Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118579388

Identifier: 118579388

GI number: 118579388

Start: 996492

End: 997910

Strand: Direct

Name: 118579388

Synonym: Ppro_0952

Alternate gene names: NA

Gene position: 996492-997910 (Clockwise)

Preceding gene: 118579387

Following gene: 118579389

Centisome position: 24.86

GC content: 64.34

Gene sequence:

>1419_bases
ATGTCAACAAACAGCTGCGGATCAAGGCGCCCACGCGCCTGCCGTCGGTTATCGCACAGCAGCAGCTGTGCTTGTCCCTG
TCCTGAAACCATGCGGGGATCATGCGCCGCTGCAGCGACCAGGCCCCGGCCTGCCAGGGTGAAACGGGATAACAGGGTGC
TTTTTCCGGGCACGCGAGGCCGTCTCAGGCGGCGCAACCCTGGCATCCGCGAAAGAGCGCCTGCCTGCCCCATGATCAAG
AGTCCGCGCACCAAAGGCCCTTCGCAGATGCGATTATTGATACTTTCTGAAAACGTTGTCCCCCGCTCCCTGGCACGGAC
GGCTGTCCGCTTGTTGCTCGTGGCCGCCCTGCTGCTCTCCCTTGTGGGCTGTGGCGAGCAGGGGGAAATGGGGGCGCCTC
CCGCCCCCCTCGGGGAAACGGCGCGGCATACCGTCGCCCAGGGGGCGATTTCATCCGCTGCCAGGCCGTTTTCGACCATA
ACGACAGCCGGCAACGCTTCGGCGCTGAACCTTCCCGAACCTCCCGCCGTGGAGCCGTCGGGCAGACAGGGCAAGGTCAG
GTACCTGGCCGGGGAAAGCCCCGAGTTCGCGCGACGGAAGGGGTGGCCGGTGAAATCCCCTGACCCGCTCCCCGGCTCGA
TCCTGCCGGAAAAGCGCATCCTGGCCTTTTACGGCAATCCGCTCTCCAAACGCATGGGAGTTCTGGGCGAGTACCGCACG
CATGACATGCTGGCCAGGCTGAGGCGAGAGGCGGAGCGCTGGGAGGCGGCCGACCGCTCCCATCCGGTCCAGCCGGCCCT
GCACCTGATCGCCGTGGTGGCCCAGGAGAGCCCGGGCAGGGATGGCACATACCGCATGGTCATGCCGGACGAACTGGTGA
ACCGGGTCCATGGTTGGGCCAGGGAGGCCGATGCCCTGCTGTTTATCGATATCCAGACCGGTCATGACAGCATCCGCACG
CTGCTGCCCCGTTTCGAGCGGTTCCTCAGGAACCCGGACGTGCATCTGGGCATCGACCCGGAGTTCAACTTGGCCGCCAG
CAGGGCCAGGCCAGGCACGCGCATCGGCAGCTATGACGCGGAGGATATCAATTACGTCAGCGGCTATCTGGCGGAACTGG
TGAAGAAGCATAAGCTGCCCCCCAAGGTGCTGGTGGTGCACCGTTTCACCAGGAACGGCCTGACCAATTTTCGCCGCATC
ATCCTGCGGCCCCAGGTGCAGATCGTCATCAATATGGACGGCTGGGGGCCTCCCCTGCTCAAGCGCGATACCTACAGGTC
GTACGTGGTCAGCGAACCGGTCCAGTACACCGGCTTCAAGCTCTTCTACCGCAACGACACCAGGAAGGGGCACAGGCTGC
TGACTCCCAAAGAGCTGCTCAGGCTGAACCCGCAGCCGCTCTACATCCAGTACCAGTGA

Upstream 100 bases:

>100_bases
GTTCCACGCGCCGGGCGGGCAACCGACCACATGGTGCGGTTTCTTGCCGCTGAATTCGGCGTGTCGGTCGATGCTATCCA
GGTGGTGTTTGGCCGCATGA

Downstream 100 bases:

>100_bases
AAGCGCTCTCCTGTCGGCACGGCCGGCGCTGATCCAAAGGAAATCCGTTAGGACACTGATCGCAATGTTCCCTTTTACTC
TCAACGGCACGATCAAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: LigA Protein

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MSTNSCGSRRPRACRRLSHSSSCACPCPETMRGSCAAAATRPRPARVKRDNRVLFPGTRGRLRRRNPGIRERAPACPMIK
SPRTKGPSQMRLLILSENVVPRSLARTAVRLLLVAALLLSLVGCGEQGEMGAPPAPLGETARHTVAQGAISSAARPFSTI
TTAGNASALNLPEPPAVEPSGRQGKVRYLAGESPEFARRKGWPVKSPDPLPGSILPEKRILAFYGNPLSKRMGVLGEYRT
HDMLARLRREAERWEAADRSHPVQPALHLIAVVAQESPGRDGTYRMVMPDELVNRVHGWAREADALLFIDIQTGHDSIRT
LLPRFERFLRNPDVHLGIDPEFNLAASRARPGTRIGSYDAEDINYVSGYLAELVKKHKLPPKVLVVHRFTRNGLTNFRRI
ILRPQVQIVINMDGWGPPLLKRDTYRSYVVSEPVQYTGFKLFYRNDTRKGHRLLTPKELLRLNPQPLYIQYQ

Sequences:

>Translated_472_residues
MSTNSCGSRRPRACRRLSHSSSCACPCPETMRGSCAAAATRPRPARVKRDNRVLFPGTRGRLRRRNPGIRERAPACPMIK
SPRTKGPSQMRLLILSENVVPRSLARTAVRLLLVAALLLSLVGCGEQGEMGAPPAPLGETARHTVAQGAISSAARPFSTI
TTAGNASALNLPEPPAVEPSGRQGKVRYLAGESPEFARRKGWPVKSPDPLPGSILPEKRILAFYGNPLSKRMGVLGEYRT
HDMLARLRREAERWEAADRSHPVQPALHLIAVVAQESPGRDGTYRMVMPDELVNRVHGWAREADALLFIDIQTGHDSIRT
LLPRFERFLRNPDVHLGIDPEFNLAASRARPGTRIGSYDAEDINYVSGYLAELVKKHKLPPKVLVVHRFTRNGLTNFRRI
ILRPQVQIVINMDGWGPPLLKRDTYRSYVVSEPVQYTGFKLFYRNDTRKGHRLLTPKELLRLNPQPLYIQYQ
>Mature_471_residues
STNSCGSRRPRACRRLSHSSSCACPCPETMRGSCAAAATRPRPARVKRDNRVLFPGTRGRLRRRNPGIRERAPACPMIKS
PRTKGPSQMRLLILSENVVPRSLARTAVRLLLVAALLLSLVGCGEQGEMGAPPAPLGETARHTVAQGAISSAARPFSTIT
TAGNASALNLPEPPAVEPSGRQGKVRYLAGESPEFARRKGWPVKSPDPLPGSILPEKRILAFYGNPLSKRMGVLGEYRTH
DMLARLRREAERWEAADRSHPVQPALHLIAVVAQESPGRDGTYRMVMPDELVNRVHGWAREADALLFIDIQTGHDSIRTL
LPRFERFLRNPDVHLGIDPEFNLAASRARPGTRIGSYDAEDINYVSGYLAELVKKHKLPPKVLVVHRFTRNGLTNFRRII
LRPQVQIVINMDGWGPPLLKRDTYRSYVVSEPVQYTGFKLFYRNDTRKGHRLLTPKELLRLNPQPLYIQYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52712; Mature: 52581

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNSCGSRRPRACRRLSHSSSCACPCPETMRGSCAAAATRPRPARVKRDNRVLFPGTRG
CCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCEEECCCCCC
RLRRRNPGIRERAPACPMIKSPRTKGPSQMRLLILSENVVPRSLARTAVRLLLVAALLLS
CHHCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LVGCGEQGEMGAPPAPLGETARHTVAQGAISSAARPFSTITTAGNASALNLPEPPAVEPS
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCCCCC
GRQGKVRYLAGESPEFARRKGWPVKSPDPLPGSILPEKRILAFYGNPLSKRMGVLGEYRT
CCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCHHH
HDMLARLRREAERWEAADRSHPVQPALHLIAVVAQESPGRDGTYRMVMPDELVNRVHGWA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHH
READALLFIDIQTGHDSIRTLLPRFERFLRNPDVHLGIDPEFNLAASRARPGTRIGSYDA
HCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHCCCCCCCCCCCCCC
EDINYVSGYLAELVKKHKLPPKVLVVHRFTRNGLTNFRRIILRPQVQIVINMDGWGPPLL
HHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCC
KRDTYRSYVVSEPVQYTGFKLFYRNDTRKGHRLLTPKELLRLNPQPLYIQYQ
CCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEC
>Mature Secondary Structure 
STNSCGSRRPRACRRLSHSSSCACPCPETMRGSCAAAATRPRPARVKRDNRVLFPGTRG
CCCCCCCCCCHHHHHHCCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCEEECCCCCC
RLRRRNPGIRERAPACPMIKSPRTKGPSQMRLLILSENVVPRSLARTAVRLLLVAALLLS
CHHCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LVGCGEQGEMGAPPAPLGETARHTVAQGAISSAARPFSTITTAGNASALNLPEPPAVEPS
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCCCCC
GRQGKVRYLAGESPEFARRKGWPVKSPDPLPGSILPEKRILAFYGNPLSKRMGVLGEYRT
CCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCHHH
HDMLARLRREAERWEAADRSHPVQPALHLIAVVAQESPGRDGTYRMVMPDELVNRVHGWA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHH
READALLFIDIQTGHDSIRTLLPRFERFLRNPDVHLGIDPEFNLAASRARPGTRIGSYDA
HCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHCCCCCCCCCCCCCC
EDINYVSGYLAELVKKHKLPPKVLVVHRFTRNGLTNFRRIILRPQVQIVINMDGWGPPLL
HHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCC
KRDTYRSYVVSEPVQYTGFKLFYRNDTRKGHRLLTPKELLRLNPQPLYIQYQ
CCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA