Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is yraQ [C]

Identifier: 118579294

GI number: 118579294

Start: 900544

End: 901491

Strand: Reverse

Name: yraQ [C]

Synonym: Ppro_0857

Alternate gene names: 118579294

Gene position: 901491-900544 (Counterclockwise)

Preceding gene: 118579295

Following gene: 118579293

Centisome position: 22.49

GC content: 60.44

Gene sequence:

>948_bases
ATGCTCAAGCAAGCCGCCGATTATCTGACCTTTGACCTGATGGGGCTCACGCCCGGCACCCGCCTGGGCGAGGCGCTTAA
CTTCTTCCTCTACGACACTACCAAGATCTTCCTGCTCCTGACCACGATCATCTTCGTGGTGGCCATCATCCGCTCATCCT
TCCCCCCGGAGCGGACCAAGCGCATCCTCTCCCACAAACGGGAATACATCGGCAACATCCTGGCCGCGCTGCTGGGCATC
GTGACCCCCTTCTGCTCCTGCTCGGCAGTGCCGCTCTTCATCGGCTTCGTGGAGTCGGGGGTACCGCTGGGGGTGACCTT
TTCGTTTCTGGTCTCCTCGCCCATGGTCAACGAGGTGGCCCTGATCATGCTCTGGGGGTTGTTCGGCTGGAAGATCGCCC
TGATCTACATCGGCACCGGCCTGCTGGTGGCCATTATTGCCGGGATCATCATCGGAAAACTGAAGATGGAGAAGCACGTT
CAGGACTACGTCTGGAAGATGCAGGTGGGCAACGCCGACATCAGGGTCATGACCTTCCGGGAAAAGATCGACTATGCCCG
CGACTACACCCTGGATCTCTTGAAGAAGATCTGGCCCTACGTGGTGGTCGGCATCGGCATCGGCGGTTTCATCCACGGCT
ATGTGCCCCAGGATTTCCTGGCCACATGGGCAGGCCGTGACAACCCCTTTGCCGTGCCGCTGGCCGTGGCCCTGGGCGTG
CCGCTCTACTCCAACGCCGCCGGTGTGATCCCCATCGTCCAGGCCCTGACCGCCAAGGGGATGGCCATGGGCACGGTGCT
GGCCTTCATGATGGCGGTCACGGCCCTGTCGCTGCCAGAGGCGATCATCCTGAGCAATGTGCTTAAAAAGCCGCTGCTAG
GGACCTTCTTCGGCATCGTGGCCCTGGCCATCGTCTGTATCGGTTATCTGTTCAATGCGATACTCTGA

Upstream 100 bases:

>100_bases
TTCAGCCTCGCTCGTGAAACCGGCTGCAGCGGCATGCCGGTGTGGCTCTTCCCCCAGTTCGTCACCCAGCAGTTGCTGCG
CATAACCGAGGTCACCCGCC

Downstream 100 bases:

>100_bases
TCAACCCTATCCGAGTAAAAACCACCACAAAGGAGAAGACGAATGAAAATCGAAGTATTGGGAAGCGGTTGCGCAAAATG
CAAGACACTGTATGAGGCGG

Product: permease

Products: NA

Alternate protein names: Permease Family Protein; Permease Superfamily; Permease-Like Protein; Integral Membrane Protein

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MLKQAADYLTFDLMGLTPGTRLGEALNFFLYDTTKIFLLLTTIIFVVAIIRSSFPPERTKRILSHKREYIGNILAALLGI
VTPFCSCSAVPLFIGFVESGVPLGVTFSFLVSSPMVNEVALIMLWGLFGWKIALIYIGTGLLVAIIAGIIIGKLKMEKHV
QDYVWKMQVGNADIRVMTFREKIDYARDYTLDLLKKIWPYVVVGIGIGGFIHGYVPQDFLATWAGRDNPFAVPLAVALGV
PLYSNAAGVIPIVQALTAKGMAMGTVLAFMMAVTALSLPEAIILSNVLKKPLLGTFFGIVALAIVCIGYLFNAIL

Sequences:

>Translated_315_residues
MLKQAADYLTFDLMGLTPGTRLGEALNFFLYDTTKIFLLLTTIIFVVAIIRSSFPPERTKRILSHKREYIGNILAALLGI
VTPFCSCSAVPLFIGFVESGVPLGVTFSFLVSSPMVNEVALIMLWGLFGWKIALIYIGTGLLVAIIAGIIIGKLKMEKHV
QDYVWKMQVGNADIRVMTFREKIDYARDYTLDLLKKIWPYVVVGIGIGGFIHGYVPQDFLATWAGRDNPFAVPLAVALGV
PLYSNAAGVIPIVQALTAKGMAMGTVLAFMMAVTALSLPEAIILSNVLKKPLLGTFFGIVALAIVCIGYLFNAIL
>Mature_315_residues
MLKQAADYLTFDLMGLTPGTRLGEALNFFLYDTTKIFLLLTTIIFVVAIIRSSFPPERTKRILSHKREYIGNILAALLGI
VTPFCSCSAVPLFIGFVESGVPLGVTFSFLVSSPMVNEVALIMLWGLFGWKIALIYIGTGLLVAIIAGIIIGKLKMEKHV
QDYVWKMQVGNADIRVMTFREKIDYARDYTLDLLKKIWPYVVVGIGIGGFIHGYVPQDFLATWAGRDNPFAVPLAVALGV
PLYSNAAGVIPIVQALTAKGMAMGTVLAFMMAVTALSLPEAIILSNVLKKPLLGTFFGIVALAIVCIGYLFNAIL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34331; Mature: 34331

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQAADYLTFDLMGLTPGTRLGEALNFFLYDTTKIFLLLTTIIFVVAIIRSSFPPERTK
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RILSHKREYIGNILAALLGIVTPFCSCSAVPLFIGFVESGVPLGVTFSFLVSSPMVNEVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
LIMLWGLFGWKIALIYIGTGLLVAIIAGIIIGKLKMEKHVQDYVWKMQVGNADIRVMTFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEH
EKIDYARDYTLDLLKKIWPYVVVGIGIGGFIHGYVPQDFLATWAGRDNPFAVPLAVALGV
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCC
PLYSNAAGVIPIVQALTAKGMAMGTVLAFMMAVTALSLPEAIILSNVLKKPLLGTFFGIV
CHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ALAIVCIGYLFNAIL
HHHHHHHHHHHHHHC
>Mature Secondary Structure
MLKQAADYLTFDLMGLTPGTRLGEALNFFLYDTTKIFLLLTTIIFVVAIIRSSFPPERTK
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RILSHKREYIGNILAALLGIVTPFCSCSAVPLFIGFVESGVPLGVTFSFLVSSPMVNEVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
LIMLWGLFGWKIALIYIGTGLLVAIIAGIIIGKLKMEKHVQDYVWKMQVGNADIRVMTFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEH
EKIDYARDYTLDLLKKIWPYVVVGIGIGGFIHGYVPQDFLATWAGRDNPFAVPLAVALGV
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCC
PLYSNAAGVIPIVQALTAKGMAMGTVLAFMMAVTALSLPEAIILSNVLKKPLLGTFFGIV
CHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ALAIVCIGYLFNAIL
HHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA