| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is mutB [H]
Identifier: 118579713
GI number: 118579713
Start: 1345793
End: 1347964
Strand: Reverse
Name: mutB [H]
Synonym: Ppro_1284
Alternate gene names: 118579713
Gene position: 1347964-1345793 (Counterclockwise)
Preceding gene: 118579714
Following gene: 118579712
Centisome position: 33.63
GC content: 62.71
Gene sequence:
>2172_bases ATGAGTTCATTCCCGAATTTCAAGGATATTGCCTACGAACCGCACAGGAAGGTCGTGGACACACAGACCTGGCAGAAGGA GTTCACAGAGTCCGTCGGAGAACCGCCGATCTGGATGACCAACGAGCAGATCCCGGTCAAGGCGCTCTACACCGAGGAGG ACATCAAGGGCATCGAGCACATCGGATCCACCGCCGGTATCGCCCCCAACCTGCGTGGCCCCTACCCCACCATGTACGTG CAGCGCCCCTGGACGATCCGCCAGTACGCCGGTTTCTCCACCGCCGAGGAGAGCAACGCCTTCTACCGCCGCAACCTGGC CATGGGGCAGAAAGGGCTCTCGGTGGCCTTCGACCTGGCCACCCACCGCGGCTATGACTCGGACCATCCCCGGGTGGTGG GAGATGTGGGCAAGGCCGGGGTTGCCGTCGACTCCATCCTGGACGCCGAGATCCTCTTTTCCGGCATCCCGCTGAACAAG ATGTCCGTCTCCATGACCATGAACGGCGCGGTCCTGCCGGTTCTGGCCTTCTACATCGTGGCCGGTCTGGAGCAGGGGGC GCAGCTGGACGAGCTGTCCGGCACGATCCAGAACGACATCCTCAAGGAGTTCATGGTGCGCAACACCTACATCTATGGGC CGGAAGGCTCCATGCGCATCATCGGCGACATCTTTGAGTACACATCCAAATACATGCCCAAGTTCAACAGCATAAGCATC TCCGGCTATCACATGCAGGAAGCCGGCGCCACCGCCGACATCGAGCTGGCCTACACCATCGCCGACGGCCTGGAATACAT CCGCACCGGCATCACCGCCGGCCTGGAGGTGGACAAATTCGCGCCGCGTCTCTCCTTCTTCTGGGCCGAGGGGATGAACT ACTTCATGGAGGTCTCCAAACTGCGTGCCGGTCGACTTTTGTGGGCCAAACTGCTCAAGCAATTCAACCCGAAGAATCCA AAATCCCTGGCCCTGCGCACCCATTCTCAGACCTCGGGGTGGAGCCTCACGGAACAGGATCCCTTTAACAACGTCACCCG CACCTGCCTGGAGGCAATGGCAGCCACCCTGGGGCACACCCAGTCGCTGCACACCAACGCCCTGGACGAGGCCATCGCCC TGCCCACCGACTTCTCGGCCCGCATCGCCCGCAACACCCAGATTTACCTGCAGAGCGAAACTTCCATCTGCAAGGCAATC GACCCCTGGGGCGGCTCCTACTACGTGGAATGGCTGACCGACCAGCTGCGCAAGAAGGCCTGGGCGCACATCGTGGAGGT GGAGTCCCTGGGAGGCATGGCCAAGGCCATTGAGACTGGCCTGCCCAAGATGCGCATCGAAGAGGCGGCGGCCCGCAAAC AGGCCAGGATCGACTCCAAGGCCGAGCCGATCATCGGCGTCAACAAGTTCCGGCTGGAGCAGGAGGATCCCATCGACATC CTCTCCATCGACAACACTGCCGTACGCGAATCCCAGATCGCCCGACTGAAGAAGCTGCGCGCCGAACGGGACAACGCCAA GGTCCAGGGAATCCTGGAGGCCATAACCAGGGCGGCCGAATCCCGGGAGAACGGCAACCTGCTGGAGCTGGCGGTGGAGG CTGCCAAGGCGCGGGCCAGCCTGGGCGAGATATCCGACGCCATGGAGAAAGTCTATCCCCGCCACAAGGCGGTCATCCGC TCCATCTCCGGAATCTACAGCTCCGAGTACGCTGAAAACGAAGAGGTGCAGGAGGTACAGCGCATGTGCGCCGAGTTCGA GGAGCAGGAGGGGCGGCGGCCCCGCATCCTGGTGGCCAAGATGGGACAGGACGGCCACGACCGGGGCGCCAAGGTCATCG CCACCGCCTTCTCCGACCTGGGGTTTGATGTGGATGTGGGTCCGCTGTTCCAGACTCCGGAAGAGACGGCCGACATGGCG GTGGAGAACGACGTGCACGTGGTCGGCTTCAGCTCATTGGCAGCCGGGCACAAGACCCTGCTTCCCCAGCTGGTGGAGGA GCTCAGGAAGCGGGGACGGGGCGATATCCTGGTGCAGATCGGCGGCGTCATCCCGGCCCAGGACTACCAGTACCTGTACG ACCACGGCGCCGACCTGATCTTCGGACCCGGCACGGTCATCCCCATCGCGGCCAGGAAGACCCTGGAGCTGCTCAAGAAA CGACTGGCATGA
Upstream 100 bases:
>100_bases AGTTCCGGGCCGCCGGCGTGGATGACTTCATCCATGTGCGGACCAACTGTTACGAGATGAACAGCAATCTGCAGTGCCGC TACAGGGAGGTTACACAAGC
Downstream 100 bases:
>100_bases AACGGGACGGCACGGACAAAAGCCGGCCCGAATGGGTACCGGAACAGGCGGGCGCCGGCGACGGCTTCACCACCCACGTC ATGGAGGGGATCCACAGCCT
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-alpha [H]
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MSSFPNFKDIAYEPHRKVVDTQTWQKEFTESVGEPPIWMTNEQIPVKALYTEEDIKGIEHIGSTAGIAPNLRGPYPTMYV QRPWTIRQYAGFSTAEESNAFYRRNLAMGQKGLSVAFDLATHRGYDSDHPRVVGDVGKAGVAVDSILDAEILFSGIPLNK MSVSMTMNGAVLPVLAFYIVAGLEQGAQLDELSGTIQNDILKEFMVRNTYIYGPEGSMRIIGDIFEYTSKYMPKFNSISI SGYHMQEAGATADIELAYTIADGLEYIRTGITAGLEVDKFAPRLSFFWAEGMNYFMEVSKLRAGRLLWAKLLKQFNPKNP KSLALRTHSQTSGWSLTEQDPFNNVTRTCLEAMAATLGHTQSLHTNALDEAIALPTDFSARIARNTQIYLQSETSICKAI DPWGGSYYVEWLTDQLRKKAWAHIVEVESLGGMAKAIETGLPKMRIEEAAARKQARIDSKAEPIIGVNKFRLEQEDPIDI LSIDNTAVRESQIARLKKLRAERDNAKVQGILEAITRAAESRENGNLLELAVEAAKARASLGEISDAMEKVYPRHKAVIR SISGIYSSEYAENEEVQEVQRMCAEFEEQEGRRPRILVAKMGQDGHDRGAKVIATAFSDLGFDVDVGPLFQTPEETADMA VENDVHVVGFSSLAAGHKTLLPQLVEELRKRGRGDILVQIGGVIPAQDYQYLYDHGADLIFGPGTVIPIAARKTLELLKK RLA
Sequences:
>Translated_723_residues MSSFPNFKDIAYEPHRKVVDTQTWQKEFTESVGEPPIWMTNEQIPVKALYTEEDIKGIEHIGSTAGIAPNLRGPYPTMYV QRPWTIRQYAGFSTAEESNAFYRRNLAMGQKGLSVAFDLATHRGYDSDHPRVVGDVGKAGVAVDSILDAEILFSGIPLNK MSVSMTMNGAVLPVLAFYIVAGLEQGAQLDELSGTIQNDILKEFMVRNTYIYGPEGSMRIIGDIFEYTSKYMPKFNSISI SGYHMQEAGATADIELAYTIADGLEYIRTGITAGLEVDKFAPRLSFFWAEGMNYFMEVSKLRAGRLLWAKLLKQFNPKNP KSLALRTHSQTSGWSLTEQDPFNNVTRTCLEAMAATLGHTQSLHTNALDEAIALPTDFSARIARNTQIYLQSETSICKAI DPWGGSYYVEWLTDQLRKKAWAHIVEVESLGGMAKAIETGLPKMRIEEAAARKQARIDSKAEPIIGVNKFRLEQEDPIDI LSIDNTAVRESQIARLKKLRAERDNAKVQGILEAITRAAESRENGNLLELAVEAAKARASLGEISDAMEKVYPRHKAVIR SISGIYSSEYAENEEVQEVQRMCAEFEEQEGRRPRILVAKMGQDGHDRGAKVIATAFSDLGFDVDVGPLFQTPEETADMA VENDVHVVGFSSLAAGHKTLLPQLVEELRKRGRGDILVQIGGVIPAQDYQYLYDHGADLIFGPGTVIPIAARKTLELLKK RLA >Mature_722_residues SSFPNFKDIAYEPHRKVVDTQTWQKEFTESVGEPPIWMTNEQIPVKALYTEEDIKGIEHIGSTAGIAPNLRGPYPTMYVQ RPWTIRQYAGFSTAEESNAFYRRNLAMGQKGLSVAFDLATHRGYDSDHPRVVGDVGKAGVAVDSILDAEILFSGIPLNKM SVSMTMNGAVLPVLAFYIVAGLEQGAQLDELSGTIQNDILKEFMVRNTYIYGPEGSMRIIGDIFEYTSKYMPKFNSISIS GYHMQEAGATADIELAYTIADGLEYIRTGITAGLEVDKFAPRLSFFWAEGMNYFMEVSKLRAGRLLWAKLLKQFNPKNPK SLALRTHSQTSGWSLTEQDPFNNVTRTCLEAMAATLGHTQSLHTNALDEAIALPTDFSARIARNTQIYLQSETSICKAID PWGGSYYVEWLTDQLRKKAWAHIVEVESLGGMAKAIETGLPKMRIEEAAARKQARIDSKAEPIIGVNKFRLEQEDPIDIL SIDNTAVRESQIARLKKLRAERDNAKVQGILEAITRAAESRENGNLLELAVEAAKARASLGEISDAMEKVYPRHKAVIRS ISGIYSSEYAENEEVQEVQRMCAEFEEQEGRRPRILVAKMGQDGHDRGAKVIATAFSDLGFDVDVGPLFQTPEETADMAV ENDVHVVGFSSLAAGHKTLLPQLVEELRKRGRGDILVQIGGVIPAQDYQYLYDHGADLIFGPGTVIPIAARKTLELLKKR LA
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=687, Percent_Identity=63.6098981077147, Blast_Score=909, Evalue=0.0, Organism=Escherichia coli, GI1789284, Length=711, Percent_Identity=60.337552742616, Blast_Score=852, Evalue=0.0, Organism=Caenorhabditis elegans, GI25144500, Length=688, Percent_Identity=64.6802325581395, Blast_Score=916, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006159 - InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR006098 [H]
Pfam domain/function: PF02310 B12-binding; PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 80256; Mature: 80125
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFPNFKDIAYEPHRKVVDTQTWQKEFTESVGEPPIWMTNEQIPVKALYTEEDIKGIEH CCCCCCCHHCCCCCCHHHHCHHHHHHHHHHHCCCCCEEECCCCCCEEEECCHHHHHHHHH IGSTAGIAPNLRGPYPTMYVQRPWTIRQYAGFSTAEESNAFYRRNLAMGQKGLSVAFDLA CCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCHHCCHHHHHHHHHCCCCCEEEEEHH THRGYDSDHPRVVGDVGKAGVAVDSILDAEILFSGIPLNKMSVSMTMNGAVLPVLAFYIV HHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHH AGLEQGAQLDELSGTIQNDILKEFMVRNTYIYGPEGSMRIIGDIFEYTSKYMPKFNSISI HHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCCCEEE SGYHMQEAGATADIELAYTIADGLEYIRTGITAGLEVDKFAPRLSFFWAEGMNYFMEVSK ECEEECCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHH LRAGRLLWAKLLKQFNPKNPKSLALRTHSQTSGWSLTEQDPFNNVTRTCLEAMAATLGHT HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC QSLHTNALDEAIALPTDFSARIARNTQIYLQSETSICKAIDPWGGSYYVEWLTDQLRKKA HHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHH WAHIVEVESLGGMAKAIETGLPKMRIEEAAARKQARIDSKAEPIIGVNKFRLEQEDPIDI HHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCCCCEEE LSIDNTAVRESQIARLKKLRAERDNAKVQGILEAITRAAESRENGNLLELAVEAAKARAS EECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LGEISDAMEKVYPRHKAVIRSISGIYSSEYAENEEVQEVQRMCAEFEEQEGRRPRILVAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE MGQDGHDRGAKVIATAFSDLGFDVDVGPLFQTPEETADMAVENDVHVVGFSSLAAGHKTL CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHCCHHHH LPQLVEELRKRGRGDILVQIGGVIPAQDYQYLYDHGADLIFGPGTVIPIAARKTLELLKK HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCEEECCCCEEEHHHHHHHHHHHH RLA HCC >Mature Secondary Structure SSFPNFKDIAYEPHRKVVDTQTWQKEFTESVGEPPIWMTNEQIPVKALYTEEDIKGIEH CCCCCCHHCCCCCCHHHHCHHHHHHHHHHHCCCCCEEECCCCCCEEEECCHHHHHHHHH IGSTAGIAPNLRGPYPTMYVQRPWTIRQYAGFSTAEESNAFYRRNLAMGQKGLSVAFDLA CCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCCCHHCCHHHHHHHHHCCCCCEEEEEHH THRGYDSDHPRVVGDVGKAGVAVDSILDAEILFSGIPLNKMSVSMTMNGAVLPVLAFYIV HHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHH AGLEQGAQLDELSGTIQNDILKEFMVRNTYIYGPEGSMRIIGDIFEYTSKYMPKFNSISI HHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCCCEEE SGYHMQEAGATADIELAYTIADGLEYIRTGITAGLEVDKFAPRLSFFWAEGMNYFMEVSK ECEEECCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHH LRAGRLLWAKLLKQFNPKNPKSLALRTHSQTSGWSLTEQDPFNNVTRTCLEAMAATLGHT HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC QSLHTNALDEAIALPTDFSARIARNTQIYLQSETSICKAIDPWGGSYYVEWLTDQLRKKA HHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHH WAHIVEVESLGGMAKAIETGLPKMRIEEAAARKQARIDSKAEPIIGVNKFRLEQEDPIDI HHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCCCCEEE LSIDNTAVRESQIARLKKLRAERDNAKVQGILEAITRAAESRENGNLLELAVEAAKARAS EECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LGEISDAMEKVYPRHKAVIRSISGIYSSEYAENEEVQEVQRMCAEFEEQEGRRPRILVAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE MGQDGHDRGAKVIATAFSDLGFDVDVGPLFQTPEETADMAVENDVHVVGFSSLAAGHKTL CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHCCHHHH LPQLVEELRKRGRGDILVQIGGVIPAQDYQYLYDHGADLIFGPGTVIPIAARKTLELLKK HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCEEECCCCEEEHHHHHHHHHHHH RLA HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566763; 12949112 [H]