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The map label for this gene is btrV [H]

Identifier: 118579949

GI number: 118579949

Start: 1629940

End: 1630275

Strand: Reverse

Name: btrV [H]

Synonym: Ppro_1526

Alternate gene names: 118579949

Gene position: 1630275-1629940 (Counterclockwise)

Preceding gene: 118579950

Following gene: 118579948

Centisome position: 40.68

GC content: 54.46

Gene sequence:

>336_bases
ATGGAGTTCAAGGCAACAACGGACCAGAACGCGACCATCATAACCATAACCGGCAGGCTTGATGCCGTTACCGCCCCGGA
GTATGAGAAAAAAATACGTGAGCTGATCGACGGCGGAAATCTCCATTTCGTGGTTGACTTTGAACAGCTCGATTACATCA
GCAGCGCCGGGTTGCGGGGGCTGCTGGTAACGGCAAAACTGCTCAAGGCAAAAAAAGGGCAGCTGCGCTTTGCCAACGTC
ACCGGCACCGTCAAAGAGGTATTCGACATCTCCGGTTTCAACTCCATCTTCCAGATGGATTCATCGCTGGCCGCCTCCCT
TGCCGCCCTCTCCTGA

Upstream 100 bases:

>100_bases
GTCGGCGTGACGAGCTGCGTTCGACGGCCAGAACAGATGTAGTCAGTGTAACCGTCCTGATCAAGAGAACCTGACCAACA
GCACGCAAAGGAGAACACCC

Downstream 100 bases:

>100_bases
AGTGCCATGATAGTGGCCACGAAGCACATTGCAGCAAGGGTCGGGAACCTCGACGCGACTAACGCATTCGTGGAACAGTG
CGCCGACCGCTTCGGGCTGG

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MEFKATTDQNATIITITGRLDAVTAPEYEKKIRELIDGGNLHFVVDFEQLDYISSAGLRGLLVTAKLLKAKKGQLRFANV
TGTVKEVFDISGFNSIFQMDSSLAASLAALS

Sequences:

>Translated_111_residues
MEFKATTDQNATIITITGRLDAVTAPEYEKKIRELIDGGNLHFVVDFEQLDYISSAGLRGLLVTAKLLKAKKGQLRFANV
TGTVKEVFDISGFNSIFQMDSSLAASLAALS
>Mature_111_residues
MEFKATTDQNATIITITGRLDAVTAPEYEKKIRELIDGGNLHFVVDFEQLDYISSAGLRGLLVTAKLLKAKKGQLRFANV
TGTVKEVFDISGFNSIFQMDSSLAASLAALS

Specific function: Possible positive regulator of sigma-B activity. Non-phosphorylated BtrV binds to BtrW, preventing its association with an unknown partner(s) that might be sigma-B. When phosphorylated, releases BtrW, which is then free to complex with and inactivate its

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003658
- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 12057; Mature: 12057

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKATTDQNATIITITGRLDAVTAPEYEKKIRELIDGGNLHFVVDFEQLDYISSAGLRG
CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCHH
LLVTAKLLKAKKGQLRFANVTGTVKEVFDISGFNSIFQMDSSLAASLAALS
HHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEFKATTDQNATIITITGRLDAVTAPEYEKKIRELIDGGNLHFVVDFEQLDYISSAGLRG
CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCHH
LLVTAKLLKAKKGQLRFANVTGTVKEVFDISGFNSIFQMDSSLAASLAALS
HHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]