Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118579573

Identifier: 118579573

GI number: 118579573

Start: 1188542

End: 1189552

Strand: Reverse

Name: 118579573

Synonym: Ppro_1141

Alternate gene names: NA

Gene position: 1189552-1188542 (Counterclockwise)

Preceding gene: 118579588

Following gene: 118579572

Centisome position: 29.68

GC content: 61.33

Gene sequence:

>1011_bases
GTGCCCTACGGAAAAACCACACTGCTGCCCTTCCTGCTGCTGTTTCTGCTCCTGGGGACTCTCTGCCCCGCAGGTGCAGG
TGCAGGCGCCGCACCCTACCGGGTTCTGGTTGTCATGAGCTATCATGAAACCCAGCCCCTGGAGGAAGAAACCAGGAAGG
GGATCGAGTCGGTCCTGCAGGGCAAGGCTGAGTTACACTACGTCTACCTGGACACGAAGTACAACTCCCATCAGGGAAAG
GAAAAGGCGGCCACGGCGTATGCCCTGTACCGGGAACTCCGCCCCGACGGTGTCATCGCCGCCGACGATGATGCGCAGGC
GCTGTTCGTCGTCCCCTTTCTGAGGAACAGGGTCACAACGCCGGTCATGTTCTGCGGAGTCAACGCGGAACCGGACCGCT
ACGGCTACCCTGCCCGCAATGTATCCGGCATTCGCGAACGCTCCCACATCAGCGAATCCATAGCGTTTCTGCAGCAGCTG
GTCCCCTCGGTCAGAAGGATCGCCTTCATGGCCTCCGACGATGCCATGGGGAAGATACTCAAGAGCCTGGTCGAGAGGGA
GGCCCAATCGTACTCGGCAACGTCGCTGCCGGTCAGGTTGGTAACTACCCTGGGCGAGGCGAAGAGCGCCGCCCTGGAGC
TGCGCCAGCAAAGTGACGCCCTGCTGCTGTTCTCCATGGCCTCGATCAGGGATGCAGCACACAACCATCCCAACGACAGG
CAGATCTTCAGCAGCCTGTCACGGCAATACGGCAAACCGGTTATCGGCACGACTGATTACATGATCCGCCACGGTCTGCT
CTGCGCCGTGGTCAACTCCGGCCGGGAACAGGGGGCCACCGCCGCCAGAATGCTGCTCAGGGCCATGGACGGAACAGCGG
TCTCCCGGATTCCGCTCACCAGCAACTACGAGGGGAAGCGCATGATCAATGTCACCGTCATGAAGTCCCTGGGCATCAGG
CCACGTCCGATCGTCCTGCGCGGCGTGGAACTGGTCAATACCGCTGAATAG

Upstream 100 bases:

>100_bases
AATGAAAATATACAATGCTCTTCACCTATTACCCCGAGGCAGAGGGCACACGCCCCGCTCTCTCCAGGGGGAACAATGCG
CCATACCCGGAGAACGATCC

Downstream 100 bases:

>100_bases
GCAACTTCGTATTTTATTTTTCCCCGATGAAGCTGATATGTTTTCATGATGCTTTGCGCAACTCTCCCCATGGAGGACCG
GGTTTATGTTCCACAGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Multi-Sensor Hybrid Histidine Kinase; Diguanylate Cyclase; Sensory Box Histidine Kinase; PAS/PAC Sensor Protein; Sensory Box/GGDEF Family Protein; PAS Sensor Protein; Hipothetical Sensory Box/GGDEF Family Protein; Signal Transduction Protein; ABC-Type Transport System Periplasmic Component

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MPYGKTTLLPFLLLFLLLGTLCPAGAGAGAAPYRVLVVMSYHETQPLEEETRKGIESVLQGKAELHYVYLDTKYNSHQGK
EKAATAYALYRELRPDGVIAADDDAQALFVVPFLRNRVTTPVMFCGVNAEPDRYGYPARNVSGIRERSHISESIAFLQQL
VPSVRRIAFMASDDAMGKILKSLVEREAQSYSATSLPVRLVTTLGEAKSAALELRQQSDALLLFSMASIRDAAHNHPNDR
QIFSSLSRQYGKPVIGTTDYMIRHGLLCAVVNSGREQGATAARMLLRAMDGTAVSRIPLTSNYEGKRMINVTVMKSLGIR
PRPIVLRGVELVNTAE

Sequences:

>Translated_336_residues
MPYGKTTLLPFLLLFLLLGTLCPAGAGAGAAPYRVLVVMSYHETQPLEEETRKGIESVLQGKAELHYVYLDTKYNSHQGK
EKAATAYALYRELRPDGVIAADDDAQALFVVPFLRNRVTTPVMFCGVNAEPDRYGYPARNVSGIRERSHISESIAFLQQL
VPSVRRIAFMASDDAMGKILKSLVEREAQSYSATSLPVRLVTTLGEAKSAALELRQQSDALLLFSMASIRDAAHNHPNDR
QIFSSLSRQYGKPVIGTTDYMIRHGLLCAVVNSGREQGATAARMLLRAMDGTAVSRIPLTSNYEGKRMINVTVMKSLGIR
PRPIVLRGVELVNTAE
>Mature_335_residues
PYGKTTLLPFLLLFLLLGTLCPAGAGAGAAPYRVLVVMSYHETQPLEEETRKGIESVLQGKAELHYVYLDTKYNSHQGKE
KAATAYALYRELRPDGVIAADDDAQALFVVPFLRNRVTTPVMFCGVNAEPDRYGYPARNVSGIRERSHISESIAFLQQLV
PSVRRIAFMASDDAMGKILKSLVEREAQSYSATSLPVRLVTTLGEAKSAALELRQQSDALLLFSMASIRDAAHNHPNDRQ
IFSSLSRQYGKPVIGTTDYMIRHGLLCAVVNSGREQGATAARMLLRAMDGTAVSRIPLTSNYEGKRMINVTVMKSLGIRP
RPIVLRGVELVNTAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36944; Mature: 36813

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYGKTTLLPFLLLFLLLGTLCPAGAGAGAAPYRVLVVMSYHETQPLEEETRKGIESVLQ
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHC
GKAELHYVYLDTKYNSHQGKEKAATAYALYRELRPDGVIAADDDAQALFVVPFLRNRVTT
CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEHHHCCCCC
PVMFCGVNAEPDRYGYPARNVSGIRERSHISESIAFLQQLVPSVRRIAFMASDDAMGKIL
CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KSLVEREAQSYSATSLPVRLVTTLGEAKSAALELRQQSDALLLFSMASIRDAAHNHPNDR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCHH
QIFSSLSRQYGKPVIGTTDYMIRHGLLCAVVNSGREQGATAARMLLRAMDGTAVSRIPLT
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCCEEECCCC
SNYEGKRMINVTVMKSLGIRPRPIVLRGVELVNTAE
CCCCCCEEEEEEEHHHCCCCCCCEEEECCHHHCCCC
>Mature Secondary Structure 
PYGKTTLLPFLLLFLLLGTLCPAGAGAGAAPYRVLVVMSYHETQPLEEETRKGIESVLQ
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHC
GKAELHYVYLDTKYNSHQGKEKAATAYALYRELRPDGVIAADDDAQALFVVPFLRNRVTT
CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEHHHCCCCC
PVMFCGVNAEPDRYGYPARNVSGIRERSHISESIAFLQQLVPSVRRIAFMASDDAMGKIL
CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KSLVEREAQSYSATSLPVRLVTTLGEAKSAALELRQQSDALLLFSMASIRDAAHNHPNDR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCHH
QIFSSLSRQYGKPVIGTTDYMIRHGLLCAVVNSGREQGATAARMLLRAMDGTAVSRIPLT
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCCEEECCCC
SNYEGKRMINVTVMKSLGIRPRPIVLRGVELVNTAE
CCCCCCEEEEEEEHHHCCCCCCCEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA