| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is ycgN [C]
Identifier: 118579801
GI number: 118579801
Start: 1463944
End: 1464261
Strand: Direct
Name: ycgN [C]
Synonym: Ppro_1377
Alternate gene names: 118579801
Gene position: 1463944-1464261 (Clockwise)
Preceding gene: 118579788
Following gene: 118579803
Centisome position: 36.53
GC content: 58.81
Gene sequence:
>318_bases ATGAGCGATACTTTTGATGACGACCAGCAGTGGGATTCCCTCTGCAAGCAGTGCGGCCGCTGCTGCTTCGAAAAACTGGA GGATAGCAGGGGCAGGATCATCTACACCCAGACCGCCTGCCGCTATCTGGACGTGATCACCCGCCGGTGCAAGATCTTTG AGCGCCGCTTCGAGATCAATCCCCACTGCGTCAAGCTTACCCCCGAACTGGTGCCCCAGTTGCACTGGCTCCCCCCGGAC TGCGGTTATTGTCCGAAACCGGAAAAGTTTACCCGAAAAGCCAGCCGCGATCGCCGGAAACGGGGCAGGGGGAAATAG
Upstream 100 bases:
>100_bases AGACCCGCATCATTTTCCACGGTTTTGCCCTGCGACATCTGCCGCTGTTGCCTGAACGGCGGTTCCAAAGCCGGCCTCGC GCCGTTTCATCATCTTTGTC
Downstream 100 bases:
>100_bases GATGGGGGGGGCGCCAGGGGGATCGCCCAAGGCTGGTCCCTGGACCGAGTTCAGACGGCCGGAATGGGGGTGAAGGGGTG GGGGGGCCGGGAGCAAGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSDTFDDDQQWDSLCKQCGRCCFEKLEDSRGRIIYTQTACRYLDVITRRCKIFERRFEINPHCVKLTPELVPQLHWLPPD CGYCPKPEKFTRKASRDRRKRGRGK
Sequences:
>Translated_105_residues MSDTFDDDQQWDSLCKQCGRCCFEKLEDSRGRIIYTQTACRYLDVITRRCKIFERRFEINPHCVKLTPELVPQLHWLPPD CGYCPKPEKFTRKASRDRRKRGRGK >Mature_104_residues SDTFDDDQQWDSLCKQCGRCCFEKLEDSRGRIIYTQTACRYLDVITRRCKIFERRFEINPHCVKLTPELVPQLHWLPPDC GYCPKPEKFTRKASRDRRKRGRGK
Specific function: Unknown
COG id: COG2983
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0260 family [H]
Homologues:
Organism=Escherichia coli, GI145693117, Length=85, Percent_Identity=47.0588235294118, Blast_Score=81, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008228 - InterPro: IPR005358 [H]
Pfam domain/function: PF03692 UPF0153 [H]
EC number: NA
Molecular weight: Translated: 12573; Mature: 12441
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 8.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTFDDDQQWDSLCKQCGRCCFEKLEDSRGRIIYTQTACRYLDVITRRCKIFERRFEIN CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCC PHCVKLTPELVPQLHWLPPDCGYCPKPEKFTRKASRDRRKRGRGK CCCEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDTFDDDQQWDSLCKQCGRCCFEKLEDSRGRIIYTQTACRYLDVITRRCKIFERRFEIN CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCC PHCVKLTPELVPQLHWLPPDCGYCPKPEKFTRKASRDRRKRGRGK CCCEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA