Click here to switch to the map view.

The map label for this gene is cbiM [H]

Identifier: 118579670

GI number: 118579670

Start: 1298569

End: 1299249

Strand: Reverse

Name: cbiM [H]

Synonym: Ppro_1241

Alternate gene names: 118579670

Gene position: 1299249-1298569 (Counterclockwise)

Preceding gene: 118579671

Following gene: 118579669

Centisome position: 32.42

GC content: 64.17

Gene sequence:

>681_bases
ATGCACATCATGGAAGGTTTTCTGCCTGTTGAACATGCCATCGGATGGAGCGTCGCGTCCGCGCCGGTGGTCGCCTACGG
CCTGTACTCCATAAATAAAAAGATAAAGAAAAATCCGGAACAGCGCATGCTGCTGGGGGTGGCCGCGGCCTTCACCTTCG
TGCTCTCGGCCCTGAAGATGCCTTCCGTCACCGGCAGCTGCTCCCATCCCACCGGCACCGGACTGGGGGCGATACTGTTC
GGACCCTCCGCCGTAGCCCCCATCGGAGCGGTGGTGCTGCTGTTCCAGGCACTGCTTCTGGCCCACGGCGGCCTGACCAC
CCTGGGCGCCAATATCTTCTCCATGGCCATCGTCGGCCCCTTCGCCGCCGCCGCCGTCTTCCGTCTGGCCCGCGCGGCCC
GGTTCCCCTTCGGCGTAGGGGTTTTCCTGGCAGCCTCCCTGGGCGACCTTTTAACCTACGTCACCACGGCCTGCCAGCTG
GCCTTCGCCTTTCCCGACCCGGTGGGCGGCTTCACGGCATCCCTGGCCAAGTTCGCCGGCGTATTCGCCCTGACCCAGAT
CCCCCTGGCCATCAGCGAGGGGCTTTTGACCGTGGTGGTGATGAACGCCCTCCTGCGCTTCAACCGGGAAGAGTTGGGCA
GCCTGAATATCGAGGGAAACGGACAGGAGGTGCAGGCATGA

Upstream 100 bases:

>100_bases
TTCGGACTGACCAAGCCAGAGGATGACGTGGCCGTACTGTACGGCATCGTCCTCAAATTCTGAATACAGCCGTACACGCA
GCACCCAAAGGAGAAACATC

Downstream 100 bases:

>100_bases
AACGCTATCAGAACCTGATCCTGCTGGCCCTGGTGGCGCTCTTGGTGGCAGTGCCGCTCTGGATGGTGAAGCGTCCCGCG
CCGGGGCCGGACGGGGCCGA

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MHIMEGFLPVEHAIGWSVASAPVVAYGLYSINKKIKKNPEQRMLLGVAAAFTFVLSALKMPSVTGSCSHPTGTGLGAILF
GPSAVAPIGAVVLLFQALLLAHGGLTTLGANIFSMAIVGPFAAAAVFRLARAARFPFGVGVFLAASLGDLLTYVTTACQL
AFAFPDPVGGFTASLAKFAGVFALTQIPLAISEGLLTVVVMNALLRFNREELGSLNIEGNGQEVQA

Sequences:

>Translated_226_residues
MHIMEGFLPVEHAIGWSVASAPVVAYGLYSINKKIKKNPEQRMLLGVAAAFTFVLSALKMPSVTGSCSHPTGTGLGAILF
GPSAVAPIGAVVLLFQALLLAHGGLTTLGANIFSMAIVGPFAAAAVFRLARAARFPFGVGVFLAASLGDLLTYVTTACQL
AFAFPDPVGGFTASLAKFAGVFALTQIPLAISEGLLTVVVMNALLRFNREELGSLNIEGNGQEVQA
>Mature_226_residues
MHIMEGFLPVEHAIGWSVASAPVVAYGLYSINKKIKKNPEQRMLLGVAAAFTFVLSALKMPSVTGSCSHPTGTGLGAILF
GPSAVAPIGAVVLLFQALLLAHGGLTTLGANIFSMAIVGPFAAAAVFRLARAARFPFGVGVFLAASLGDLLTYVTTACQL
AFAFPDPVGGFTASLAKFAGVFALTQIPLAISEGLLTVVVMNALLRFNREELGSLNIEGNGQEVQA

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 23364; Mature: 23364

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIMEGFLPVEHAIGWSVASAPVVAYGLYSINKKIKKNPEQRMLLGVAAAFTFVLSALKM
CCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
PSVTGSCSHPTGTGLGAILFGPSAVAPIGAVVLLFQALLLAHGGLTTLGANIFSMAIVGP
CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FAAAAVFRLARAARFPFGVGVFLAASLGDLLTYVTTACQLAFAFPDPVGGFTASLAKFAG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VFALTQIPLAISEGLLTVVVMNALLRFNREELGSLNIEGNGQEVQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MHIMEGFLPVEHAIGWSVASAPVVAYGLYSINKKIKKNPEQRMLLGVAAAFTFVLSALKM
CCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
PSVTGSCSHPTGTGLGAILFGPSAVAPIGAVVLLFQALLLAHGGLTTLGANIFSMAIVGP
CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FAAAAVFRLARAARFPFGVGVFLAASLGDLLTYVTTACQLAFAFPDPVGGFTASLAKFAG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VFALTQIPLAISEGLLTVVVMNALLRFNREELGSLNIEGNGQEVQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]