| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is gltB [H]
Identifier: 118579973
GI number: 118579973
Start: 1653048
End: 1655414
Strand: Reverse
Name: gltB [H]
Synonym: Ppro_1550
Alternate gene names: 118579973
Gene position: 1655414-1653048 (Counterclockwise)
Preceding gene: 118579974
Following gene: 118579972
Centisome position: 41.3
GC content: 63.92
Gene sequence:
>2367_bases ATGGAAAAGACCGAATTACAGGAATGGGAAGACAAATGCATCCAGGAGGAGCCCCCTCCCTGCATGACCGGCTGTCCCAT CCATGTGGATGCCCGGACGTTCGTGAAGCAGGTCGGTCTGGGCAAGTGGGAAGATGCCTTAAAGACCATGGCCAAGACCA TGCCCTTTCCCAGGATCCTGGGGCGAATCTGCGACCACCCCTGCGAGTCGACCTGCCGCCGCAACGAGGTGGGTGAGTCA ATCGCCATCTCCGCCCTGGAGCGGGCCTGCGTGGAGACAGCCCGGGAGAAGGTCAGGGGGGTAATGCTGCCGCGCAAGCA GACCAGGGTGGCCATCATCGGCAGCGGGCTCTCCAGCCTGACCGCAGCCTGGGATCTTGTGCGCAAGGGGTACCAGGTCA CCGTCTTCGAGCCGACGGGGCGCCTGGGCGGGAACCTGTGGAACTACCCGGAATCGGTTCTCCCTCCTGAGGTGATCGCC GGTGAGTTGAAGCTCCTGGAGGAAATCGGCGCCACCATTGAGCTTATGAGCGACATCAGCGGCAGCAGCCGCATCGCCAC CCTGCGCGGTGAGTTCGACGCCCTGTTCGTAGGCCTTGATACGGTGGGCGTCAACAGCAACGGCCTGGAGCGGGACGACA AGGGGTCGGTGTGGTGCAACGTCCTCACCAGGGGAACCAGCATGGAGGGGGTCTTTGCCGGCGGCAACAGCATCCGCAAT GGCCGTCCCTCCCCCATCTACGACGTTCTGGACGGACGCAAGGCAGCCACCTCCATCGACCGCTACACCATGAACATCAA CCTGGAGAACGGCCGCGAGCTGGAGGGGCCCTACCCGTCACGGCTCTACACCAATACCAGCGGCATATCCCCCCTGGCGA GAGTTTCACCTGCCGGCGCGGTTTCGGGATACAGTGCGGAAGAGGCGATATCAGAGGCTGGCCGCTGCATCCAGTGCGAA TGTCTGGAGTGCGTCAAGGTCTGCCTCTACCTGGACCGCAACAACGGCTATCCCAAGAAGTACGCCCGGCAGGTATTCAA CAGTGAGTACGTCATGTTCGGCAGGGCGCACACCAAGAACCTGTTCGTCAATAGCTGCAGCAGCTGCGGCCTGTGCGAGA CCGTCTGCCCCAACAACTTCAACGTGGGCGAGATGATGCAGCGCGAGCGCCGCACCTTCCTGAAGAAGGAGTTCATGCCC CCCTCCTTCCACGAGTTCGCCCTTCTGGACATGGAGTACAGCAACTCCCAGCGCTGCGCCCTCTGCCGTCACGAGCCGGG CAGGGAGGAGAGCGCCTGGCTCTACTTCCCCAGCTGCCAGCTCTCTGCCACCACGCCCTTGGAGATAGAATCCTCCTACG CCTACCTGCGGGAGAAGCTGGAGGGGGGCGTGGGCATCATGCTTGGCTGCTGCGGCGCACCCGCCCGCTGGGCCGGTCGG GACGACCTGTTCCAGGAGGCCCAGGCAACCATCCGGGCCCAGTGGGAACGCATGGGCAGGCCACGGGTGATCACCGCCTG CTCCACCTGCCGCACCCTGTTCCAGGACAACCAGCCAGAGATGGAGACCCACACCCTGTGGGAGCTGATCGGGGAACATG GTCTTCCCCCGGGACACCTGACCAACAACGGCGCCACGGTCTCCATCACCGACCCCTGCATGGCCCGCCACGATGGCGAG ACCCACCGCCAGGTCCGAAGCCTGGCCCGTTCCCTGGGTTTTGCCATCAACGAGCTCCCTTTGAGCGGCGAGAAGGCCGA ATGCTGCGGCTTTGGCGGGCTGATGTTCAACGCCGACCCGGCCCTGGCCAGGGATGTGGTCAGGCACCGCACCACCGCCA TCGACCCGCCCGACACCAGCTACTACCAGCCGACGGTCATGGACAACGACTACCTGGCCTACTGCGCCATGTGCCGGGAC AACCTGGCCGCCGGCGGCAAGCGCACCTCCCACCTGATCGAGCAGCTCTTCCCGGCTGAAGGGTTGGGCGACCCGGCCGG TCGCGGCTGGATCTCCTGGACCGAGCGGCGCCACAACCGTGCCGCTCTCAGGGAGCGCATTCTGAAGCAGCAGGGAGAAC CGGGGGGAGCAGGCGTGGAGGAGCACGACCGTATCACCCTTCTGATGACGGAAGAGGTGCGCAGGACTGCCGACGAGCGA CGGATCCTGGAGAGCGACATCAAACGGGTCATAGACCATGCCGAGACAAGCGGCAGGAAGCTGCACAACGCTACCAGCGG CGTGTACCGCGGTTACCTGAAATTTGGCAACGTGACCTTCTGGGTGGAGTACACGCCAACCGAGGGAGGCTACAGGGTTC ACAACGCCTACTGCCACCGCATGAACATCGTGGGGACCAAACTATGA
Upstream 100 bases:
>100_bases CCTGGATATAAAAAAGAAATAACTTGAATCATATGTAATTGAGGCGAACGTGGCGCCCTGTGCGCCGCGTTCGCCTCCCT TTTCAAGGGGGCAAACTGCC
Downstream 100 bases:
>100_bases ATCTGTCAACGGAAGACCCGCAGGAGTGGACCTGCAGCCTGTGCGGCGCCCAGCTGAAGGTAGCCAAGGTCGGTTTCACC TACATGAAGGGCAACTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NADPH-GOGAT [H]
Number of amino acids: Translated: 788; Mature: 788
Protein sequence:
>788_residues MEKTELQEWEDKCIQEEPPPCMTGCPIHVDARTFVKQVGLGKWEDALKTMAKTMPFPRILGRICDHPCESTCRRNEVGES IAISALERACVETAREKVRGVMLPRKQTRVAIIGSGLSSLTAAWDLVRKGYQVTVFEPTGRLGGNLWNYPESVLPPEVIA GELKLLEEIGATIELMSDISGSSRIATLRGEFDALFVGLDTVGVNSNGLERDDKGSVWCNVLTRGTSMEGVFAGGNSIRN GRPSPIYDVLDGRKAATSIDRYTMNINLENGRELEGPYPSRLYTNTSGISPLARVSPAGAVSGYSAEEAISEAGRCIQCE CLECVKVCLYLDRNNGYPKKYARQVFNSEYVMFGRAHTKNLFVNSCSSCGLCETVCPNNFNVGEMMQRERRTFLKKEFMP PSFHEFALLDMEYSNSQRCALCRHEPGREESAWLYFPSCQLSATTPLEIESSYAYLREKLEGGVGIMLGCCGAPARWAGR DDLFQEAQATIRAQWERMGRPRVITACSTCRTLFQDNQPEMETHTLWELIGEHGLPPGHLTNNGATVSITDPCMARHDGE THRQVRSLARSLGFAINELPLSGEKAECCGFGGLMFNADPALARDVVRHRTTAIDPPDTSYYQPTVMDNDYLAYCAMCRD NLAAGGKRTSHLIEQLFPAEGLGDPAGRGWISWTERRHNRAALRERILKQQGEPGGAGVEEHDRITLLMTEEVRRTADER RILESDIKRVIDHAETSGRKLHNATSGVYRGYLKFGNVTFWVEYTPTEGGYRVHNAYCHRMNIVGTKL
Sequences:
>Translated_788_residues MEKTELQEWEDKCIQEEPPPCMTGCPIHVDARTFVKQVGLGKWEDALKTMAKTMPFPRILGRICDHPCESTCRRNEVGES IAISALERACVETAREKVRGVMLPRKQTRVAIIGSGLSSLTAAWDLVRKGYQVTVFEPTGRLGGNLWNYPESVLPPEVIA GELKLLEEIGATIELMSDISGSSRIATLRGEFDALFVGLDTVGVNSNGLERDDKGSVWCNVLTRGTSMEGVFAGGNSIRN GRPSPIYDVLDGRKAATSIDRYTMNINLENGRELEGPYPSRLYTNTSGISPLARVSPAGAVSGYSAEEAISEAGRCIQCE CLECVKVCLYLDRNNGYPKKYARQVFNSEYVMFGRAHTKNLFVNSCSSCGLCETVCPNNFNVGEMMQRERRTFLKKEFMP PSFHEFALLDMEYSNSQRCALCRHEPGREESAWLYFPSCQLSATTPLEIESSYAYLREKLEGGVGIMLGCCGAPARWAGR DDLFQEAQATIRAQWERMGRPRVITACSTCRTLFQDNQPEMETHTLWELIGEHGLPPGHLTNNGATVSITDPCMARHDGE THRQVRSLARSLGFAINELPLSGEKAECCGFGGLMFNADPALARDVVRHRTTAIDPPDTSYYQPTVMDNDYLAYCAMCRD NLAAGGKRTSHLIEQLFPAEGLGDPAGRGWISWTERRHNRAALRERILKQQGEPGGAGVEEHDRITLLMTEEVRRTADER RILESDIKRVIDHAETSGRKLHNATSGVYRGYLKFGNVTFWVEYTPTEGGYRVHNAYCHRMNIVGTKL >Mature_788_residues MEKTELQEWEDKCIQEEPPPCMTGCPIHVDARTFVKQVGLGKWEDALKTMAKTMPFPRILGRICDHPCESTCRRNEVGES IAISALERACVETAREKVRGVMLPRKQTRVAIIGSGLSSLTAAWDLVRKGYQVTVFEPTGRLGGNLWNYPESVLPPEVIA GELKLLEEIGATIELMSDISGSSRIATLRGEFDALFVGLDTVGVNSNGLERDDKGSVWCNVLTRGTSMEGVFAGGNSIRN GRPSPIYDVLDGRKAATSIDRYTMNINLENGRELEGPYPSRLYTNTSGISPLARVSPAGAVSGYSAEEAISEAGRCIQCE CLECVKVCLYLDRNNGYPKKYARQVFNSEYVMFGRAHTKNLFVNSCSSCGLCETVCPNNFNVGEMMQRERRTFLKKEFMP PSFHEFALLDMEYSNSQRCALCRHEPGREESAWLYFPSCQLSATTPLEIESSYAYLREKLEGGVGIMLGCCGAPARWAGR DDLFQEAQATIRAQWERMGRPRVITACSTCRTLFQDNQPEMETHTLWELIGEHGLPPGHLTNNGATVSITDPCMARHDGE THRQVRSLARSLGFAINELPLSGEKAECCGFGGLMFNADPALARDVVRHRTTAIDPPDTSYYQPTVMDNDYLAYCAMCRD NLAAGGKRTSHLIEQLFPAEGLGDPAGRGWISWTERRHNRAALRERILKQQGEPGGAGVEEHDRITLLMTEEVRRTADER RILESDIKRVIDHAETSGRKLHNATSGVYRGYLKFGNVTFWVEYTPTEGGYRVHNAYCHRMNIVGTKL
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamate synthase family [H]
Homologues:
Organism=Escherichia coli, GI87082180, Length=216, Percent_Identity=30.5555555555556, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1788468, Length=200, Percent_Identity=28.5, Blast_Score=87, Evalue=5e-18, Organism=Escherichia coli, GI1789606, Length=215, Percent_Identity=29.3023255813954, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1788811, Length=204, Percent_Identity=27.9411764705882, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1789243, Length=160, Percent_Identity=28.75, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17570289, Length=222, Percent_Identity=30.6306306306306, Blast_Score=82, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320030, Length=196, Percent_Identity=27.5510204081633, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24665547, Length=195, Percent_Identity=31.7948717948718, Blast_Score=89, Evalue=2e-17, Organism=Drosophila melanogaster, GI24665543, Length=195, Percent_Identity=31.7948717948718, Blast_Score=89, Evalue=2e-17, Organism=Drosophila melanogaster, GI28574881, Length=195, Percent_Identity=31.7948717948718, Blast_Score=89, Evalue=2e-17, Organism=Drosophila melanogaster, GI24665539, Length=195, Percent_Identity=31.7948717948718, Blast_Score=89, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006005 - InterPro: IPR009051 - InterPro: IPR016040 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.4.1.13 [H]
Molecular weight: Translated: 87746; Mature: 87746
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTELQEWEDKCIQEEPPPCMTGCPIHVDARTFVKQVGLGKWEDALKTMAKTMPFPRIL CCCCHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH GRICDHPCESTCRRNEVGESIAISALERACVETAREKVRGVMLPRKQTRVAIIGSGLSSL HHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHH TAAWDLVRKGYQVTVFEPTGRLGGNLWNYPESVLPPEVIAGELKLLEEIGATIELMSDIS HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCC GSSRIATLRGEFDALFVGLDTVGVNSNGLERDDKGSVWCNVLTRGTSMEGVFAGGNSIRN CCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCC GRPSPIYDVLDGRKAATSIDRYTMNINLENGRELEGPYPSRLYTNTSGISPLARVSPAGA CCCCCHHHHHCCCHHHCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCCCC VSGYSAEEAISEAGRCIQCECLECVKVCLYLDRNNGYPKKYARQVFNSEYVMFGRAHTKN CCCCCHHHHHHHCCCEEEHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCEEEEECCCCCH LFVNSCSSCGLCETVCPNNFNVGEMMQRERRTFLKKEFMPPSFHEFALLDMEYSNSQRCA HHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEE LCRHEPGREESAWLYFPSCQLSATTPLEIESSYAYLREKLEGGVGIMLGCCGAPARWAGR EECCCCCCCCCEEEEECCCCCCCCCCCEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCH DDLFQEAQATIRAQWERMGRPRVITACSTCRTLFQDNQPEMETHTLWELIGEHGLPPGHL HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC TNNGATVSITDPCMARHDGETHRQVRSLARSLGFAINELPLSGEKAECCGFGGLMFNADP CCCCCEEEECCCHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEECCCEEECCCH ALARDVVRHRTTAIDPPDTSYYQPTVMDNDYLAYCAMCRDNLAAGGKRTSHLIEQLFPAE HHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC GLGDPAGRGWISWTERRHNRAALRERILKQQGEPGGAGVEEHDRITLLMTEEVRRTADER CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHH RILESDIKRVIDHAETSGRKLHNATSGVYRGYLKFGNVTFWVEYTPTEGGYRVHNAYCHR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCEEEEEEECCCCCCEEEHHHHHHH MNIVGTKL EEECCCCC >Mature Secondary Structure MEKTELQEWEDKCIQEEPPPCMTGCPIHVDARTFVKQVGLGKWEDALKTMAKTMPFPRIL CCCCHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH GRICDHPCESTCRRNEVGESIAISALERACVETAREKVRGVMLPRKQTRVAIIGSGLSSL HHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHH TAAWDLVRKGYQVTVFEPTGRLGGNLWNYPESVLPPEVIAGELKLLEEIGATIELMSDIS HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCC GSSRIATLRGEFDALFVGLDTVGVNSNGLERDDKGSVWCNVLTRGTSMEGVFAGGNSIRN CCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCC GRPSPIYDVLDGRKAATSIDRYTMNINLENGRELEGPYPSRLYTNTSGISPLARVSPAGA CCCCCHHHHHCCCHHHCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCHHHHCCCCCC VSGYSAEEAISEAGRCIQCECLECVKVCLYLDRNNGYPKKYARQVFNSEYVMFGRAHTKN CCCCCHHHHHHHCCCEEEHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCEEEEECCCCCH LFVNSCSSCGLCETVCPNNFNVGEMMQRERRTFLKKEFMPPSFHEFALLDMEYSNSQRCA HHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEE LCRHEPGREESAWLYFPSCQLSATTPLEIESSYAYLREKLEGGVGIMLGCCGAPARWAGR EECCCCCCCCCEEEEECCCCCCCCCCCEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCH DDLFQEAQATIRAQWERMGRPRVITACSTCRTLFQDNQPEMETHTLWELIGEHGLPPGHL HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC TNNGATVSITDPCMARHDGETHRQVRSLARSLGFAINELPLSGEKAECCGFGGLMFNADP CCCCCEEEECCCHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCEECCCEEECCCH ALARDVVRHRTTAIDPPDTSYYQPTVMDNDYLAYCAMCRDNLAAGGKRTSHLIEQLFPAE HHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC GLGDPAGRGWISWTERRHNRAALRERILKQQGEPGGAGVEEHDRITLLMTEEVRRTADER CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHH RILESDIKRVIDHAETSGRKLHNATSGVYRGYLKFGNVTFWVEYTPTEGGYRVHNAYCHR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCEEEEEEECCCCCCEEEHHHHHHH MNIVGTKL EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 11029411 [H]