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The map label for this gene is cbiM [H]

Identifier: 118579655

GI number: 118579655

Start: 1279923

End: 1280603

Strand: Reverse

Name: cbiM [H]

Synonym: Ppro_1226

Alternate gene names: 118579655

Gene position: 1280603-1279923 (Counterclockwise)

Preceding gene: 118579656

Following gene: 118579654

Centisome position: 31.95

GC content: 64.02

Gene sequence:

>681_bases
ATGCACATCATGGAAGGTTTTCTGCCTGTTGAACATGCCATCGGATGGAGCGTCGCGTCCGCGCCTGTGGTCGCCTACGG
CCTGTACTCCATAAATAAAAAGATCAATAAAAATCCGGAACAGCGCATGCTGCTGGGGGTGGCCGCGGCCTTCACCTTCG
TGCTCTCGGCCCTGAAGATGCCTTCCGTCACCGGCAGCTGCTCCCATCCCACCGGCACCGGACTGGGGGCGATACTGTTC
GGACCCTCCGCCGTAGCCCCCATCGGAGCGGTGGTGCTGCTGTTCCAGGCACTGCTTCTGGCCCACGGCGGCCTGACCAC
CCTGGGCGCCAATATCTTCTCCATGGCCATCGTCGGCCCCTTCGCCGCCGCCGCCGTCTTCCGTCTGGCCCGCGCGGCCC
GGTTCCCCTTCGGCGTAGGGGTTTTCCTGGCAGCCTCCCTGGGCGACCTTTTAACCTACGTCACCACGGCCTGCCAGCTG
GCCTTCGCCTTTCCCGACCCGGTGGGCGGCTTCACGGCATCCCTGGCCAAGTTCGCCGGCGTATTCGCCCTGACCCAGAT
CCCCCTGGCCATCAGCGAGGGGCTTTTGACCGTGGTGGTGATGAACGCCCTCCTGCGCTTCAACCGGGAAGAGTTGGGCA
GCCTGAATATCGAGGGAAACGGACAGGAGGTGCAGGCATGA

Upstream 100 bases:

>100_bases
GAATCCACAAGGACCTTTGAATACGGAAAGTCCGCATGCTGCTTGCAGATGCGGACTTTTTTTATGGCGTTTGCCGCGTT
GCACGGAAAGGAGAAACATC

Downstream 100 bases:

>100_bases
AACGCTATCAGAACCTGATCCTGCTGGCCCTGGTGGCGCTCTTGGTGGCAGTGCCGCTCTGGATGGTGAAGCGCCCCGCG
CCGGGGCCGGACGGAGCCGA

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MHIMEGFLPVEHAIGWSVASAPVVAYGLYSINKKINKNPEQRMLLGVAAAFTFVLSALKMPSVTGSCSHPTGTGLGAILF
GPSAVAPIGAVVLLFQALLLAHGGLTTLGANIFSMAIVGPFAAAAVFRLARAARFPFGVGVFLAASLGDLLTYVTTACQL
AFAFPDPVGGFTASLAKFAGVFALTQIPLAISEGLLTVVVMNALLRFNREELGSLNIEGNGQEVQA

Sequences:

>Translated_226_residues
MHIMEGFLPVEHAIGWSVASAPVVAYGLYSINKKINKNPEQRMLLGVAAAFTFVLSALKMPSVTGSCSHPTGTGLGAILF
GPSAVAPIGAVVLLFQALLLAHGGLTTLGANIFSMAIVGPFAAAAVFRLARAARFPFGVGVFLAASLGDLLTYVTTACQL
AFAFPDPVGGFTASLAKFAGVFALTQIPLAISEGLLTVVVMNALLRFNREELGSLNIEGNGQEVQA
>Mature_226_residues
MHIMEGFLPVEHAIGWSVASAPVVAYGLYSINKKINKNPEQRMLLGVAAAFTFVLSALKMPSVTGSCSHPTGTGLGAILF
GPSAVAPIGAVVLLFQALLLAHGGLTTLGANIFSMAIVGPFAAAAVFRLARAARFPFGVGVFLAASLGDLLTYVTTACQL
AFAFPDPVGGFTASLAKFAGVFALTQIPLAISEGLLTVVVMNALLRFNREELGSLNIEGNGQEVQA

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 23350; Mature: 23350

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIMEGFLPVEHAIGWSVASAPVVAYGLYSINKKINKNPEQRMLLGVAAAFTFVLSALKM
CCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
PSVTGSCSHPTGTGLGAILFGPSAVAPIGAVVLLFQALLLAHGGLTTLGANIFSMAIVGP
CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FAAAAVFRLARAARFPFGVGVFLAASLGDLLTYVTTACQLAFAFPDPVGGFTASLAKFAG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VFALTQIPLAISEGLLTVVVMNALLRFNREELGSLNIEGNGQEVQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MHIMEGFLPVEHAIGWSVASAPVVAYGLYSINKKINKNPEQRMLLGVAAAFTFVLSALKM
CCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
PSVTGSCSHPTGTGLGAILFGPSAVAPIGAVVLLFQALLLAHGGLTTLGANIFSMAIVGP
CCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FAAAAVFRLARAARFPFGVGVFLAASLGDLLTYVTTACQLAFAFPDPVGGFTASLAKFAG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VFALTQIPLAISEGLLTVVVMNALLRFNREELGSLNIEGNGQEVQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]