| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579981
Identifier: 118579981
GI number: 118579981
Start: 1663891
End: 1664241
Strand: Direct
Name: 118579981
Synonym: Ppro_1558
Alternate gene names: NA
Gene position: 1663891-1664241 (Clockwise)
Preceding gene: 118579980
Following gene: 118579982
Centisome position: 41.51
GC content: 64.96
Gene sequence:
>351_bases ATGTCACGACATAGCATGATCGACAATATCTTCTCGGCTCTTCCCGAGGCTCTTCCCGAAGAGCTGGTTCAGACCCTGGC GGAGTCGGAGACGGTCCGCATCGAGCGCATCGTCTCCCATGGCCATGCAACTCCCCCCGGGGAGTGGTACGACCAGGAGC GGGACGAGTGGGTACTGCTTCTGTCCGGCGGCGCGGGGCTGCTCTTCGAGGGTGAGGAATCCCCCCGCGGGCTTGAACCG GGCAACTGTCTGCTGATCCCGGCCCATTGCCGGCACCGGGTGGCCTGGACCGCTCAGGGGGTGCGCAGCATCTGGCTGGC GGTTCATTTCCAGGGGGGATCAGCGGCATGA
Upstream 100 bases:
>100_bases CATGGAAGGCCTCCTGAAGCGAAAGAAATGACTAGCTTTTTCAGTATACACAAATGTCCGGCAATTTAAAGCCGGAAGTG CGGGAGGCGGGTGACGGGCA
Downstream 100 bases:
>100_bases GAGGACGTTCGGCACTCTCTCTGGCTGAGCGGCGTCACTGGGTCTTCGATCTGGACGGAACCCTGACCGTTGCGGTGCAT GATTTTGCCCTGATCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Phosphoribosylaminoimidazole Carboxylase ATPase Subunit; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Family Protein; Cupin 2 Barrel; Mannose-6-Phosphate Isomerase; Cupin 2 Barrel-Containing Protein; Lipid A 3-O-Deacylase
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSRHSMIDNIFSALPEALPEELVQTLAESETVRIERIVSHGHATPPGEWYDQERDEWVLLLSGGAGLLFEGEESPRGLEP GNCLLIPAHCRHRVAWTAQGVRSIWLAVHFQGGSAA
Sequences:
>Translated_116_residues MSRHSMIDNIFSALPEALPEELVQTLAESETVRIERIVSHGHATPPGEWYDQERDEWVLLLSGGAGLLFEGEESPRGLEP GNCLLIPAHCRHRVAWTAQGVRSIWLAVHFQGGSAA >Mature_115_residues SRHSMIDNIFSALPEALPEELVQTLAESETVRIERIVSHGHATPPGEWYDQERDEWVLLLSGGAGLLFEGEESPRGLEPG NCLLIPAHCRHRVAWTAQGVRSIWLAVHFQGGSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12795; Mature: 12663
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHSMIDNIFSALPEALPEELVQTLAESETVRIERIVSHGHATPPGEWYDQERDEWVLL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE LSGGAGLLFEGEESPRGLEPGNCLLIPAHCRHRVAWTAQGVRSIWLAVHFQGGSAA EECCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHEEEEEEEECCCCCC >Mature Secondary Structure SRHSMIDNIFSALPEALPEELVQTLAESETVRIERIVSHGHATPPGEWYDQERDEWVLL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE LSGGAGLLFEGEESPRGLEPGNCLLIPAHCRHRVAWTAQGVRSIWLAVHFQGGSAA EECCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA