Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is ubiE [C]

Identifier: 118579971

GI number: 118579971

Start: 1652162

End: 1652839

Strand: Reverse

Name: ubiE [C]

Synonym: Ppro_1548

Alternate gene names: 118579971

Gene position: 1652839-1652162 (Counterclockwise)

Preceding gene: 118579972

Following gene: 118579970

Centisome position: 41.24

GC content: 69.32

Gene sequence:

>678_bases
ATGCACGCCCCTCTCCATGAATCGCCCCTGTTCCGGGAGGCCAGCGGCCCCACCCTTCGCCCCGGCGGGCTGGAGCTCAC
CGACCGGGGCGTCCAGCTCTGCCGCCTGCCCGGCGAGGCGGAACTCCTGGATGTGGGCTGCGGCAGCGGCATCACGGTTC
AGCACCTGCGGGACACCTACGCCTACAGCGTCAGCGGCATCGACATTTCGGAGAAACTGCTGGCCGAGGGAGTGGCGCGC
GACCCGACCCTGCGGCTGGTGCGAGCCCCGGCGGAAGCACTCCCCTTTCCCGACCGGTCGCTGGACGCTATCTTCTGCGA
ATGCGTGCTGTCGCTCCTGGATGATCCGGTGAAGGCCTTGGCCCAGTTCCACCGCACCCTGCGGCCCGGGGGGAAGCTTG
TGATCAGCGACCTGTACCGGCGCCGGGCGCCCCTCAAGTCGGAAACCGGAGGGGAATCCCGCAGCAGCCGGGGCATCGCC
TCCAGCGAGGACATCCAGGGCTGGCTGTTAGCGGGCGGCTTCGACGGCTTGCTGCGCTGGGAGGACCACAGCCGCAAGCT
GACCGAGCTGGCCGCCCAGGTGATGCTGACCCACGGCAGCCTGGAGTGCCTCTCCGGGTTGTGCGACTGCGGGGAGGGGA
AGCCGGGCTACTACCTGCTGGTGACGGATAGGCAGTGA

Upstream 100 bases:

>100_bases
TGCCGGCCTGCGCCGACTGCGGCATGGTGCTGATCTCCGAGGAACTGGTCAACGGCAAGATGGCCGACACCGAGCGGATC
CTGGAGGACAAGTAGGCCAG

Downstream 100 bases:

>100_bases
ACAGGGATCAGGGAACAGGGACGAGTCACAAGTCACAAGTTACGGTCTTTCCGTCACCGTCACCAGTCACGAAAGGAATA
CCATGGATCAGACCCTGATG

Product: type 11 methyltransferase

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; Transcriptional Regulator MerR Family; Methyltransferase Domain Protein; MitM-Related Protein; Biotin Synthesis Protein BioC; Ubiquinone/Menaquinone Biosynthesis Methyltransferase; Staurosporine Biosynthesis Methyltransferase StaMA; UbiE/COQ5 Methyltransferase; UbiE/COQ5 Methyltransferase-Like Protein; UbiE/COQ5 Family Methyltransferase

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MHAPLHESPLFREASGPTLRPGGLELTDRGVQLCRLPGEAELLDVGCGSGITVQHLRDTYAYSVSGIDISEKLLAEGVAR
DPTLRLVRAPAEALPFPDRSLDAIFCECVLSLLDDPVKALAQFHRTLRPGGKLVISDLYRRRAPLKSETGGESRSSRGIA
SSEDIQGWLLAGGFDGLLRWEDHSRKLTELAAQVMLTHGSLECLSGLCDCGEGKPGYYLLVTDRQ

Sequences:

>Translated_225_residues
MHAPLHESPLFREASGPTLRPGGLELTDRGVQLCRLPGEAELLDVGCGSGITVQHLRDTYAYSVSGIDISEKLLAEGVAR
DPTLRLVRAPAEALPFPDRSLDAIFCECVLSLLDDPVKALAQFHRTLRPGGKLVISDLYRRRAPLKSETGGESRSSRGIA
SSEDIQGWLLAGGFDGLLRWEDHSRKLTELAAQVMLTHGSLECLSGLCDCGEGKPGYYLLVTDRQ
>Mature_225_residues
MHAPLHESPLFREASGPTLRPGGLELTDRGVQLCRLPGEAELLDVGCGSGITVQHLRDTYAYSVSGIDISEKLLAEGVAR
DPTLRLVRAPAEALPFPDRSLDAIFCECVLSLLDDPVKALAQFHRTLRPGGKLVISDLYRRRAPLKSETGGESRSSRGIA
SSEDIQGWLLAGGFDGLLRWEDHSRKLTELAAQVMLTHGSLECLSGLCDCGEGKPGYYLLVTDRQ

Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.- [C]

Molecular weight: Translated: 24422; Mature: 24422

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAPLHESPLFREASGPTLRPGGLELTDRGVQLCRLPGEAELLDVGCGSGITVQHLRDTY
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHH
AYSVSGIDISEKLLAEGVARDPTLRLVRAPAEALPFPDRSLDAIFCECVLSLLDDPVKAL
HEEECCCCHHHHHHHCCCCCCCCHHEEECCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHH
AQFHRTLRPGGKLVISDLYRRRAPLKSETGGESRSSRGIASSEDIQGWLLAGGFDGLLRW
HHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE
EDHSRKLTELAAQVMLTHGSLECLSGLCDCGEGKPGYYLLVTDRQ
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MHAPLHESPLFREASGPTLRPGGLELTDRGVQLCRLPGEAELLDVGCGSGITVQHLRDTY
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHH
AYSVSGIDISEKLLAEGVARDPTLRLVRAPAEALPFPDRSLDAIFCECVLSLLDDPVKAL
HEEECCCCHHHHHHHCCCCCCCCHHEEECCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHH
AQFHRTLRPGGKLVISDLYRRRAPLKSETGGESRSSRGIASSEDIQGWLLAGGFDGLLRW
HHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE
EDHSRKLTELAAQVMLTHGSLECLSGLCDCGEGKPGYYLLVTDRQ
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA