| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is btuB [H]
Identifier: 118579682
GI number: 118579682
Start: 1310568
End: 1312676
Strand: Direct
Name: btuB [H]
Synonym: Ppro_1253
Alternate gene names: 118579682
Gene position: 1310568-1312676 (Clockwise)
Preceding gene: 118579681
Following gene: 118579683
Centisome position: 32.7
GC content: 56.33
Gene sequence:
>2109_bases ATGCGGAAATTGCCTGCATATCTGGGTGTTTTGAGCCTTATCTGTAGTGCCGTGCCCGTTGCGCGGGGTGAAGAGGCATC CCAGGACAGGGAATCCATGAAACACCTGACCATGGAAGAGATCGTGGTGACGGATACGGCGGTTACGGATCCGGCCGCCA CCGTGGTCGGCGTGAAGACCATCGAAAAGGGGAGGAGTACCACCATCCCCGATGTCCTGGAAAACGAGGCCGGGATCGAC ATCAGCAGGAAAGCCCTGGTGGGCGATACGGGCGACACACTGAAGATCAGGGGGCTTTCCGGAAACAGGATCATGTTGAA CATCGACGGAAGATCGGTCAATGCCGCAGGCGTGCAGGGGGGCTATTTCGTCGACTGGAGCACCATTCCCTTGGACAACA TCGAAAAGGTCGAGGTGATCTACGGCGGCGGGTCGGTAAAATACGGAAACAACGCCGGCGGCGGGGTGATCAACGTGATC ACCAAGAAGCCGACGGAAAAACCGACCGTCTCGATGTACGGGAATTTTGGCGCCGGTGACCATATCAGCGACATGCAGAA CTACCGGGTCACCCACACCTACAAGGTCGGCCCCATCGGCTATTCCATCGCCGGCAGTTACCAGCATGCGGATGAGTATC TCTGGAACAACGATTACGAGGCCAAGAACATCGCCGCCAAACTGTATGTCGACATGCCGTTCAGGGGGGAAATGACCCTG GGGATGCAGTACACCGATGTGGATCGTGGTTTCGCGCTTTCCAACAGGCTTTCCAGTAAAATCAATGACCCCAACTATGA CGTTAAAAGAAACGACGCCTATCCTCTCTCCTCCGGAGATTCGTTCTCACCGGGCGCGGGAAACGTAACAACCGCGGGGC CTGGAGCGAACTGGAACAAGACCAAGTATCTCCTTGATTTCGGCTACAAACAGCCCATTGGCACCGCTCTGGTTGAGTTC AAGGCCTACAAGAATCACGAGGACAGGCATGAGAAAAACTACTCCGCAAACTGGATAAACAGCAGCTATAGCAATGGCAA ACTCGTCCTCGATCGGACGGTGAAGTCGGACAGATCCTACGGCGGAAGCCTGGAGCTGTTTGTGCCCATTAGAGATCATG AAATAGCCATTGGAGCGGAGAGGAAGATCATAGCCACGGGCGGACAGGATGTGGATTACGTGGATACCGCCTACGGGGTA AAGGGAACGGTTGCGGACAGCAATGGGGACTCGGCGCACATGTGGGGGATCTATCTCCAGGACAGCTGGAGCGTTACCGA CTCGTTCCTGCTGACTCCCGGGGTCCGCTACGATCTGTACAAGGGACCCACATCGGAAGGCGGCCAACTGGAGGATTATG GCGTCAGCTTCTCCCTGACCGGGACGTACAAGCTTACGGACAGCGACGTGGTTACGGCATCGGTCTACCGGAAATACCTC ACTCCCTCGGCGCCGGACGCGGCCTGGTGGTCGGACGGATATGGCCAATACTATACAAAGGAGCTGAAACTGGAGCGGAA CAACGCCATCGAGATGGCCTATCAGCACAGCTTCTCGCCCAAGGACTACCTTAAACTCTCTGCATACCACTATATGATCG ATGACTACATCAGCCGGTTCTCCCGAACCGACGGCAGGGGGTGCTACAACATTGACAGGGTTCGTCTGACCGGTGTCTCT CTTGAAGGAGCCACCGAGCCCCTGCCGTGGGTTGCGCTACGGGGAAATGTCACCTACCAGAAGAGCAAGAAGAAGGGGGA CAGCATGGATCCTGCCCAGGTTTCCGACGAACTCGAATACCTTCCCGAGTGGAAAGGGAATGCGGGTGTCGATTTTCGGC TCCCCTACGCCGCGACATTCAGCGTGAAGGAGCGGGTGGTGGGTATAACCAAGACCGTTCAATCCTATACGGAGAAGGGG ACGACAACGTATAAACGTCTACAACTCAGTCCACACGCGACAACGGACATCGAACTGCGGGTACCGGTAACGCAACACGG CGAACTCTCCGTCTACTGCGAGAATCTGTTGGACCACCATTACCAGGAGCGCTACGGCTATGCCCTGCCGGGGAGGATCG TGGGAGCCTCGGCCAAGGTGTCATTCTGA
Upstream 100 bases:
>100_bases GTCGACTGACAGGGCACGGTCGGGAAGCGCTCATCGGAAAACTTGTTGTCTTGCATTGCGTTACTATCAATCACGAACAT TTTAAGGGGGGAATAGTGAC
Downstream 100 bases:
>100_bases CCTGGATAGGGAAGGGAGAGGTATGGTGCTGATTGTGATAGGGAAACGTGAAGTGTCACCGGTGCCGAATGTGGGGGGTA ACCGTGTCCTTTGGCCGCAA
Product: TonB-dependent receptor, plug
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 702; Mature: 702
Protein sequence:
>702_residues MRKLPAYLGVLSLICSAVPVARGEEASQDRESMKHLTMEEIVVTDTAVTDPAATVVGVKTIEKGRSTTIPDVLENEAGID ISRKALVGDTGDTLKIRGLSGNRIMLNIDGRSVNAAGVQGGYFVDWSTIPLDNIEKVEVIYGGGSVKYGNNAGGGVINVI TKKPTEKPTVSMYGNFGAGDHISDMQNYRVTHTYKVGPIGYSIAGSYQHADEYLWNNDYEAKNIAAKLYVDMPFRGEMTL GMQYTDVDRGFALSNRLSSKINDPNYDVKRNDAYPLSSGDSFSPGAGNVTTAGPGANWNKTKYLLDFGYKQPIGTALVEF KAYKNHEDRHEKNYSANWINSSYSNGKLVLDRTVKSDRSYGGSLELFVPIRDHEIAIGAERKIIATGGQDVDYVDTAYGV KGTVADSNGDSAHMWGIYLQDSWSVTDSFLLTPGVRYDLYKGPTSEGGQLEDYGVSFSLTGTYKLTDSDVVTASVYRKYL TPSAPDAAWWSDGYGQYYTKELKLERNNAIEMAYQHSFSPKDYLKLSAYHYMIDDYISRFSRTDGRGCYNIDRVRLTGVS LEGATEPLPWVALRGNVTYQKSKKKGDSMDPAQVSDELEYLPEWKGNAGVDFRLPYAATFSVKERVVGITKTVQSYTEKG TTTYKRLQLSPHATTDIELRVPVTQHGELSVYCENLLDHHYQERYGYALPGRIVGASAKVSF
Sequences:
>Translated_702_residues MRKLPAYLGVLSLICSAVPVARGEEASQDRESMKHLTMEEIVVTDTAVTDPAATVVGVKTIEKGRSTTIPDVLENEAGID ISRKALVGDTGDTLKIRGLSGNRIMLNIDGRSVNAAGVQGGYFVDWSTIPLDNIEKVEVIYGGGSVKYGNNAGGGVINVI TKKPTEKPTVSMYGNFGAGDHISDMQNYRVTHTYKVGPIGYSIAGSYQHADEYLWNNDYEAKNIAAKLYVDMPFRGEMTL GMQYTDVDRGFALSNRLSSKINDPNYDVKRNDAYPLSSGDSFSPGAGNVTTAGPGANWNKTKYLLDFGYKQPIGTALVEF KAYKNHEDRHEKNYSANWINSSYSNGKLVLDRTVKSDRSYGGSLELFVPIRDHEIAIGAERKIIATGGQDVDYVDTAYGV KGTVADSNGDSAHMWGIYLQDSWSVTDSFLLTPGVRYDLYKGPTSEGGQLEDYGVSFSLTGTYKLTDSDVVTASVYRKYL TPSAPDAAWWSDGYGQYYTKELKLERNNAIEMAYQHSFSPKDYLKLSAYHYMIDDYISRFSRTDGRGCYNIDRVRLTGVS LEGATEPLPWVALRGNVTYQKSKKKGDSMDPAQVSDELEYLPEWKGNAGVDFRLPYAATFSVKERVVGITKTVQSYTEKG TTTYKRLQLSPHATTDIELRVPVTQHGELSVYCENLLDHHYQERYGYALPGRIVGASAKVSF >Mature_702_residues MRKLPAYLGVLSLICSAVPVARGEEASQDRESMKHLTMEEIVVTDTAVTDPAATVVGVKTIEKGRSTTIPDVLENEAGID ISRKALVGDTGDTLKIRGLSGNRIMLNIDGRSVNAAGVQGGYFVDWSTIPLDNIEKVEVIYGGGSVKYGNNAGGGVINVI TKKPTEKPTVSMYGNFGAGDHISDMQNYRVTHTYKVGPIGYSIAGSYQHADEYLWNNDYEAKNIAAKLYVDMPFRGEMTL GMQYTDVDRGFALSNRLSSKINDPNYDVKRNDAYPLSSGDSFSPGAGNVTTAGPGANWNKTKYLLDFGYKQPIGTALVEF KAYKNHEDRHEKNYSANWINSSYSNGKLVLDRTVKSDRSYGGSLELFVPIRDHEIAIGAERKIIATGGQDVDYVDTAYGV KGTVADSNGDSAHMWGIYLQDSWSVTDSFLLTPGVRYDLYKGPTSEGGQLEDYGVSFSLTGTYKLTDSDVVTASVYRKYL TPSAPDAAWWSDGYGQYYTKELKLERNNAIEMAYQHSFSPKDYLKLSAYHYMIDDYISRFSRTDGRGCYNIDRVRLTGVS LEGATEPLPWVALRGNVTYQKSKKKGDSMDPAQVSDELEYLPEWKGNAGVDFRLPYAATFSVKERVVGITKTVQSYTEKG TTTYKRLQLSPHATTDIELRVPVTQHGELSVYCENLLDHHYQERYGYALPGRIVGASAKVSF
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: COG4206
COG function: function code H; Outer membrane cobalamin receptor protein
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790405, Length=182, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1788478, Length=179, Percent_Identity=30.7262569832402, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010916 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77536; Mature: 77536
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLPAYLGVLSLICSAVPVARGEEASQDRESMKHLTMEEIVVTDTAVTDPAATVVGVKT CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHEEEECCCCCCCCCEEEEEEE IEKGRSTTIPDVLENEAGIDISRKALVGDTGDTLKIRGLSGNRIMLNIDGRSVNAAGVQG HHCCCCCCCCHHHCCCCCCCEECEEEECCCCCEEEEEECCCCEEEEEECCCEEECCCCCC GYFVDWSTIPLDNIEKVEVIYGGGSVKYGNNAGGGVINVITKKPTEKPTVSMYGNFGAGD CEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCC HISDMQNYRVTHTYKVGPIGYSIAGSYQHADEYLWNNDYEAKNIAAKLYVDMPFRGEMTL CHHHHHCCEEEEEEEECCCCEEECCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEE GMQYTDVDRGFALSNRLSSKINDPNYDVKRNDAYPLSSGDSFSPGAGNVTTAGPGANWNK CEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC TKYLLDFGYKQPIGTALVEFKAYKNHEDRHEKNYSANWINSSYSNGKLVLDRTVKSDRSY EEEEEECCCCCCHHHHHEEEHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCC GGSLELFVPIRDHEIAIGAERKIIATGGQDVDYVDTAYGVKGTVADSNGDSAHMWGIYLQ CCEEEEEEEECCCEEEECCCEEEEEECCCCCCEEECCCCCEEEEECCCCCCEEEEEEEEE DSWSVTDSFLLTPGVRYDLYKGPTSEGGQLEDYGVSFSLTGTYKLTDSDVVTASVYRKYL CCCCCCCCEEECCCCEEEEECCCCCCCCCEECCCEEEEEEEEEEECCCCEEEHHHHHHHC TPSAPDAAWWSDGYGQYYTKELKLERNNAIEMAYQHSFSPKDYLKLSAYHYMIDDYISRF CCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCHHHEEEHHHHHHHHHHHHHH SRTDGRGCYNIDRVRLTGVSLEGATEPLPWVALRGNVTYQKSKKKGDSMDPAQVSDELEY HCCCCCCCEEECEEEEEEEEECCCCCCCCEEEEECCEEEECCCCCCCCCCHHHHHHHHHH LPEWKGNAGVDFRLPYAATFSVKERVVGITKTVQSYTEKGTTTYKRLQLSPHATTDIELR CCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEE VPVTQHGELSVYCENLLDHHYQERYGYALPGRIVGASAKVSF ECCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCEEECC >Mature Secondary Structure MRKLPAYLGVLSLICSAVPVARGEEASQDRESMKHLTMEEIVVTDTAVTDPAATVVGVKT CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHEEEECCCCCCCCCEEEEEEE IEKGRSTTIPDVLENEAGIDISRKALVGDTGDTLKIRGLSGNRIMLNIDGRSVNAAGVQG HHCCCCCCCCHHHCCCCCCCEECEEEECCCCCEEEEEECCCCEEEEEECCCEEECCCCCC GYFVDWSTIPLDNIEKVEVIYGGGSVKYGNNAGGGVINVITKKPTEKPTVSMYGNFGAGD CEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCC HISDMQNYRVTHTYKVGPIGYSIAGSYQHADEYLWNNDYEAKNIAAKLYVDMPFRGEMTL CHHHHHCCEEEEEEEECCCCEEECCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEE GMQYTDVDRGFALSNRLSSKINDPNYDVKRNDAYPLSSGDSFSPGAGNVTTAGPGANWNK CEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC TKYLLDFGYKQPIGTALVEFKAYKNHEDRHEKNYSANWINSSYSNGKLVLDRTVKSDRSY EEEEEECCCCCCHHHHHEEEHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCC GGSLELFVPIRDHEIAIGAERKIIATGGQDVDYVDTAYGVKGTVADSNGDSAHMWGIYLQ CCEEEEEEEECCCEEEECCCEEEEEECCCCCCEEECCCCCEEEEECCCCCCEEEEEEEEE DSWSVTDSFLLTPGVRYDLYKGPTSEGGQLEDYGVSFSLTGTYKLTDSDVVTASVYRKYL CCCCCCCCEEECCCCEEEEECCCCCCCCCEECCCEEEEEEEEEEECCCCEEEHHHHHHHC TPSAPDAAWWSDGYGQYYTKELKLERNNAIEMAYQHSFSPKDYLKLSAYHYMIDDYISRF CCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCHHHEEEHHHHHHHHHHHHHH SRTDGRGCYNIDRVRLTGVSLEGATEPLPWVALRGNVTYQKSKKKGDSMDPAQVSDELEY HCCCCCCCEEECEEEEEEEEECCCCCCCCEEEEECCEEEECCCCCCCCCCHHHHHHHHHH LPEWKGNAGVDFRLPYAATFSVKERVVGITKTVQSYTEKGTTTYKRLQLSPHATTDIELR CCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEE VPVTQHGELSVYCENLLDHHYQERYGYALPGRIVGASAKVSF ECCCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA