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The map label for this gene is tonB [H]

Identifier: 118579960

GI number: 118579960

Start: 1640248

End: 1641033

Strand: Direct

Name: tonB [H]

Synonym: Ppro_1537

Alternate gene names: 118579960

Gene position: 1640248-1641033 (Clockwise)

Preceding gene: 118579933

Following gene: 118579979

Centisome position: 40.92

GC content: 66.28

Gene sequence:

>786_bases
ATGCTCTTTAGTTGCCCGTGCGACAGTCTCCCCGATCCCCGACCGATCATCGTTGATCTGAGTCTCGCCATGCCGGCGGG
TGGGGGAGGGGGGGGCGGTCAGGGGGGCGCTTTCACGGGCGCCATCCGACCATCAGCGGCTCCTGCTACCTCCCGTCCTC
CAGTCCCTGCTGTGCGGCACGGCGCTCCACTACGGGGCCGGGAAACAGTGGTGACCAGAGCAGTTCCGCTCGTTCGTGCC
CTGTCGTCGGTCCAAAAACGCCGCCAGGATGGGGGAGCGCTGACACATGGGGCAGCGGGATCGGTTCTTGTGCTTGCGGC
GGCAAACGATTCCGCTGCCTCCGGCCCGGGTGGAGGTGGCTCAGGGGGGAACGGTACGGGGTCAGCTACTGGCCACGGCT
CCGGTTCGGGAAGTGGATCTGGCAGCGGTTCGGGGAGCGGAGGCGGCGATGGGGCCGGAAGCGCTGCCGTCGGAAGGAGC
GGGAACAGTGTCCAGCTTCAGCGTTCCGGATACCTGGCCGAACATTTCGCCTACATCCGGGAGATCATCCACAGGCGCCT
TACCTATCCCCGCAGGGCGCAGCGGGAAGGGTGGAGCGGAAGGGTGCGGGTCTCCTTCGTTATCCAGGAAGACGGCAGCG
TGAGCGATATCCGCGTTGTGGGGAGCTCCGGATACGATATCCTGGATCAGGGCGCCGTGGAGGCCATACGAAAGTCCGCG
CCCTTTCCCCGGCCTCCGGTCAGTGCGGAGCTCCGCATGCCCATCGTCTACCAGCTGGAACCGTGA

Upstream 100 bases:

>100_bases
AGCAAGGCGGAGGAGTTTTTTGGAGCGAACACCACCTGAAAAAGTCTTTTCCATCCGGACGGCACTGCTGATCTCTCTCG
TGCTCCATGCCTGCCTGCTG

Downstream 100 bases:

>100_bases
CACCTACGTTGAGGGGATCAGCCTGTTGGCCTGCAGCCGTCGGATGACGCTGGGTACCAGCAGCGATCCTGCCGCGCCGA
AACAGGCGCTGCCCACCGAG

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MLFSCPCDSLPDPRPIIVDLSLAMPAGGGGGGGQGGAFTGAIRPSAAPATSRPPVPAVRHGAPLRGRETVVTRAVPLVRA
LSSVQKRRQDGGALTHGAAGSVLVLAAANDSAASGPGGGGSGGNGTGSATGHGSGSGSGSGSGSGSGGGDGAGSAAVGRS
GNSVQLQRSGYLAEHFAYIREIIHRRLTYPRRAQREGWSGRVRVSFVIQEDGSVSDIRVVGSSGYDILDQGAVEAIRKSA
PFPRPPVSAELRMPIVYQLEP

Sequences:

>Translated_261_residues
MLFSCPCDSLPDPRPIIVDLSLAMPAGGGGGGGQGGAFTGAIRPSAAPATSRPPVPAVRHGAPLRGRETVVTRAVPLVRA
LSSVQKRRQDGGALTHGAAGSVLVLAAANDSAASGPGGGGSGGNGTGSATGHGSGSGSGSGSGSGSGGGDGAGSAAVGRS
GNSVQLQRSGYLAEHFAYIREIIHRRLTYPRRAQREGWSGRVRVSFVIQEDGSVSDIRVVGSSGYDILDQGAVEAIRKSA
PFPRPPVSAELRMPIVYQLEP
>Mature_261_residues
MLFSCPCDSLPDPRPIIVDLSLAMPAGGGGGGGQGGAFTGAIRPSAAPATSRPPVPAVRHGAPLRGRETVVTRAVPLVRA
LSSVQKRRQDGGALTHGAAGSVLVLAAANDSAASGPGGGGSGGNGTGSATGHGSGSGSGSGSGSGSGGGDGAGSAAVGRS
GNSVQLQRSGYLAEHFAYIREIIHRRLTYPRRAQREGWSGRVRVSFVIQEDGSVSDIRVVGSSGYDILDQGAVEAIRKSA
PFPRPPVSAELRMPIVYQLEP

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 26128; Mature: 26128

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSCPCDSLPDPRPIIVDLSLAMPAGGGGGGGQGGAFTGAIRPSAAPATSRPPVPAVRH
CEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHC
GAPLRGRETVVTRAVPLVRALSSVQKRRQDGGALTHGAAGSVLVLAAANDSAASGPGGGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEECCCCCCCCCCCCC
SGGNGTGSATGHGSGSGSGSGSGSGSGGGDGAGSAAVGRSGNSVQLQRSGYLAEHFAYIR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHH
EIIHRRLTYPRRAQREGWSGRVRVSFVIQEDGSVSDIRVVGSSGYDILDQGAVEAIRKSA
HHHHHHCCCCHHHHCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCC
PFPRPPVSAELRMPIVYQLEP
CCCCCCCCCEECCCEEEEECC
>Mature Secondary Structure
MLFSCPCDSLPDPRPIIVDLSLAMPAGGGGGGGQGGAFTGAIRPSAAPATSRPPVPAVRH
CEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHC
GAPLRGRETVVTRAVPLVRALSSVQKRRQDGGALTHGAAGSVLVLAAANDSAASGPGGGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEECCCCCCCCCCCCC
SGGNGTGSATGHGSGSGSGSGSGSGSGGGDGAGSAAVGRSGNSVQLQRSGYLAEHFAYIR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHH
EIIHRRLTYPRRAQREGWSGRVRVSFVIQEDGSVSDIRVVGSSGYDILDQGAVEAIRKSA
HHHHHHCCCCHHHHCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCC
PFPRPPVSAELRMPIVYQLEP
CCCCCCCCCEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]