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The map label for this gene is yciA [C]

Identifier: 118579494

GI number: 118579494

Start: 1110939

End: 1111994

Strand: Reverse

Name: yciA [C]

Synonym: Ppro_1061

Alternate gene names: 118579494

Gene position: 1111994-1110939 (Counterclockwise)

Preceding gene: 118579495

Following gene: 118579490

Centisome position: 27.74

GC content: 61.74

Gene sequence:

>1056_bases
ATGACCGATGACAACAAGCTGAATGGCGACACCGCGCTCAGCCCCCATGACACCCGGTACCTGTTCATCCTGCCGTTTTC
CACGGACCCGGTTGTCGCCAGGCGCTTCCTGGCACGGGACAGCAGCATAGTCGGCAACATACGCTTCGGCAAAATCCTGG
AGACACTGGACAAGGTGGCAGAGAATACGGCCATGGCCTATGTGCAGAGATTCTACCCCGAGGCGCGGGTGGTTACCGCG
GCGGTGGACAACATCGTCCTCAGAAACCCCGCCGACACCAAGCGCGACCTGGTCTTCTCGTCCCAGATAAACCACGTGGG
CAGGTCATCCATGGAGGTGGGCATACGGGTCGAGCGCTTGGGAGAGGGGTCGAGCCACCTGGCCAGCTGCTATTTCACCA
TGGTGGCCCGCTCCGCAGACAGCGGCGAGGCCAGAAGCCTCTCCCTCCCTCCGCTCCAGTACCCGCAGGAGCTTGACAAG
AAGCGCTACCAGAAGGCGGAACTGCGTCGTCAGGCGTATCGCGACGGGCTGGCCCAGGCCGAGGAGATGCCCTCCTTGGA
CGAGTACTTGTTTCTCAAGAAACTGCACAAGGAGCAGGAGGAGGAGGGGTTCAGCGGCATACGCGCCGGCCAGCTGGTGC
TGGAGTCCACCTGCCGGGCCTATCCCGAACAGGAGAACGTCCCCAAGACCATCTTCGGTGGCTATCTGATCAGGAAGGCC
TACGAACTGGCAGCCCTGGCGGCCGAGATGGTCGCCCCCAACAGGGCGGTGCCGTGCCAGGTAAACCGCATCAACTTCAA
CCAGCCGGTACTGCTTGGGGACCAGCTGAAATTCACCGCCAGGGTGGTTTACACCGGCAGAACGACCGTTACGGTACAGT
CCGATATCGAGCGTTTCAACCGCAACGCCGGCGACAAGTCGCTCTCCAACTCCTGCCTGTTCACCTTCCGCAACGTGGAC
AGCGATATGCAGCCGCAGCCGGTGCCGTTCATCTATCCGGTCACCTATGCGGAGGATGCGAGACTTCTCAGCGCCTACCG
CCAGAGGCTGGACTAG

Upstream 100 bases:

>100_bases
TACCGCCGAGGGGATCCTGGAGGGTGTGCGCGCCTACATCTCCAGCCTGAAGTAACCCGCCGCGATCCGGCGTGATGAGA
CCTCCACGAGGAGCATGAAT

Downstream 100 bases:

>100_bases
GGTCGCCGGCTCTCCGCCTGCTGACATCGCGAAGATTCTCCACACAAAAAAACCGCCTGATTCCCGGGCGGTTTTTTTGT
GCGTCACGCAGGTCGGTGAG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Acyl-CoA Thioester Hydrolase; Acyl-CoA Hydrolase; Thioesterase Superfamily; Long-Chain Acyl-CoA Thioester Hydrolase Family Protein; Thioesterase Family Protein; Acyl-Coa Hydrolase; Acyl-Coa Thioester Hydrolase Protein; Acy-CoA Thioester Hydrolase-Related Protein; Acyl CoA Thioester Hydrolase

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MTDDNKLNGDTALSPHDTRYLFILPFSTDPVVARRFLARDSSIVGNIRFGKILETLDKVAENTAMAYVQRFYPEARVVTA
AVDNIVLRNPADTKRDLVFSSQINHVGRSSMEVGIRVERLGEGSSHLASCYFTMVARSADSGEARSLSLPPLQYPQELDK
KRYQKAELRRQAYRDGLAQAEEMPSLDEYLFLKKLHKEQEEEGFSGIRAGQLVLESTCRAYPEQENVPKTIFGGYLIRKA
YELAALAAEMVAPNRAVPCQVNRINFNQPVLLGDQLKFTARVVYTGRTTVTVQSDIERFNRNAGDKSLSNSCLFTFRNVD
SDMQPQPVPFIYPVTYAEDARLLSAYRQRLD

Sequences:

>Translated_351_residues
MTDDNKLNGDTALSPHDTRYLFILPFSTDPVVARRFLARDSSIVGNIRFGKILETLDKVAENTAMAYVQRFYPEARVVTA
AVDNIVLRNPADTKRDLVFSSQINHVGRSSMEVGIRVERLGEGSSHLASCYFTMVARSADSGEARSLSLPPLQYPQELDK
KRYQKAELRRQAYRDGLAQAEEMPSLDEYLFLKKLHKEQEEEGFSGIRAGQLVLESTCRAYPEQENVPKTIFGGYLIRKA
YELAALAAEMVAPNRAVPCQVNRINFNQPVLLGDQLKFTARVVYTGRTTVTVQSDIERFNRNAGDKSLSNSCLFTFRNVD
SDMQPQPVPFIYPVTYAEDARLLSAYRQRLD
>Mature_350_residues
TDDNKLNGDTALSPHDTRYLFILPFSTDPVVARRFLARDSSIVGNIRFGKILETLDKVAENTAMAYVQRFYPEARVVTAA
VDNIVLRNPADTKRDLVFSSQINHVGRSSMEVGIRVERLGEGSSHLASCYFTMVARSADSGEARSLSLPPLQYPQELDKK
RYQKAELRRQAYRDGLAQAEEMPSLDEYLFLKKLHKEQEEEGFSGIRAGQLVLESTCRAYPEQENVPKTIFGGYLIRKAY
ELAALAAEMVAPNRAVPCQVNRINFNQPVLLGDQLKFTARVVYTGRTTVTVQSDIERFNRNAGDKSLSNSCLFTFRNVDS
DMQPQPVPFIYPVTYAEDARLLSAYRQRLD

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI81295407, Length=355, Percent_Identity=27.887323943662, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI81295404, Length=355, Percent_Identity=27.887323943662, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI32564577, Length=369, Percent_Identity=25.2032520325203, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17561564, Length=371, Percent_Identity=25.6064690026954, Blast_Score=88, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI32564579, Length=295, Percent_Identity=26.7796610169492, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28571955, Length=345, Percent_Identity=26.0869565217391, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21357159, Length=326, Percent_Identity=26.6871165644172, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI161079406, Length=345, Percent_Identity=25.7971014492754, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.2.- [C]

Molecular weight: Translated: 39624; Mature: 39493

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDNKLNGDTALSPHDTRYLFILPFSTDPVVARRFLARDSSIVGNIRFGKILETLDKVA
CCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEECCHHHHHHHHHHHHH
ENTAMAYVQRFYPEARVVTAAVDNIVLRNPADTKRDLVFSSQINHVGRSSMEVGIRVERL
HHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCHHHCEEEEEC
GEGSSHLASCYFTMVARSADSGEARSLSLPPLQYPQELDKKRYQKAELRRQAYRDGLAQA
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EEMPSLDEYLFLKKLHKEQEEEGFSGIRAGQLVLESTCRAYPEQENVPKTIFGGYLIRKA
HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
YELAALAAEMVAPNRAVPCQVNRINFNQPVLLGDQLKFTARVVYTGRTTVTVQSDIERFN
HHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCCEEEEEEEEECCEEEEEHHHHHHHC
RNAGDKSLSNSCLFTFRNVDSDMQPQPVPFIYPVTYAEDARLLSAYRQRLD
CCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDDNKLNGDTALSPHDTRYLFILPFSTDPVVARRFLARDSSIVGNIRFGKILETLDKVA
CCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEECCHHHHHHHHHHHHH
ENTAMAYVQRFYPEARVVTAAVDNIVLRNPADTKRDLVFSSQINHVGRSSMEVGIRVERL
HHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCHHHCEEEEEC
GEGSSHLASCYFTMVARSADSGEARSLSLPPLQYPQELDKKRYQKAELRRQAYRDGLAQA
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EEMPSLDEYLFLKKLHKEQEEEGFSGIRAGQLVLESTCRAYPEQENVPKTIFGGYLIRKA
HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
YELAALAAEMVAPNRAVPCQVNRINFNQPVLLGDQLKFTARVVYTGRTTVTVQSDIERFN
HHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCCEEEEEEEEECCEEEEEHHHHHHHC
RNAGDKSLSNSCLFTFRNVDSDMQPQPVPFIYPVTYAEDARLLSAYRQRLD
CCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA