Click here to switch to the map view.

The map label for this gene is yifB [C]

Identifier: 118579691

GI number: 118579691

Start: 1326404

End: 1327441

Strand: Direct

Name: yifB [C]

Synonym: Ppro_1262

Alternate gene names: 118579691

Gene position: 1326404-1327441 (Clockwise)

Preceding gene: 118579690

Following gene: 118579692

Centisome position: 33.09

GC content: 64.93

Gene sequence:

>1038_bases
ATGAAGAAAACCCCGATGTATCCCTTTGCGGCCATTGTGGGCCAGGAAAAGATGAAGCTGGCCCTGATCCTGAACATCAT
CACCCCCGGGCTCTCCGGGGTACTGATCAGGGGGGAGAAGGGCACGGCGAAGTCCACCGCGGTGCGGGCCCTGGCGGATA
TCCTCCCGGAGATAGAGGTGTACAAAGACGACCCCTTCCAGCTCTCCCCCAGCGATGAGGGCGAGACCGGCCGCGCCATC
AGGGCGATGCTCAATCCCCGGGCTGGCGAGCAGGCCGAACCGCCCAGGACGGTCAAACGCAAGATCCGCGTGGTGGAGTT
GCCGGTGGGCGCCACCGAGGACCGGGTGGTGGGAACCATGGACATGGAGCATGCCCTCAAGAAGGGGGAGAAGCGGATCG
AACCGGGGATCCTGGCCGCGGCCCATCGCGGCATCCTCTACGTGGACGAGGTCAACCTGCTGGACGACCATGTAGTGGAT
GTGCTGCTGGACTCGGCCGCCATGGGGGTGAACACCATCGAGCGCGAGGGGGTCTCCTTCTCCCACCCGGCCCGCTTTAC
CCTGGTGGGAACAATGAATCCCGAAGAGGGGGAGCTGCGTCCCCAGTTGCTGGACCGGTTCGGGCTCTGTGTGAACATCG
AGGGGATCCGCTCGGCCAACGACCGCGTGGCCATCATGGAGCGCCGGGCAGCCTTCGAAAACGACCCCGAGGCGTTTGTC
GAACAGTGGTCCAACGAGTCCCGGGCCCTGGGAGAAAAGATCCTCGCGGCACAGGAGCTGTACCCCGGGGTGACCGTGGA
TAGGGCGCTTCTGTACGAGATCGCCCAGTACTGCCTCGACGTGGGGGTGGACGGCCATCGCGGTGACATCATCATCCTCA
AGACAGCCAGGACCCTGGCCGCCTATGACGGCAGGAGCCAGGTGGAATCGGCTGATATCCAGGCCGCGGCGGAGTTGGCC
CTGCCCCACCGCGTGCGCCGCCAGCCGCTGATGGATATCGCCGACAACGTTCAGGCCCTGCGTGGGAAGGGGAGATAG

Upstream 100 bases:

>100_bases
CGTGAACAACCGCTTTTTCCGGATGAGACTGTATTCGGCGGGTAGCGCCGGTGTTTCCGGAATGAAAAACCACACAGATA
CATGGAAAGGAACCATTTCG

Downstream 100 bases:

>100_bases
CCGCGGTGATACGGATCGAAGAGCTGCAGAAGAGCTACGGTGCCGTCAAGGCCCTGGACGGCGTCACCCTGCATATCGGG
GAGGGGGAACTGTTCGCCTA

Product: magnesium chelatase

Products: ADP; phosphate; Mg-protoporphyrin IX; H+

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MKKTPMYPFAAIVGQEKMKLALILNIITPGLSGVLIRGEKGTAKSTAVRALADILPEIEVYKDDPFQLSPSDEGETGRAI
RAMLNPRAGEQAEPPRTVKRKIRVVELPVGATEDRVVGTMDMEHALKKGEKRIEPGILAAAHRGILYVDEVNLLDDHVVD
VLLDSAAMGVNTIEREGVSFSHPARFTLVGTMNPEEGELRPQLLDRFGLCVNIEGIRSANDRVAIMERRAAFENDPEAFV
EQWSNESRALGEKILAAQELYPGVTVDRALLYEIAQYCLDVGVDGHRGDIIILKTARTLAAYDGRSQVESADIQAAAELA
LPHRVRRQPLMDIADNVQALRGKGR

Sequences:

>Translated_345_residues
MKKTPMYPFAAIVGQEKMKLALILNIITPGLSGVLIRGEKGTAKSTAVRALADILPEIEVYKDDPFQLSPSDEGETGRAI
RAMLNPRAGEQAEPPRTVKRKIRVVELPVGATEDRVVGTMDMEHALKKGEKRIEPGILAAAHRGILYVDEVNLLDDHVVD
VLLDSAAMGVNTIEREGVSFSHPARFTLVGTMNPEEGELRPQLLDRFGLCVNIEGIRSANDRVAIMERRAAFENDPEAFV
EQWSNESRALGEKILAAQELYPGVTVDRALLYEIAQYCLDVGVDGHRGDIIILKTARTLAAYDGRSQVESADIQAAAELA
LPHRVRRQPLMDIADNVQALRGKGR
>Mature_345_residues
MKKTPMYPFAAIVGQEKMKLALILNIITPGLSGVLIRGEKGTAKSTAVRALADILPEIEVYKDDPFQLSPSDEGETGRAI
RAMLNPRAGEQAEPPRTVKRKIRVVELPVGATEDRVVGTMDMEHALKKGEKRIEPGILAAAHRGILYVDEVNLLDDHVVD
VLLDSAAMGVNTIEREGVSFSHPARFTLVGTMNPEEGELRPQLLDRFGLCVNIEGIRSANDRVAIMERRAAFENDPEAFV
EQWSNESRALGEKILAAQELYPGVTVDRALLYEIAQYCLDVGVDGHRGDIIILKTARTLAAYDGRSQVESADIQAAAELA
LPHRVRRQPLMDIADNVQALRGKGR

Specific function: Unknown

COG id: COG1239

COG function: function code H; Mg-chelatase subunit ChlI

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000523 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: 6.6.1.1

Molecular weight: Translated: 37873; Mature: 37873

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTPMYPFAAIVGQEKMKLALILNIITPGLSGVLIRGEKGTAKSTAVRALADILPEIEV
CCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEE
YKDDPFQLSPSDEGETGRAIRAMLNPRAGEQAEPPRTVKRKIRVVELPVGATEDRVVGTM
ECCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCEEEEEECCCCCCCCEEECC
DMEHALKKGEKRIEPGILAAAHRGILYVDEVNLLDDHVVDVLLDSAAMGVNTIEREGVSF
CHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHCCCCC
SHPARFTLVGTMNPEEGELRPQLLDRFGLCVNIEGIRSANDRVAIMERRAAFENDPEAFV
CCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHH
EQWSNESRALGEKILAAQELYPGVTVDRALLYEIAQYCLDVGVDGHRGDIIILKTARTLA
HHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHH
AYDGRSQVESADIQAAAELALPHRVRRQPLMDIADNVQALRGKGR
HCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKTPMYPFAAIVGQEKMKLALILNIITPGLSGVLIRGEKGTAKSTAVRALADILPEIEV
CCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEE
YKDDPFQLSPSDEGETGRAIRAMLNPRAGEQAEPPRTVKRKIRVVELPVGATEDRVVGTM
ECCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCEEEEEECCCCCCCCEEECC
DMEHALKKGEKRIEPGILAAAHRGILYVDEVNLLDDHVVDVLLDSAAMGVNTIEREGVSF
CHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHCCCCC
SHPARFTLVGTMNPEEGELRPQLLDRFGLCVNIEGIRSANDRVAIMERRAAFENDPEAFV
CCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHHH
EQWSNESRALGEKILAAQELYPGVTVDRALLYEIAQYCLDVGVDGHRGDIIILKTARTLA
HHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHH
AYDGRSQVESADIQAAAELALPHRVRRQPLMDIADNVQALRGKGR
HCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; protoporphyrin IX; Mg2+; H2O

Specific reaction: ATP + protoporphyrin IX + Mg2+ + H2O = ADP + phosphate + Mg-protoporphyrin IX + 2 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]