTACGTCGTCGGCAAACTG
TTGTCCGACATGTTGACCAATCTTCTCGAAGGACTGGGTTTCAATGCGGTGCTGGCAAAACTTGGCATCGGCCAGAAAAT
CGTGGAAGGAACCTGGGCTCCCTCGGTGATAACCGGAAAACTGGCCCTGGCAGCAATCATGCTGTTTGCCTCCATAGAGG
CTTCGGAGCGACTTGGGTTCAAGATCGCTTCCATGCTATTCACCCAGTTTACCGTGCTGGCCGGGCATGTCCTGCTGGGG
ATCGTGATTTTCGCCATTGGCCTGCTGCTGGCAAACTTCACCAGCAAGATCATAATCTCCACAACCTCATCCAATCCTCG
GCTGTTCTCCCTGACGGCACGAACCGCGATCATGGTCCTTGCCGGTGCGATGGCGCTGCGTCAGATGGGACTGGCGAACG
AGATCATAAACCTCGCCTTCGGTTTGACCCTGGGTGCCATCGCCATTGCGATCGCGATTGCCTTTGGTTGCGGTGGAAAG
GAAATCGCGGCCAGAGAACTGGACGAATGGATCAGGTCGATGAAAGATACAAAACCGTAA

Upstream 100 bases:

>100_bases
AGTTTCGGAACAGAAGCGAGAGATTACGTTCCCCCATTGACTTCCATTGACCGTATACTATTGTTTTATAATAAACAAAA
ACCACACAGGAGGGTACATC

Downstream 100 bases:

>100_bases
AACTGACGCGCTAATCCGAAAGAAGCAAGAGAGTAAACGCTGTGTATCGACATCAAACTATGATCAAACATATGCCGTGC
AGGCATGCCGCACCCAGAGA

Product: TM helix repeat-containing protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
METILSQITQMTGSYIPRLVGALLIIIIGWVVALLASGLFRKLLHRITLNRHVAEWISTDEKQPPPELENMISRGLFYLI
MLFVLVATFQALGITLITEPINGLLNELFKFTPQILGALIIVVVAWVTAKVLKLVVARGLIAARFDEKLGDKTGMGEAHL
ALSQTVANAVFWLVMLLFCPAVLSTLNLGGLLNPVQNMLTKILDFLPNIFTAAIILLIGWLVARIIQRIVTSLLEAIGCD
NLSEKVGLNRLLGSHRLSSILGLVAYVLIFIPILVASLNTLRLDAVTQPVSRMMELFLMALPNLFAAALILIVSYVVGKL
LSDMLTNLLEGLGFNAVLAKLGIGQKIVEGTWAPSVITGKLALAAIMLFASIEASERLGFKIASMLFTQFTVLAGHVLLG
IVIFAIGLLLANFTSKIIISTTSSNPRLFSLTARTAIMVLAGAMALRQMGLANEIINLAFGLTLGAIAIAIAIAFGCGGK
EIAARELDEWIRSMKDTKP

Sequences:

>Translated_499_residues
METILSQITQMTGSYIPRLVGALLIIIIGWVVALLASGLFRKLLHRITLNRHVAEWISTDEKQPPPELENMISRGLFYLI
MLFVLVATFQALGITLITEPINGLLNELFKFTPQILGALIIVVVAWVTAKVLKLVVARGLIAARFDEKLGDKTGMGEAHL
ALSQTVANAVFWLVMLLFCPAVLSTLNLGGLLNPVQNMLTKILDFLPNIFTAAIILLIGWLVARIIQRIVTSLLEAIGCD
NLSEKVGLNRLLGSHRLSSILGLVAYVLIFIPILVASLNTLRLDAVTQPVSRMMELFLMALPNLFAAALILIVSYVVGKL
LSDMLTNLLEGLGFNAVLAKLGIGQKIVEGTWAPSVITGKLALAAIMLFASIEASERLGFKIASMLFTQFTVLAGHVLLG
IVIFAIGLLLANFTSKIIISTTSSNPRLFSLTARTAIMVLAGAMALRQMGLANEIINLAFGLTLGAIAIAIAIAFGCGGK
EIAARELDEWIRSMKDTKP
>Mature_499_residues
METILSQITQMTGSYIPRLVGALLIIIIGWVVALLASGLFRKLLHRITLNRHVAEWISTDEKQPPPELENMISRGLFYLI
MLFVLVATFQALGITLITEPINGLLNELFKFTPQILGALIIVVVAWVTAKVLKLVVARGLIAARFDEKLGDKTGMGEAHL
ALSQTVANAVFWLVMLLFCPAVLSTLNLGGLLNPVQNMLTKILDFLPNIFTAAIILLIGWLVARIIQRIVTSLLEAIGCD
NLSEKVGLNRLLGSHRLSSILGLVAYVLIFIPILVASLNTLRLDAVTQPVSRMMELFLMALPNLFAAALILIVSYVVGKL
LSDMLTNLLEGLGFNAVLAKLGIGQKIVEGTWAPSVITGKLALAAIMLFASIEASERLGFKIASMLFTQFTVLAGHVLLG
IVIFAIGLLLANFTSKIIISTTSSNPRLFSLTARTAIMVLAGAMALRQMGLANEIINLAFGLTLGAIAIAIAIAFGCGGK
EIAARELDEWIRSMKDTKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008910 [H]

Pfam domain/function: PF05552 TM_helix [H]

EC number: NA

Molecular weight: Translated: 53898; Mature: 53898

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METILSQITQMTGSYIPRLVGALLIIIIGWVVALLASGLFRKLLHRITLNRHVAEWISTD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EKQPPPELENMISRGLFYLIMLFVLVATFQALGITLITEPINGLLNELFKFTPQILGALI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVVVAWVTAKVLKLVVARGLIAARFDEKLGDKTGMGEAHLALSQTVANAVFWLVMLLFCP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVLSTLNLGGLLNPVQNMLTKILDFLPNIFTAAIILLIGWLVARIIQRIVTSLLEAIGCD
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLSEKVGLNRLLGSHRLSSILGLVAYVLIFIPILVASLNTLRLDAVTQPVSRMMELFLMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPNLFAAALILIVSYVVGKLLSDMLTNLLEGLGFNAVLAKLGIGQKIVEGTWAPSVITGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCCCCHHHHHH
LALAAIMLFASIEASERLGFKIASMLFTQFTVLAGHVLLGIVIFAIGLLLANFTSKIIIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
TTSSNPRLFSLTARTAIMVLAGAMALRQMGLANEIINLAFGLTLGAIAIAIAIAFGCGGK
ECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EIAARELDEWIRSMKDTKP
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
METILSQITQMTGSYIPRLVGALLIIIIGWVVALLASGLFRKLLHRITLNRHVAEWISTD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EKQPPPELENMISRGLFYLIMLFVLVATFQALGITLITEPINGLLNELFKFTPQILGALI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVVVAWVTAKVLKLVVARGLIAARFDEKLGDKTGMGEAHLALSQTVANAVFWLVMLLFCP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVLSTLNLGGLLNPVQNMLTKILDFLPNIFTAAIILLIGWLVARIIQRIVTSLLEAIGCD
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NLSEKVGLNRLLGSHRLSSILGLVAYVLIFIPILVASLNTLRLDAVTQPVSRMMELFLMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPNLFAAALILIVSYVVGKLLSDMLTNLLEGLGFNAVLAKLGIGQKIVEGTWAPSVITGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHCCCCCHHHHHH
LALAAIMLFASIEASERLGFKIASMLFTQFTVLAGHVLLGIVIFAIGLLLANFTSKIIIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
TTSSNPRLFSLTARTAIMVLAGAMALRQMGLANEIINLAFGLTLGAIAIAIAIAFGCGGK
ECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EIAARELDEWIRSMKDTKP
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 8144469 [H]