| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579983
Identifier: 118579983
GI number: 118579983
Start: 1664917
End: 1665831
Strand: Direct
Name: 118579983
Synonym: Ppro_1560
Alternate gene names: NA
Gene position: 1664917-1665831 (Clockwise)
Preceding gene: 118579982
Following gene: 118579986
Centisome position: 41.54
GC content: 65.79
Gene sequence:
>915_bases ATGGCGCTAGCGGAGCGCCCCGTGCCGGGGCGGGTCTACTTCTTCCTGGTGCTGACCACCTTCCTGTGGGGTGGCAGCTT CCTGTTCAGCAAGATCGGTCTGCGGGAAATCCCGCCGCTTCTGTTCGTGTTCAGCCGTTTTACCCTGGCGACGATGATCA TGCTGGTGCTGTTCGCCCGGCGGCTGCCGGCCCTGGATCGCACGATCCTCAGGCGTGGCGCCATCGTGGGGGCTGCCTTG GGATTGACCAACATCACCTTTGTCTTCGGCGTCCGGGGTACCAGCATCTCCCGGGCCGGTGTGCTCAACAACCTGTTCGT GCTGTTCATCCCGCTGATCGGCAAACTGATCTGGAAGGAGCGCGTCGGGCGGATCAACCTGGCCGGTCTGGCGCTGGCCG GCGCCGGCATCTGGCTTCTGGCCACCAGCGGCGGAGCCGGGTTCAACCGGGGCGACCTGATCTCGACCCTCTGCGCCCTG TTCATCGCCGTCCACATCATCACCGTCTCCCGGGTCCTGGCCGACGATGATGTCTATCTGGTATCCCTGGTGCAGTTCGC CACGGTTGCGCTCATGTCGGGCGTTGCCCTGCTCTCCTGCCCGGCAGTGCCGGCAGCCGTCAGCGGCGCGGCCCTGTTCT CGGTGGTCTACTGCGCCATCTTCCCCACCGTGGTCTGCTTCACGCTGCAGAACAGCTTCCAGCGCTACGTCACCCCCACC AGGGCGGGGCTGGTCTACACCCTGGACCCGGTCTGGAGCCTCTTGGCCGGATTCCTCGTCCTGGGAGAGCGCCTGCTGGC GCTGGAATGGCTGGGGTGCGCCATGATTTTCCTGGCGGTGCTGATCCCCCTGTTGGCGCGCTATCTGATGGAAACCCGGC TCATGCGCCGCTACTGCCCGCACCGCCTCCCCTGA
Upstream 100 bases:
>100_bases AGTCTGGAGGAACTGGTGCCATGGATTACGGGATGAAATTTTCCTGGCTCTGGTACGGCGCAGGCATGGTCGGGCGTTCC GGCCGGGAGGCGGGTGCAGC
Downstream 100 bases:
>100_bases ATCCCACCAGCCTAAGGCGCAGCTACCTGCTCATGTTCAGGTTGCTGATCTGCTGGAAGCTGTACTCCAGGGTCGTCAGC TGGGCCGGGTTATTGGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MALAERPVPGRVYFFLVLTTFLWGGSFLFSKIGLREIPPLLFVFSRFTLATMIMLVLFARRLPALDRTILRRGAIVGAAL GLTNITFVFGVRGTSISRAGVLNNLFVLFIPLIGKLIWKERVGRINLAGLALAGAGIWLLATSGGAGFNRGDLISTLCAL FIAVHIITVSRVLADDDVYLVSLVQFATVALMSGVALLSCPAVPAAVSGAALFSVVYCAIFPTVVCFTLQNSFQRYVTPT RAGLVYTLDPVWSLLAGFLVLGERLLALEWLGCAMIFLAVLIPLLARYLMETRLMRRYCPHRLP
Sequences:
>Translated_304_residues MALAERPVPGRVYFFLVLTTFLWGGSFLFSKIGLREIPPLLFVFSRFTLATMIMLVLFARRLPALDRTILRRGAIVGAAL GLTNITFVFGVRGTSISRAGVLNNLFVLFIPLIGKLIWKERVGRINLAGLALAGAGIWLLATSGGAGFNRGDLISTLCAL FIAVHIITVSRVLADDDVYLVSLVQFATVALMSGVALLSCPAVPAAVSGAALFSVVYCAIFPTVVCFTLQNSFQRYVTPT RAGLVYTLDPVWSLLAGFLVLGERLLALEWLGCAMIFLAVLIPLLARYLMETRLMRRYCPHRLP >Mature_303_residues ALAERPVPGRVYFFLVLTTFLWGGSFLFSKIGLREIPPLLFVFSRFTLATMIMLVLFARRLPALDRTILRRGAIVGAALG LTNITFVFGVRGTSISRAGVLNNLFVLFIPLIGKLIWKERVGRINLAGLALAGAGIWLLATSGGAGFNRGDLISTLCALF IAVHIITVSRVLADDDVYLVSLVQFATVALMSGVALLSCPAVPAAVSGAALFSVVYCAIFPTVVCFTLQNSFQRYVTPTR AGLVYTLDPVWSLLAGFLVLGERLLALEWLGCAMIFLAVLIPLLARYLMETRLMRRYCPHRLP
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33144; Mature: 33013
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAERPVPGRVYFFLVLTTFLWGGSFLFSKIGLREIPPLLFVFSRFTLATMIMLVLFAR CCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHH RLPALDRTILRRGAIVGAALGLTNITFVFGVRGTSISRAGVLNNLFVLFIPLIGKLIWKE HCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RVGRINLAGLALAGAGIWLLATSGGAGFNRGDLISTLCALFIAVHIITVSRVLADDDVYL HCCCEEHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VSLVQFATVALMSGVALLSCPAVPAAVSGAALFSVVYCAIFPTVVCFTLQNSFQRYVTPT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RAGLVYTLDPVWSLLAGFLVLGERLLALEWLGCAMIFLAVLIPLLARYLMETRLMRRYCP CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HRLP CCCC >Mature Secondary Structure ALAERPVPGRVYFFLVLTTFLWGGSFLFSKIGLREIPPLLFVFSRFTLATMIMLVLFAR CCCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHH RLPALDRTILRRGAIVGAALGLTNITFVFGVRGTSISRAGVLNNLFVLFIPLIGKLIWKE HCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RVGRINLAGLALAGAGIWLLATSGGAGFNRGDLISTLCALFIAVHIITVSRVLADDDVYL HCCCEEHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VSLVQFATVALMSGVALLSCPAVPAAVSGAALFSVVYCAIFPTVVCFTLQNSFQRYVTPT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RAGLVYTLDPVWSLLAGFLVLGERLLALEWLGCAMIFLAVLIPLLARYLMETRLMRRYCP CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HRLP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]