| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579562
Identifier: 118579562
GI number: 118579562
Start: 1172921
End: 1174327
Strand: Reverse
Name: 118579562
Synonym: Ppro_1130
Alternate gene names: NA
Gene position: 1174327-1172921 (Counterclockwise)
Preceding gene: 118579563
Following gene: 118579561
Centisome position: 29.3
GC content: 54.66
Gene sequence:
>1407_bases ATGGGAAGCCAAACAGTTGTCAGGGATGTCGTCGTTGTGCTGCCAGGGATTATGGGGAGCACCCTTTCGAAAAACGGCAA ACTTGTCTGGGCGCCATCCGCAGGGGCTGTTCTCGATGCGATCGCGACCTTTGGCCGCAGCATCAGGGAAATGACACTCC CGAATGGAATCGGTGATCATCATCCGAATGACGGTGTCGAGCCGGTAGGGCTCATGCCGGACCTCCATCTTCTGCCGGGA CTCTGGAGTGCCCACATCGGCTACGGGAAACTTCTGAACTGGCTCCGCGCAAGGTTCCATTTCATCGAGCCAACAGCAGG CAAGCCTGACCTTATTCCCAATCTACTACCCATCGCATATGACTGGAGACTCTCAAATCGTTATAACGGTCGTCGGTTGA AAAGTATTGTCGAACCTGCCCTGGAACGATGGCGGGCACAGGGAGGACCGTTTGCCGACGCCAAGCTGATCTTCATCTGT CATTCCATGGGTGGCCTCGTTGCACGCTGGTACATCGAGAAGGAAGGGGGGGCAGGCATTACACGCAAACTGGTAACGCT TGGCACACCCTATCGGGGCGCACTGAATGCACTTGACCAACTGGTGAATGGCGTCAAGAAAGGTATCGGCCCTTTTGCTC TCAATCTCACTTCCTTTGCCCGCAGTCTTCCTTCCGTTCATCAACTTCTTCCCGAGTATGCCTGCATCGAATCGCCCTCA GGCCTTCTGAAAACAACCGAAACGACCATACCCGAGCTTGAGACGGCAATGATAAACGATGCCATGCTTTTTCATGATGA AGTGGATCAAGCAGTTGCAACTCGGACGGCCGATGCATACGATATTCATCCCATTGTGGGAACCCGACAGACAACCTGGA CAACCGCCCGCGTCTTCGGCAAGTCGTTACAGCCGATGGAGACAATCGGTGATGAAGAAGAGGGGGGGGATGCCACGGTT CCCCGCCTCTCAGCGATTCCCAAGGGGACCCGTCCCGACAGCAACATCATCTGCTTCATCGCTGACCAGCATGGGGCACT CCAGAGTAACCAGGCCGTACTCGACCAGATCGAGGCAATTCTTACCGCAAAGCCGACAGTGTACAGGGCCACGACACGGC TTGAACTTGGTGTAAAAACCGAGCCTGTTGTCCTTGTGGGTGAGAGGATAACGGTCGAGGCGAGAGTTGTTGGGGGCAAG AGGGTAACGCTTCAGGCCAAAGTAATGAATGAGCGGGGCAAAACTGTTTCAACCAACGTATTTCGGCTGTTGGAGGATCT GCACACAGTCGAGGTGGAAACGCTTCCACCCGGTGCATACCGGATCATGGTTGAGGGTGTTGGTTCCATGAAAACATCTG TTGCACCGGTAGCATGCACAGTGCTTGTCTGGGGAGGAAGTCAATGA
Upstream 100 bases:
>100_bases CCCCGTCCTTTGGGCGGGGATTCGGCCGCCGTTTAATGAGTTGATTGTTTCCAAATCAGCTACGTCCCACCGGAACCGCC ACCTCATGAAGGGACAGATA
Downstream 100 bases:
>100_bases TGATGGATCAGGAAAACGCAGAAAATCCCAAGGCGCTGTTTGTCGGCATCGGAGTCGGTACCTACGACCATTTCAACCCA TTACCGAAGGCAATTTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MGSQTVVRDVVVVLPGIMGSTLSKNGKLVWAPSAGAVLDAIATFGRSIREMTLPNGIGDHHPNDGVEPVGLMPDLHLLPG LWSAHIGYGKLLNWLRARFHFIEPTAGKPDLIPNLLPIAYDWRLSNRYNGRRLKSIVEPALERWRAQGGPFADAKLIFIC HSMGGLVARWYIEKEGGAGITRKLVTLGTPYRGALNALDQLVNGVKKGIGPFALNLTSFARSLPSVHQLLPEYACIESPS GLLKTTETTIPELETAMINDAMLFHDEVDQAVATRTADAYDIHPIVGTRQTTWTTARVFGKSLQPMETIGDEEEGGDATV PRLSAIPKGTRPDSNIICFIADQHGALQSNQAVLDQIEAILTAKPTVYRATTRLELGVKTEPVVLVGERITVEARVVGGK RVTLQAKVMNERGKTVSTNVFRLLEDLHTVEVETLPPGAYRIMVEGVGSMKTSVAPVACTVLVWGGSQ
Sequences:
>Translated_468_residues MGSQTVVRDVVVVLPGIMGSTLSKNGKLVWAPSAGAVLDAIATFGRSIREMTLPNGIGDHHPNDGVEPVGLMPDLHLLPG LWSAHIGYGKLLNWLRARFHFIEPTAGKPDLIPNLLPIAYDWRLSNRYNGRRLKSIVEPALERWRAQGGPFADAKLIFIC HSMGGLVARWYIEKEGGAGITRKLVTLGTPYRGALNALDQLVNGVKKGIGPFALNLTSFARSLPSVHQLLPEYACIESPS GLLKTTETTIPELETAMINDAMLFHDEVDQAVATRTADAYDIHPIVGTRQTTWTTARVFGKSLQPMETIGDEEEGGDATV PRLSAIPKGTRPDSNIICFIADQHGALQSNQAVLDQIEAILTAKPTVYRATTRLELGVKTEPVVLVGERITVEARVVGGK RVTLQAKVMNERGKTVSTNVFRLLEDLHTVEVETLPPGAYRIMVEGVGSMKTSVAPVACTVLVWGGSQ >Mature_467_residues GSQTVVRDVVVVLPGIMGSTLSKNGKLVWAPSAGAVLDAIATFGRSIREMTLPNGIGDHHPNDGVEPVGLMPDLHLLPGL WSAHIGYGKLLNWLRARFHFIEPTAGKPDLIPNLLPIAYDWRLSNRYNGRRLKSIVEPALERWRAQGGPFADAKLIFICH SMGGLVARWYIEKEGGAGITRKLVTLGTPYRGALNALDQLVNGVKKGIGPFALNLTSFARSLPSVHQLLPEYACIESPSG LLKTTETTIPELETAMINDAMLFHDEVDQAVATRTADAYDIHPIVGTRQTTWTTARVFGKSLQPMETIGDEEEGGDATVP RLSAIPKGTRPDSNIICFIADQHGALQSNQAVLDQIEAILTAKPTVYRATTRLELGVKTEPVVLVGERITVEARVVGGKR VTLQAKVMNERGKTVSTNVFRLLEDLHTVEVETLPPGAYRIMVEGVGSMKTSVAPVACTVLVWGGSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50694; Mature: 50563
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSQTVVRDVVVVLPGIMGSTLSKNGKLVWAPSAGAVLDAIATFGRSIREMTLPNGIGDH CCCHHHHHHHHHHHCCHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC HPNDGVEPVGLMPDLHLLPGLWSAHIGYGKLLNWLRARFHFIEPTAGKPDLIPNLLPIAY CCCCCCCCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEE DWRLSNRYNGRRLKSIVEPALERWRAQGGPFADAKLIFICHSMGGLVARWYIEKEGGAGI EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCH TRKLVTLGTPYRGALNALDQLVNGVKKGIGPFALNLTSFARSLPSVHQLLPEYACIESPS HHHHEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCHHHHHHHHHHHHCCCC GLLKTTETTIPELETAMINDAMLFHDEVDQAVATRTADAYDIHPIVGTRQTTWTTARVFG CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHC KSLQPMETIGDEEEGGDATVPRLSAIPKGTRPDSNIICFIADQHGALQSNQAVLDQIEAI CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH LTAKPTVYRATTRLELGVKTEPVVLVGERITVEARVVGGKRVTLQAKVMNERGKTVSTNV HHCCCCEEEEEEEEEECCCCCCEEEECCEEEEEEEEECCEEEEEEEEECCCCCCEEHHHH FRLLEDLHTVEVETLPPGAYRIMVEGVGSMKTSVAPVACTVLVWGGSQ HHHHHHHHHEEEEECCCCCEEEEEECCCCCHHCCCCEEEEEEEECCCC >Mature Secondary Structure GSQTVVRDVVVVLPGIMGSTLSKNGKLVWAPSAGAVLDAIATFGRSIREMTLPNGIGDH CCHHHHHHHHHHHCCHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC HPNDGVEPVGLMPDLHLLPGLWSAHIGYGKLLNWLRARFHFIEPTAGKPDLIPNLLPIAY CCCCCCCCCCCCCCHHHHCCHHHHHCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEE DWRLSNRYNGRRLKSIVEPALERWRAQGGPFADAKLIFICHSMGGLVARWYIEKEGGAGI EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCH TRKLVTLGTPYRGALNALDQLVNGVKKGIGPFALNLTSFARSLPSVHQLLPEYACIESPS HHHHEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCHHHHHHHHHHHHCCCC GLLKTTETTIPELETAMINDAMLFHDEVDQAVATRTADAYDIHPIVGTRQTTWTTARVFG CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHC KSLQPMETIGDEEEGGDATVPRLSAIPKGTRPDSNIICFIADQHGALQSNQAVLDQIEAI CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH LTAKPTVYRATTRLELGVKTEPVVLVGERITVEARVVGGKRVTLQAKVMNERGKTVSTNV HHCCCCEEEEEEEEEECCCCCCEEEECCEEEEEEEEECCEEEEEEEEECCCCCCEEHHHH FRLLEDLHTVEVETLPPGAYRIMVEGVGSMKTSVAPVACTVLVWGGSQ HHHHHHHHHEEEEECCCCCEEEEEECCCCCHHCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA