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The map label for this gene is sirB [H]

Identifier: 118579727

GI number: 118579727

Start: 1367916

End: 1368299

Strand: Reverse

Name: sirB [H]

Synonym: Ppro_1299

Alternate gene names: 118579727

Gene position: 1368299-1367916 (Counterclockwise)

Preceding gene: 118579728

Following gene: 118579726

Centisome position: 34.14

GC content: 62.76

Gene sequence:

>384_bases
ATGAAAACCGCAATACTGATGATGGCCCACGGCAGCCGCATCGCCGAGGCAAATGACGCCGCCCGCCAGGTGGCGAAGAT
GGTCCAGGAGATGTCCGGTTTCGATATCGTCGAGGTTTCCTTCCGCGAAATGCACGAGCCCAGCATCCAGCAGGGAATCG
ACACCTGCGTTGCCAGGGGGGCTGAACGCATCCTGCTCATGCCCTACTTCCTGTTCATGGGCGCCCATGTGCAGCACGAC
CTGCCCGAGGAGATCGAGGAGGCCAAGAAACGCCACCCCGGCCTGGTCATGGAAATGGGCGGCCACCTGGGTGCGCACCC
CAAGCTGGCCGAGATCGAAAACGAACGCATCGGCGAGGCGCTGGACAGACTGGGGTGGCGCTGA

Upstream 100 bases:

>100_bases
CGTGGAAGGTGGAGGTACGGGGACGTTAAGGGGCTTGTGCGACAGGCCGGGCGATGGTATGCTCCCGGACCTAAATGAAC
GACAAGACAAGCGAGGTCAC

Downstream 100 bases:

>100_bases
TGGATTCCCTGGCGATGAAACCGGAAGAGATCGAGGCGGAGTCCTTCCGCATCATCGACGCCGAGGCCGGCCGGCACGAC
TGGCCCCCGGCAGAATGGCA

Product: cobalamin (vitamin B12) biosynthesis CbiX protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKTAILMMAHGSRIAEANDAARQVAKMVQEMSGFDIVEVSFREMHEPSIQQGIDTCVARGAERILLMPYFLFMGAHVQHD
LPEEIEEAKKRHPGLVMEMGGHLGAHPKLAEIENERIGEALDRLGWR

Sequences:

>Translated_127_residues
MKTAILMMAHGSRIAEANDAARQVAKMVQEMSGFDIVEVSFREMHEPSIQQGIDTCVARGAERILLMPYFLFMGAHVQHD
LPEEIEEAKKRHPGLVMEMGGHLGAHPKLAEIENERIGEALDRLGWR
>Mature_127_residues
MKTAILMMAHGSRIAEANDAARQVAKMVQEMSGFDIVEVSFREMHEPSIQQGIDTCVARGAERILLMPYFLFMGAHVQHD
LPEEIEEAKKRHPGLVMEMGGHLGAHPKLAEIENERIGEALDRLGWR

Specific function: Chelates iron to the siroheme precursor [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. SirB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.4 [H]

Molecular weight: Translated: 14262; Mature: 14262

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAILMMAHGSRIAEANDAARQVAKMVQEMSGFDIVEVSFREMHEPSIQQGIDTCVARG
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCHHHHHHHHHHHCC
AERILLMPYFLFMGAHVQHDLPEEIEEAKKRHPGLVMEMGGHLGAHPKLAEIENERIGEA
HHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHH
LDRLGWR
HHHHCCC
>Mature Secondary Structure
MKTAILMMAHGSRIAEANDAARQVAKMVQEMSGFDIVEVSFREMHEPSIQQGIDTCVARG
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCHHHHHHHHHHHCC
AERILLMPYFLFMGAHVQHDLPEEIEEAKKRHPGLVMEMGGHLGAHPKLAEIENERIGEA
HHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHH
LDRLGWR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA