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The map label for this gene is yabB [H]

Identifier: 118579841

GI number: 118579841

Start: 1512815

End: 1513621

Strand: Reverse

Name: yabB [H]

Synonym: Ppro_1417

Alternate gene names: 118579841

Gene position: 1513621-1512815 (Counterclockwise)

Preceding gene: 118579842

Following gene: 118579840

Centisome position: 37.76

GC content: 67.29

Gene sequence:

>807_bases
GTGAGGAGTGAGAAGAAAACGCCGCGCCTGGTCACAGACCACCTGATACCAGTCACCGATCACCAGTCACCAGCGAGTAG
TGATGAGCTGACGCTGGACTCGCTGCGGCGCTTCGACCTGGCTATCGCCCAGCCGCGCCAGGGGTACCGTTTCTCCCTGG
ATGCGCTGCTTCTGGCGGATTTCGTCGCCTGCGCCGATGATGCCCGCCTGGCCGACCTGGGAACCGGCTGCGGCGTGATC
CCGCTGCTCCTCTGCCGCCGCTTCGGGTCGGCAACGGCGGTGGGATTCGAGAGCAACGGTTCCATGGCCCGGCTTGCCGC
GGAAAACGCCCGGCGTAACGGGCTGGAGCAGCGGGCGGCGTTTGTTGAGCGGGATATCCTGGAGCTGCGGCGTCACTACC
CGGTCTCCAGCTTCGACGGAGTCACCGCCAACCCCCCCTTCCGCACCCCCCAGAGCGGCAGGATCAGTCCCCGGGCCGGC
CGGGACACGGCGCGCCACGAGTCAAGCGCCGGCTTGTCCGATTTTCTGGCAACGGCCAAATACCTGGTCAAGCCGGGGGG
CAGGATCTGGTTCGTCCATCTCCCCGAGCGGCTGGCCGAGTTCATCCATGTGGCAGCGGGGCTCAACCTGTCACTGCTGC
GACTGCGCATGGTCCACCCCGACCAGGGCTCGCCGGCCAGGATATTTCTGGCCGAGCTGGCCAAGGGGCGCAAGGGGACA
ACCATGGTGCTCCCGCCGCTGCTGGTACGTCGCCAGGACGGAGCGTACACGGCCGAAGCCGGCCGCATACTGGGGGAAAC
GCCCTGA

Upstream 100 bases:

>100_bases
CTGACCCTGGCCTCCTTCGCGTTCTTCGCCGGTATGCTGGGACGGGAGTGGCTGATGCACAGGAGAACGGCAGTGAACAG
CGGACAGTGAGGAGCGGACA

Downstream 100 bases:

>100_bases
GTGGCTTCGGCGCCCCTTTCCCTTTGCATGCCCGCAAAAGTGTGCTATAGCTCCCCTATTCTTTCCCCAAAGGAGATCTC
CATGAACAGACGAACAATCG

Product: methyltransferase small

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MRSEKKTPRLVTDHLIPVTDHQSPASSDELTLDSLRRFDLAIAQPRQGYRFSLDALLLADFVACADDARLADLGTGCGVI
PLLLCRRFGSATAVGFESNGSMARLAAENARRNGLEQRAAFVERDILELRRHYPVSSFDGVTANPPFRTPQSGRISPRAG
RDTARHESSAGLSDFLATAKYLVKPGGRIWFVHLPERLAEFIHVAAGLNLSLLRLRMVHPDQGSPARIFLAELAKGRKGT
TMVLPPLLVRRQDGAYTAEAGRILGETP

Sequences:

>Translated_268_residues
MRSEKKTPRLVTDHLIPVTDHQSPASSDELTLDSLRRFDLAIAQPRQGYRFSLDALLLADFVACADDARLADLGTGCGVI
PLLLCRRFGSATAVGFESNGSMARLAAENARRNGLEQRAAFVERDILELRRHYPVSSFDGVTANPPFRTPQSGRISPRAG
RDTARHESSAGLSDFLATAKYLVKPGGRIWFVHLPERLAEFIHVAAGLNLSLLRLRMVHPDQGSPARIFLAELAKGRKGT
TMVLPPLLVRRQDGAYTAEAGRILGETP
>Mature_268_residues
MRSEKKTPRLVTDHLIPVTDHQSPASSDELTLDSLRRFDLAIAQPRQGYRFSLDALLLADFVACADDARLADLGTGCGVI
PLLLCRRFGSATAVGFESNGSMARLAAENARRNGLEQRAAFVERDILELRRHYPVSSFDGVTANPPFRTPQSGRISPRAG
RDTARHESSAGLSDFLATAKYLVKPGGRIWFVHLPERLAEFIHVAAGLNLSLLRLRMVHPDQGSPARIFLAELAKGRKGT
TMVLPPLLVRRQDGAYTAEAGRILGETP

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 29333; Mature: 29333

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSEKKTPRLVTDHLIPVTDHQSPASSDELTLDSLRRFDLAIAQPRQGYRFSLDALLLAD
CCCCCCCCCCHHHCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
FVACADDARLADLGTGCGVIPLLLCRRFGSATAVGFESNGSMARLAAENARRNGLEQRAA
HHHHCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHH
FVERDILELRRHYPVSSFDGVTANPPFRTPQSGRISPRAGRDTARHESSAGLSDFLATAK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHH
YLVKPGGRIWFVHLPERLAEFIHVAAGLNLSLLRLRMVHPDQGSPARIFLAELAKGRKGT
HHHCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCC
TMVLPPLLVRRQDGAYTAEAGRILGETP
EEECCHHHEEECCCCEEHHCCCCCCCCC
>Mature Secondary Structure
MRSEKKTPRLVTDHLIPVTDHQSPASSDELTLDSLRRFDLAIAQPRQGYRFSLDALLLAD
CCCCCCCCCCHHHCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
FVACADDARLADLGTGCGVIPLLLCRRFGSATAVGFESNGSMARLAAENARRNGLEQRAA
HHHHCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHH
FVERDILELRRHYPVSSFDGVTANPPFRTPQSGRISPRAGRDTARHESSAGLSDFLATAK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHH
YLVKPGGRIWFVHLPERLAEFIHVAAGLNLSLLRLRMVHPDQGSPARIFLAELAKGRKGT
HHHCCCCEEEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCC
TMVLPPLLVRRQDGAYTAEAGRILGETP
EEECCHHHEEECCCCEEHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]