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The map label for this gene is rimP

Identifier: 118579396

GI number: 118579396

Start: 1002758

End: 1003243

Strand: Direct

Name: rimP

Synonym: Ppro_0960

Alternate gene names: 118579396

Gene position: 1002758-1003243 (Clockwise)

Preceding gene: 118579394

Following gene: 118579397

Centisome position: 25.02

GC content: 57.82

Gene sequence:

>486_bases
ATGGCACTTCATCGAGACGACATATGCGATCGGATCCGCACGCTGGCTCTGCCGGTTATCGACTCCATGAATCTGGAGTT
GGTGGAAGTGGAGTACAAACGTAGCGGCAGGGAGGCTGTGCTGCGCCTGTTTATCGACAAGGAGGGAGGCGTGACGCTGG
ACGACTGCGCCGACCTGAGCAGGGAGTTGTCGACCCTTCTGGACGTGGAAGACCTTATTCCCTGCGAGTACAGCCTGGAA
GTGTCCTCGCCCGGACTTGACCGGCCACTGAAGAGCGAGGCCGATTACGAACGCTTTAGCGGTCGCCTGATCAAGGTTCG
TACCTACGAGCCGTACCAGGATGACGCCGGAAACAGGCGCAAGACCTTTCTGGGGCGGCTGGAAGGACTTAAGGATGGCA
GTGTTGTCATGTCACTCACCGAAGGGCAGACAGCTTCCATACCGCTGGAGCGCATTGCCAAGGCGCAGCTCGAATTCGAA
TTTTGA

Upstream 100 bases:

>100_bases
GCTTGCTTTTGCGGGATTGTCATGATAATTAAGGTAAAATTTTTGTTCACCCCGGAGTGAGCTCGCAAGGCTCACTTTTT
TTGTTTTTTTAGAGAGCGTT

Downstream 100 bases:

>100_bases
TCTGATTTCATAGACGTCAGCAAGGAGAAGCAACCGTGGAAACGAACATCAGTCTCAAGCACGCCATTGAGCAGATCGTC
AAGGAGAAGGGGATCGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MALHRDDICDRIRTLALPVIDSMNLELVEVEYKRSGREAVLRLFIDKEGGVTLDDCADLSRELSTLLDVEDLIPCEYSLE
VSSPGLDRPLKSEADYERFSGRLIKVRTYEPYQDDAGNRRKTFLGRLEGLKDGSVVMSLTEGQTASIPLERIAKAQLEFE
F

Sequences:

>Translated_161_residues
MALHRDDICDRIRTLALPVIDSMNLELVEVEYKRSGREAVLRLFIDKEGGVTLDDCADLSRELSTLLDVEDLIPCEYSLE
VSSPGLDRPLKSEADYERFSGRLIKVRTYEPYQDDAGNRRKTFLGRLEGLKDGSVVMSLTEGQTASIPLERIAKAQLEFE
F
>Mature_160_residues
ALHRDDICDRIRTLALPVIDSMNLELVEVEYKRSGREAVLRLFIDKEGGVTLDDCADLSRELSTLLDVEDLIPCEYSLEV
SSPGLDRPLKSEADYERFSGRLIKVRTYEPYQDDAGNRRKTFLGRLEGLKDGSVVMSLTEGQTASIPLERIAKAQLEFEF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=142, Percent_Identity=41.5492957746479, Blast_Score=103, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_PELPD (A1AML8)

Other databases:

- EMBL:   CP000482
- RefSeq:   YP_900646.1
- STRING:   A1AML8
- GeneID:   4574245
- GenomeReviews:   CP000482_GR
- KEGG:   ppd:Ppro_0960
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   ELVEVEW
- PhylomeDB:   A1AML8
- ProtClustDB:   PRK14647
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 18229; Mature: 18098

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALHRDDICDRIRTLALPVIDSMNLELVEVEYKRSGREAVLRLFIDKEGGVTLDDCADLS
CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCHHEEEEEEEECCCCEEHHHHHHHH
RELSTLLDVEDLIPCEYSLEVSSPGLDRPLKSEADYERFSGRLIKVRTYEPYQDDAGNRR
HHHHHHHCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCHH
KTFLGRLEGLKDGSVVMSLTEGQTASIPLERIAKAQLEFEF
HHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
ALHRDDICDRIRTLALPVIDSMNLELVEVEYKRSGREAVLRLFIDKEGGVTLDDCADLS
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCHHEEEEEEEECCCCEEHHHHHHHH
RELSTLLDVEDLIPCEYSLEVSSPGLDRPLKSEADYERFSGRLIKVRTYEPYQDDAGNRR
HHHHHHHCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCHH
KTFLGRLEGLKDGSVVMSLTEGQTASIPLERIAKAQLEFEF
HHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA