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The map label for this gene is intB [H]

Identifier: 118579743

GI number: 118579743

Start: 1387579

End: 1388715

Strand: Direct

Name: intB [H]

Synonym: Ppro_1315

Alternate gene names: 118579743

Gene position: 1387579-1388715 (Clockwise)

Preceding gene: 118579742

Following gene: 118579744

Centisome position: 34.62

GC content: 58.75

Gene sequence:

>1137_bases
ATGCCAGCCGGGGGGAAGTGGTGGCGCTTCAAGTACCGCTTCGGCGGCAAGGAGAAATTACTTTCCTTCGGCACCTATCC
CGACATCTCCCTTGCGGAAGCGCAGGCGAAGAGGCACGAGGCGCGAAACCAGGTTGCCAACGGTATTGACCCCGGAGCTG
AACGCAAGGAGCTGAAGAGGGCGGAGCAGGAGCAACAGGAGATCGTCGAAAACAGCTTCAAGGTGGTCGCTCGCGAATGG
CACGGGAAGTTTTCCGGCCAATGGTCGCCGGGCCACTCCATGACTACCATGGACCGCTTGGAGCGGGACATATTCCCCTG
GCTGGGGAGCAAGCCAGTTGCTGATGTCAAGCCAGTTGACCTTTTGGCGGTACTGCGCCGGATAGAGGGGAGGGGGGCGC
TGGAGACGGCACACAGAGTCCGAACTATCTGTGGGCAGGTGCTGCGTTATGCTGTGGCTACCGGACGTGCTGAAAGGGAT
TCTGCGGCAGACCTGCGGGGTGCGTTGCCGCCGGTGCGGGAAAAACACCATGCGGCGCTGACCGACCCGAAGGAGGTGGC
CGACCTGCTGAGGGCCATTGATGGCTTCAAGGGAACCTTTCACGTTAAGTGCGCTTTGAAGCTCGCCCCTATGCTATTTG
TCCGTCCCGGCGAGTTGCGGCAAATGGAGTGGGCGGAGATCGACCTTGACGGCGCACAGTGGAACATCCCCGCCGAAAAG
ATGAAGATGAAGCAAGCCCATATCGTGTCGCTCTGCAAACAGGCCGTTGCGATCCTGAAAGAACTGCAGCCATTGACCGG
CGCGGGCCGCTATGTGTTCCTTTGTCACCGTTCACCACTGCGTCCCATGACCAACAATGCAATAAACGCGGCATTCCGTC
GTATGGGGTACACGTCCGATGAAATGACAGGCCACGGATTCCGGGCAATGGCGCGGACGATCCTTGACGAAGTTTTGCAG
GTCCGGCCTGACTTCGTCGAGCACCAACTTGCCCATGTCGTGCGTGATCCGAACGGTCGAGCCTACAACCGGACGGCGCA
TCTCAAAGAACGGCGGAAGATGATGCAGCTTTGGGCTGATTACCTTGATGGATTGAGGGTAGGGGCGAAGGTGATTCCAT
TACGGAATACATCATGA

Upstream 100 bases:

>100_bases
TGGGGTAGATATGGCGCTGACGGACGCTCAGGTGAAGGCGGCAAAGCCGAAAGAGAAGGCGTACAAGCTGACCGATGGTG
ACGGGCTATATTTGTAGGTT

Downstream 100 bases:

>100_bases
AAGGCGAGAGACGTTTGCACTGAGTGATTCTCGAAATGTCTGTGATACTGAGAACTTTGTTTCAAAGTTTCACGGGATAG
GACGGCCATTGGTACCATGT

Product: phage integrase family protein

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MPAGGKWWRFKYRFGGKEKLLSFGTYPDISLAEAQAKRHEARNQVANGIDPGAERKELKRAEQEQQEIVENSFKVVAREW
HGKFSGQWSPGHSMTTMDRLERDIFPWLGSKPVADVKPVDLLAVLRRIEGRGALETAHRVRTICGQVLRYAVATGRAERD
SAADLRGALPPVREKHHAALTDPKEVADLLRAIDGFKGTFHVKCALKLAPMLFVRPGELRQMEWAEIDLDGAQWNIPAEK
MKMKQAHIVSLCKQAVAILKELQPLTGAGRYVFLCHRSPLRPMTNNAINAAFRRMGYTSDEMTGHGFRAMARTILDEVLQ
VRPDFVEHQLAHVVRDPNGRAYNRTAHLKERRKMMQLWADYLDGLRVGAKVIPLRNTS

Sequences:

>Translated_378_residues
MPAGGKWWRFKYRFGGKEKLLSFGTYPDISLAEAQAKRHEARNQVANGIDPGAERKELKRAEQEQQEIVENSFKVVAREW
HGKFSGQWSPGHSMTTMDRLERDIFPWLGSKPVADVKPVDLLAVLRRIEGRGALETAHRVRTICGQVLRYAVATGRAERD
SAADLRGALPPVREKHHAALTDPKEVADLLRAIDGFKGTFHVKCALKLAPMLFVRPGELRQMEWAEIDLDGAQWNIPAEK
MKMKQAHIVSLCKQAVAILKELQPLTGAGRYVFLCHRSPLRPMTNNAINAAFRRMGYTSDEMTGHGFRAMARTILDEVLQ
VRPDFVEHQLAHVVRDPNGRAYNRTAHLKERRKMMQLWADYLDGLRVGAKVIPLRNTS
>Mature_377_residues
PAGGKWWRFKYRFGGKEKLLSFGTYPDISLAEAQAKRHEARNQVANGIDPGAERKELKRAEQEQQEIVENSFKVVAREWH
GKFSGQWSPGHSMTTMDRLERDIFPWLGSKPVADVKPVDLLAVLRRIEGRGALETAHRVRTICGQVLRYAVATGRAERDS
AADLRGALPPVREKHHAALTDPKEVADLLRAIDGFKGTFHVKCALKLAPMLFVRPGELRQMEWAEIDLDGAQWNIPAEKM
KMKQAHIVSLCKQAVAILKELQPLTGAGRYVFLCHRSPLRPMTNNAINAAFRRMGYTSDEMTGHGFRAMARTILDEVLQV
RPDFVEHQLAHVVRDPNGRAYNRTAHLKERRKMMQLWADYLDGLRVGAKVIPLRNTS

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=367, Percent_Identity=35.4223433242507, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI1788690, Length=362, Percent_Identity=34.2541436464088, Blast_Score=211, Evalue=9e-56,
Organism=Escherichia coli, GI1788974, Length=372, Percent_Identity=31.989247311828, Blast_Score=204, Evalue=6e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 42810; Mature: 42679

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAGGKWWRFKYRFGGKEKLLSFGTYPDISLAEAQAKRHEARNQVANGIDPGAERKELKR
CCCCCCEEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AEQEQQEIVENSFKVVAREWHGKFSGQWSPGHSMTTMDRLERDIFPWLGSKPVADVKPVD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
LLAVLRRIEGRGALETAHRVRTICGQVLRYAVATGRAERDSAADLRGALPPVREKHHAAL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHCCCCC
TDPKEVADLLRAIDGFKGTFHVKCALKLAPMLFVRPGELRQMEWAEIDLDGAQWNIPAEK
CCHHHHHHHHHHHHCCCCEEEEEEHHHHCCHHEECCCCCCCCCHHEEECCCCCCCCCHHH
MKMKQAHIVSLCKQAVAILKELQPLTGAGRYVFLCHRSPLRPMTNNAINAAFRRMGYTSD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCC
EMTGHGFRAMARTILDEVLQVRPDFVEHQLAHVVRDPNGRAYNRTAHLKERRKMMQLWAD
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
YLDGLRVGAKVIPLRNTS
HHHHHHHCCEEECCCCCC
>Mature Secondary Structure 
PAGGKWWRFKYRFGGKEKLLSFGTYPDISLAEAQAKRHEARNQVANGIDPGAERKELKR
CCCCCEEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AEQEQQEIVENSFKVVAREWHGKFSGQWSPGHSMTTMDRLERDIFPWLGSKPVADVKPVD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
LLAVLRRIEGRGALETAHRVRTICGQVLRYAVATGRAERDSAADLRGALPPVREKHHAAL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHCCCCC
TDPKEVADLLRAIDGFKGTFHVKCALKLAPMLFVRPGELRQMEWAEIDLDGAQWNIPAEK
CCHHHHHHHHHHHHCCCCEEEEEEHHHHCCHHEECCCCCCCCCHHEEECCCCCCCCCHHH
MKMKQAHIVSLCKQAVAILKELQPLTGAGRYVFLCHRSPLRPMTNNAINAAFRRMGYTSD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCC
EMTGHGFRAMARTILDEVLQVRPDFVEHQLAHVVRDPNGRAYNRTAHLKERRKMMQLWAD
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
YLDGLRVGAKVIPLRNTS
HHHHHHHCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]