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The map label for this gene is yadH [H]

Identifier: 118579693

GI number: 118579693

Start: 1328283

End: 1329017

Strand: Direct

Name: yadH [H]

Synonym: Ppro_1264

Alternate gene names: 118579693

Gene position: 1328283-1329017 (Clockwise)

Preceding gene: 118579692

Following gene: 118579694

Centisome position: 33.14

GC content: 62.72

Gene sequence:

>735_bases
ATGAACGGGCTGATCGCGGTCTATTACAGGGAACTGCTGATCTTGCGGCGTCGTTTGAAGCGGCAACTGGCCGGCATGGC
GGTCTCGCCGCTCCTCTACCTGGTGGCGTTCGGCTATGCCATGGGGGGCGGCATGATCGTCCAGGGGCGTCCCTACCTGG
AGTTCCTGATTCCCGGCCTGATCGCCATGAACGGCATGAACCAGGCCTTCGGCATTGCCACGGAGATCAACGTGGCCCGT
TTTTACTGGTTCATCTTCGAGGAGTTCCAGTCAGCTCCCATTGGTAACGCCGCCTATGTGGCGGGCGAGGTATTGGCCGG
CATGACCCGGGCCCTGATCGGCGCCCTGGTGGTGATCTGCCTCTGTCTCCCCTTCGGCCTCTCGCTGCATTTCGGCGGGT
GGTTCTGGCTGGCGGTGCTCTGCAACAGCTTTGTCTTCGCCTCCCTGGCCGTAACCATGGCCATGCTGGTCAAGTCCCAT
GCCGACCAGAGCCTGGTCACCAGCTTCGTGATCACCCCCATGGCCTTCCTGGGGGGGACCTTCTTTCCCATCGACCGGAT
GCCGCTCTGGGCGCAGAAACTGCTTTATTTCCTCCCCCTGACCCATGCCTCCGGCGCCATCCGGACCAGCGCCTTCGGCG
GAACCCCCTCCGCGGTCTCCTACCTGATCATGCTGGGGGTGGGGATTGTCTTCTTCTTCGCCGCCCTGAACTCGGTGAAC
CAGGCCAGGGACTGA

Upstream 100 bases:

>100_bases
AGGCAAAGGCGTACGCGGAGAGCCTCCCCAACGAGTTCTCCCTCCGCAGGGTCAACCTGGAGGATGCTTTCCTGGCGCAG
ACCGGAAAGAAGGTGAAGCC

Downstream 100 bases:

>100_bases
AAGGGAGAAAATATGCTGATCGAAACCTGTTACGACGGCGTGGAGATCCACCGGGAGGACCGGATCATCTACGCCAGATT
CCTGCTGCCGCACCAGGTGC

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNGLIAVYYRELLILRRRLKRQLAGMAVSPLLYLVAFGYAMGGGMIVQGRPYLEFLIPGLIAMNGMNQAFGIATEINVAR
FYWFIFEEFQSAPIGNAAYVAGEVLAGMTRALIGALVVICLCLPFGLSLHFGGWFWLAVLCNSFVFASLAVTMAMLVKSH
ADQSLVTSFVITPMAFLGGTFFPIDRMPLWAQKLLYFLPLTHASGAIRTSAFGGTPSAVSYLIMLGVGIVFFFAALNSVN
QARD

Sequences:

>Translated_244_residues
MNGLIAVYYRELLILRRRLKRQLAGMAVSPLLYLVAFGYAMGGGMIVQGRPYLEFLIPGLIAMNGMNQAFGIATEINVAR
FYWFIFEEFQSAPIGNAAYVAGEVLAGMTRALIGALVVICLCLPFGLSLHFGGWFWLAVLCNSFVFASLAVTMAMLVKSH
ADQSLVTSFVITPMAFLGGTFFPIDRMPLWAQKLLYFLPLTHASGAIRTSAFGGTPSAVSYLIMLGVGIVFFFAALNSVN
QARD
>Mature_244_residues
MNGLIAVYYRELLILRRRLKRQLAGMAVSPLLYLVAFGYAMGGGMIVQGRPYLEFLIPGLIAMNGMNQAFGIATEINVAR
FYWFIFEEFQSAPIGNAAYVAGEVLAGMTRALIGALVVICLCLPFGLSLHFGGWFWLAVLCNSFVFASLAVTMAMLVKSH
ADQSLVTSFVITPMAFLGGTFFPIDRMPLWAQKLLYFLPLTHASGAIRTSAFGGTPSAVSYLIMLGVGIVFFFAALNSVN
QARD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=246, Percent_Identity=24.390243902439, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 26593; Mature: 26593

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCC
>Mature Secondary Structure
MNGLIAVYYRELLILRRRLKRQLAGMAVSPLLYLVAFGYAMGGGMIVQGRPYLEFLIPGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHH
IAMNGMNQAFGIATEINVARFYWFIFEEFQSAPIGNAAYVAGEVLAGMTRALIGALVVIC
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LCLPFGLSLHFGGWFWLAVLCNSFVFASLAVTMAMLVKSHADQSLVTSFVITPMAFLGGT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
FFPIDRMPLWAQKLLYFLPLTHASGAIRTSAFGGTPSAVSYLIMLGVGIVFFFAALNSVN
CCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QARD
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]