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The map label for this gene is 118579170

Identifier: 118579170

GI number: 118579170

Start: 769171

End: 769509

Strand: Reverse

Name: 118579170

Synonym: Ppro_0731

Alternate gene names: NA

Gene position: 769509-769171 (Counterclockwise)

Preceding gene: 118579171

Following gene: 118579169

Centisome position: 19.2

GC content: 61.65

Gene sequence:

>339_bases
ATGTTTCAGAGACAAACCACAGAAGAGTATTGGCAGCCGCTGGATGGAATTTGGCAGAAGACCCTGGTGCATGGCGCCAG
CACCCTGATGGTGGAGTTCAGGCTGCAAAGGGGGGCGATTCTGCCGCTGCACTCCCACCCCCACGAGCAGACCGGCTACC
TGGTTAGCGGCCGGATCCGGCTGACAATCGCCGGGGAAAGCCGGGAACTGGAGCCGGGCGACAGCTGGTGCATCCCCGGC
GACGCAGCCCACGGCGCAGAAATCATGGAGGATAGCGTGGCAATCGAGGTATTCTCGCCCGTGCGGGAAGAATATCTGCC
AGAGAGGAGAACCCCGTGA

Upstream 100 bases:

>100_bases
GAGTGCTGGGCTCCCTGTTCGGCGGCTCCGGCAGGCGGCGCTGAGCGACGTTGGAGAGCACGGTGCGCTACAACCGCATC
CGAGAGAAGTGGAGACAGGA

Downstream 100 bases:

>100_bases
GCATGCCAGAAGAGTACTTCCGGGCCGGAGCAGGCGCGGTGGTCATCAACGACAGGGGGCTGGTGCTGGTCCTGGAACGG
GCCGACATACCCGGTGCCTG

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Pectin Degradation Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Pectin Degradation Protein KdgF; Cupin Domain Protein; Cupin Superfamily Barrel Domain-Containing Protein; Cupin Domain-Containing Protein; Degradation Protein

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MFQRQTTEEYWQPLDGIWQKTLVHGASTLMVEFRLQRGAILPLHSHPHEQTGYLVSGRIRLTIAGESRELEPGDSWCIPG
DAAHGAEIMEDSVAIEVFSPVREEYLPERRTP

Sequences:

>Translated_112_residues
MFQRQTTEEYWQPLDGIWQKTLVHGASTLMVEFRLQRGAILPLHSHPHEQTGYLVSGRIRLTIAGESRELEPGDSWCIPG
DAAHGAEIMEDSVAIEVFSPVREEYLPERRTP
>Mature_112_residues
MFQRQTTEEYWQPLDGIWQKTLVHGASTLMVEFRLQRGAILPLHSHPHEQTGYLVSGRIRLTIAGESRELEPGDSWCIPG
DAAHGAEIMEDSVAIEVFSPVREEYLPERRTP

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12756; Mature: 12756

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQRQTTEEYWQPLDGIWQKTLVHGASTLMVEFRLQRGAILPLHSHPHEQTGYLVSGRIR
CCCCCCCHHHHCCHHHHHHHHHHHCCHHEEEEEEECCCEEEECCCCCCCCCCEEEECEEE
LTIAGESRELEPGDSWCIPGDAAHGAEIMEDSVAIEVFSPVREEYLPERRTP
EEECCCCCCCCCCCCEECCCCCCCCHHHHHCHHEEEHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFQRQTTEEYWQPLDGIWQKTLVHGASTLMVEFRLQRGAILPLHSHPHEQTGYLVSGRIR
CCCCCCCHHHHCCHHHHHHHHHHHCCHHEEEEEEECCCEEEECCCCCCCCCCEEEECEEE
LTIAGESRELEPGDSWCIPGDAAHGAEIMEDSVAIEVFSPVREEYLPERRTP
EEECCCCCCCCCCCCEECCCCCCCCHHHHHCHHEEEHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA