| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is yceI [C]
Identifier: 118579391
GI number: 118579391
Start: 998809
End: 999369
Strand: Direct
Name: yceI [C]
Synonym: Ppro_0955
Alternate gene names: 118579391
Gene position: 998809-999369 (Clockwise)
Preceding gene: 118579389
Following gene: 118579392
Centisome position: 24.92
GC content: 58.29
Gene sequence:
>561_bases ATGAAACGACTGTTTGTACTCGTGCTGTCGATCCTAACGCTGCTGGCTCCCTGTGTCGTATCCGCCCAGCCCCTTGCCAT TCTCCCGTCCAACACCAGCATCCAGTTCAAGGTACGCAACCTGGGAATCATGAACGTCACCGGTTCCTTCGGAACATTCC GGGGGACGCTGGATCTGGATGAAGCGGACATCACCAGATCGAAGGTGGAGGTGAGCATCGAGACCGCCTCCATCAACACC GGCATCGACAGGCGCGACAAGCATCTGCGCAGCGCTGATTTCTTCGATGTCGCCCGGTACCCGGCCATGAGGTTCAGCTC CACGGCCCTGGAAAAACTGGGGGAGGACAGGCTGAAACTGACCGGAAATCTTACCATACGGGGGATCAGCAGACCGGTGG TGCTGACGGTGGAGGCGCAACCAATTGAGGGACGGGCAGATTTCACCCGTTCGGCATTGGCCACTGCCACCATCAACCGC CAGGACTTCGGGGTCAGTTATGGCGCGGTGATCGGTGACGAGGTACAGATCACCATCACCACCCGCTTGAAGAAACCGTA A
Upstream 100 bases:
>100_bases CGGTTGGCGCTGCCGCAGGGGGCGCTTCCCGCCGGACCGTTGCGTGCGCCGAGGTGGCCGGAATCGTTCGCCCCTGCCTG TTTCACCCGAGGAGGAGATC
Downstream 100 bases:
>100_bases CGCTTTTAGCTGTTTACGGCGCGGGAAACGCCGTGCCGATTTATGCTTTTTTTACTGCGGCCTGATGCGTTGCCCGGATT CCCATGGCCCGTGCATGGGG
Product: YceI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKRLFVLVLSILTLLAPCVVSAQPLAILPSNTSIQFKVRNLGIMNVTGSFGTFRGTLDLDEADITRSKVEVSIETASINT GIDRRDKHLRSADFFDVARYPAMRFSSTALEKLGEDRLKLTGNLTIRGISRPVVLTVEAQPIEGRADFTRSALATATINR QDFGVSYGAVIGDEVQITITTRLKKP
Sequences:
>Translated_186_residues MKRLFVLVLSILTLLAPCVVSAQPLAILPSNTSIQFKVRNLGIMNVTGSFGTFRGTLDLDEADITRSKVEVSIETASINT GIDRRDKHLRSADFFDVARYPAMRFSSTALEKLGEDRLKLTGNLTIRGISRPVVLTVEAQPIEGRADFTRSALATATINR QDFGVSYGAVIGDEVQITITTRLKKP >Mature_186_residues MKRLFVLVLSILTLLAPCVVSAQPLAILPSNTSIQFKVRNLGIMNVTGSFGTFRGTLDLDEADITRSKVEVSIETASINT GIDRRDKHLRSADFFDVARYPAMRFSSTALEKLGEDRLKLTGNLTIRGISRPVVLTVEAQPIEGRADFTRSALATATINR QDFGVSYGAVIGDEVQITITTRLKKP
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=147, Percent_Identity=38.7755102040816, Blast_Score=98, Evalue=3e-22,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 20369; Mature: 20369
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFVLVLSILTLLAPCVVSAQPLAILPSNTSIQFKVRNLGIMNVTGSFGTFRGTLDLD CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECEEEEEECCCCCEEEEEEECC EADITRSKVEVSIETASINTGIDRRDKHLRSADFFDVARYPAMRFSSTALEKLGEDRLKL CCCCCCEEEEEEEEEEEECCCCCCHHHHCCCCCCHHHHHCCCHHCCHHHHHHCCCCCEEE TGNLTIRGISRPVVLTVEAQPIEGRADFTRSALATATINRQDFGVSYGAVIGDEVQITIT EECEEEEECCCCEEEEEECCCCCCCCHHHHHHHEEEEECCHHCCEEECEEECCEEEEEEE TRLKKP EECCCC >Mature Secondary Structure MKRLFVLVLSILTLLAPCVVSAQPLAILPSNTSIQFKVRNLGIMNVTGSFGTFRGTLDLD CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECEEEEEECCCCCEEEEEEECC EADITRSKVEVSIETASINTGIDRRDKHLRSADFFDVARYPAMRFSSTALEKLGEDRLKL CCCCCCEEEEEEEEEEEECCCCCCHHHHCCCCCCHHHHHCCCHHCCHHHHHHCCCCCEEE TGNLTIRGISRPVVLTVEAQPIEGRADFTRSALATATINRQDFGVSYGAVIGDEVQITIT EECEEEEECCCCEEEEEECCCCCCCCHHHHHHHEEEEECCHHCCEEECEEECCEEEEEEE TRLKKP EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA