| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is ybaB [C]
Identifier: 118579239
GI number: 118579239
Start: 847214
End: 847528
Strand: Reverse
Name: ybaB [C]
Synonym: Ppro_0801
Alternate gene names: 118579239
Gene position: 847528-847214 (Counterclockwise)
Preceding gene: 118579240
Following gene: 118579238
Centisome position: 21.15
GC content: 54.29
Gene sequence:
>315_bases ATGGCAAAAGGTATGACAAACATTTTGAAGCAGGCCCAGATGATTCAGGCCAAGATGTCGAAACTGCAGGAGAACGCGGC AATGAAAACGGCCGAGGCAACCTCCGGCGGCGGGGCAGTCACCGTTGCCGTCAACGGCAAGAACGAGATACTGTCGCTGT CGATACAAAAACAGGTGGTTGATCCGGAGGATGTGGAGATGTTGCAGGATCTGATCCGTGCGGCGGTAAATCAGGCGCTG AAAAAGGTTCAGGATGAACTATCGGGAGAGATGTCCCGCATAACCGGGGGAAGGAGCATCCCGGGGGTTTTCTGA
Upstream 100 bases:
>100_bases CGGGCAATTTTGCCCACATGCAGGCACGTCATCCCGATGAGACCGCGCCTGACGCGCAAAGCCGACTACGTGCGGCACAC TACATTTTCAGGAGGAAACA
Downstream 100 bases:
>100_bases CGGATTGTTCCGTTGGAATCGGTGTAAAGGTTTTCCATGACGTCACAGTTCTATTATTCCATCATTGTCTTTATCTTCGG AGCCGTGACCGGTTCATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MAKGMTNILKQAQMIQAKMSKLQENAAMKTAEATSGGGAVTVAVNGKNEILSLSIQKQVVDPEDVEMLQDLIRAAVNQAL KKVQDELSGEMSRITGGRSIPGVF
Sequences:
>Translated_104_residues MAKGMTNILKQAQMIQAKMSKLQENAAMKTAEATSGGGAVTVAVNGKNEILSLSIQKQVVDPEDVEMLQDLIRAAVNQAL KKVQDELSGEMSRITGGRSIPGVF >Mature_103_residues AKGMTNILKQAQMIQAKMSKLQENAAMKTAEATSGGGAVTVAVNGKNEILSLSIQKQVVDPEDVEMLQDLIRAAVNQALK KVQDELSGEMSRITGGRSIPGVF
Specific function: Unknown
COG id: COG0718
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0133 family [H]
Homologues:
Organism=Escherichia coli, GI1786677, Length=101, Percent_Identity=34.6534653465347, Blast_Score=67, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004401 [H]
Pfam domain/function: PF02575 DUF149 [H]
EC number: NA
Molecular weight: Translated: 11059; Mature: 10928
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGMTNILKQAQMIQAKMSKLQENAAMKTAEATSGGGAVTVAVNGKNEILSLSIQKQVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHCC DPEDVEMLQDLIRAAVNQALKKVQDELSGEMSRITGGRSIPGVF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AKGMTNILKQAQMIQAKMSKLQENAAMKTAEATSGGGAVTVAVNGKNEILSLSIQKQVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHCC DPEDVEMLQDLIRAAVNQALKKVQDELSGEMSRITGGRSIPGVF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA