Click here to switch to the map view.

The map label for this gene is tsr [C]

Identifier: 118579163

GI number: 118579163

Start: 759359

End: 760978

Strand: Direct

Name: tsr [C]

Synonym: Ppro_0724

Alternate gene names: 118579163

Gene position: 759359-760978 (Clockwise)

Preceding gene: 118579161

Following gene: 118579164

Centisome position: 18.95

GC content: 56.85

Gene sequence:

>1620_bases
ATGAGCAAATTTAGCATCGGAACCCGTCTGCTGGCAGGATTTTCGTTTGTTCTGATACTTCTGGCCGTTATCATCGCCAC
AGGGGTCAACAGCCTTAACAAGAGCGAGGATCAGCTGAAGAATGTCAAACGTATCAGCGGCCTGAGCAACAAGGTAGTGG
TTGCGACCATCGCCGACAAAGATATTCAGGAGTTGGTGAAGGGGCTGATAATGGTTGACCTGAGCGCTGAGAGGGGGCGG
GTCGTCGCCAGCATACGCGAACTGGAGCAGAAGTGCGCGGAAGCGGTGGATGTGCTGGACAAAAACACCAAAACACCGGA
TGGCAAGAAGCTTGTGGCCGAGGTGAAGGCAGCCCGTGAGGAAGTTGCCAGAGTGGATGAAAAACTCATCACCCTGGCGA
TCAGTGGTGACAGTGCCGGGTTTAAGGCGATGATGAATGTTGAAGGAGAAAAGGCGATTGCCAGGTCATCATCGGCGCTT
GACGCTCTGCTGTCGTTCTACGACAAACGTGTGGGAGTTCGCGTAGATGATGCGATCGACAATGCCGCCTACGCAACCCG
ACTGATGTTTGGTCTGGGCATCGCAGCCATCCTCCTGGGAATTCTGGCAGCCGTTTTCATCACGCGCAGCATTACGGTGC
CATTGCACACCTGTGTGGAGATGGCCGACAAGATTGCCGATGGTGACATGTCCATTTCCATGAGAGTCGAAGACGGCAAA
TGCGAAACGGTGCATCTCATCAAGGCCATAGCAAATATGGCAGAGAGAATTCGCGATGCCATCGGCCGTGTTTCCCTGGC
TGCCGGCGAGGTCTCCGCCGCTGTTACGGAACTGCATGAAAATTCGCAACGCATGGTACGGGGGACTGATGAGGTTTCCT
CCCAGGCTTCCATGGTTGCCACTGCCGGTGAGGAAATGGCAGCCACATCTCTGGATATCGCCAACAACTGCAACTCCGCA
GCCGAGAGCTCGCGCCATGCCAATCAGCTTGCTACCAGCGGAGCTTCCATTGTCCAGGGGACCGTTGACGGGATGGCCCG
CATCGCCGAGCGGGTCCGTGCCACGGCGCGCAGTGTCGAGAATCTCGGCTCACGCTCGGACGAGATCGGCGCCATTGTTG
GCACCATCGAGGATATCGCGGATCAGACCAATCTGTTGGCACTCAACGCGGCAATCGAGGCGGCCCGCGCCGGAGAACAG
GGGCGGGGATTCGCGGTGGTCGCCGACGAGGTTCGCGCCCTCGCCGAACGTACGACCCGTGCGACCAAGGAGATCGGCGG
TATGATCAAAGCTATCCAGACCGAGACGCACCAAGCGGTTCTTTCTATGGATGAGGGCGTCAACGAGGTGGAGAGAGGTA
CGCAAGAAGCGTCCAAGTCCGGCAGTGCACTGGAGGAGATTCTTGCGCAGATCAACGAGGTTACCAACCAGATCAACCAG
ATTGCCACCGCTGCGGAAGAACAGAGCTCAACCAGTCGCGACATCAGCAACAACATGCATATGATCACCGGAATTGTCAA
TGAAACCGCACAGGGAACCCAGGCAACCGCCAAGGCCGCAGACCAGTTGACGGCTCTTGCCAATGACCTGAAGGTGCTTG
TTGCCCAGTTCAGGCTGTAG

Upstream 100 bases:

>100_bases
CATCCATGACTCTTCTTTTCCCTCGTCAGGCCGGAAAAACTCTCGGGATATGATACGATTCAATCACCATACTGCAAGCT
TATCTCGTCGGAGGTGGATA

Downstream 100 bases:

>100_bases
CTGCACTGGCCGCGATGGGGCAGGGCGTCTGAATACGGCATATGAACAACCACGGCACACATACAGCGGAACATCCCCGA
CTTCTCGTCGGATCGATGAA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MSKFSIGTRLLAGFSFVLILLAVIIATGVNSLNKSEDQLKNVKRISGLSNKVVVATIADKDIQELVKGLIMVDLSAERGR
VVASIRELEQKCAEAVDVLDKNTKTPDGKKLVAEVKAAREEVARVDEKLITLAISGDSAGFKAMMNVEGEKAIARSSSAL
DALLSFYDKRVGVRVDDAIDNAAYATRLMFGLGIAAILLGILAAVFITRSITVPLHTCVEMADKIADGDMSISMRVEDGK
CETVHLIKAIANMAERIRDAIGRVSLAAGEVSAAVTELHENSQRMVRGTDEVSSQASMVATAGEEMAATSLDIANNCNSA
AESSRHANQLATSGASIVQGTVDGMARIAERVRATARSVENLGSRSDEIGAIVGTIEDIADQTNLLALNAAIEAARAGEQ
GRGFAVVADEVRALAERTTRATKEIGGMIKAIQTETHQAVLSMDEGVNEVERGTQEASKSGSALEEILAQINEVTNQINQ
IATAAEEQSSTSRDISNNMHMITGIVNETAQGTQATAKAADQLTALANDLKVLVAQFRL

Sequences:

>Translated_539_residues
MSKFSIGTRLLAGFSFVLILLAVIIATGVNSLNKSEDQLKNVKRISGLSNKVVVATIADKDIQELVKGLIMVDLSAERGR
VVASIRELEQKCAEAVDVLDKNTKTPDGKKLVAEVKAAREEVARVDEKLITLAISGDSAGFKAMMNVEGEKAIARSSSAL
DALLSFYDKRVGVRVDDAIDNAAYATRLMFGLGIAAILLGILAAVFITRSITVPLHTCVEMADKIADGDMSISMRVEDGK
CETVHLIKAIANMAERIRDAIGRVSLAAGEVSAAVTELHENSQRMVRGTDEVSSQASMVATAGEEMAATSLDIANNCNSA
AESSRHANQLATSGASIVQGTVDGMARIAERVRATARSVENLGSRSDEIGAIVGTIEDIADQTNLLALNAAIEAARAGEQ
GRGFAVVADEVRALAERTTRATKEIGGMIKAIQTETHQAVLSMDEGVNEVERGTQEASKSGSALEEILAQINEVTNQINQ
IATAAEEQSSTSRDISNNMHMITGIVNETAQGTQATAKAADQLTALANDLKVLVAQFRL
>Mature_538_residues
SKFSIGTRLLAGFSFVLILLAVIIATGVNSLNKSEDQLKNVKRISGLSNKVVVATIADKDIQELVKGLIMVDLSAERGRV
VASIRELEQKCAEAVDVLDKNTKTPDGKKLVAEVKAAREEVARVDEKLITLAISGDSAGFKAMMNVEGEKAIARSSSALD
ALLSFYDKRVGVRVDDAIDNAAYATRLMFGLGIAAILLGILAAVFITRSITVPLHTCVEMADKIADGDMSISMRVEDGKC
ETVHLIKAIANMAERIRDAIGRVSLAAGEVSAAVTELHENSQRMVRGTDEVSSQASMVATAGEEMAATSLDIANNCNSAA
ESSRHANQLATSGASIVQGTVDGMARIAERVRATARSVENLGSRSDEIGAIVGTIEDIADQTNLLALNAAIEAARAGEQG
RGFAVVADEVRALAERTTRATKEIGGMIKAIQTETHQAVLSMDEGVNEVERGTQEASKSGSALEEILAQINEVTNQINQI
ATAAEEQSSTSRDISNNMHMITGIVNETAQGTQATAKAADQLTALANDLKVLVAQFRL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=312, Percent_Identity=31.0897435897436, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1787690, Length=447, Percent_Identity=28.8590604026846, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI1788194, Length=348, Percent_Identity=31.3218390804598, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788195, Length=290, Percent_Identity=32.4137931034483, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1789453, Length=341, Percent_Identity=30.4985337243402, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 57006; Mature: 56874

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFSIGTRLLAGFSFVLILLAVIIATGVNSLNKSEDQLKNVKRISGLSNKVVVATIADK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCH
DIQELVKGLIMVDLSAERGRVVASIRELEQKCAEAVDVLDKNTKTPDGKKLVAEVKAARE
HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
EVARVDEKLITLAISGDSAGFKAMMNVEGEKAIARSSSALDALLSFYDKRVGVRVDDAID
HHHHHHHHHEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHH
NAAYATRLMFGLGIAAILLGILAAVFITRSITVPLHTCVEMADKIADGDMSISMRVEDGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
CETVHLIKAIANMAERIRDAIGRVSLAAGEVSAAVTELHENSQRMVRGTDEVSSQASMVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHH
TAGEEMAATSLDIANNCNSAAESSRHANQLATSGASIVQGTVDGMARIAERVRATARSVE
HCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NLGSRSDEIGAIVGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTR
HHCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH
ATKEIGGMIKAIQTETHQAVLSMDEGVNEVERGTQEASKSGSALEEILAQINEVTNQINQ
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IATAAEEQSSTSRDISNNMHMITGIVNETAQGTQATAKAADQLTALANDLKVLVAQFRL
HHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKFSIGTRLLAGFSFVLILLAVIIATGVNSLNKSEDQLKNVKRISGLSNKVVVATIADK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCH
DIQELVKGLIMVDLSAERGRVVASIRELEQKCAEAVDVLDKNTKTPDGKKLVAEVKAARE
HHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
EVARVDEKLITLAISGDSAGFKAMMNVEGEKAIARSSSALDALLSFYDKRVGVRVDDAID
HHHHHHHHHEEEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHH
NAAYATRLMFGLGIAAILLGILAAVFITRSITVPLHTCVEMADKIADGDMSISMRVEDGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
CETVHLIKAIANMAERIRDAIGRVSLAAGEVSAAVTELHENSQRMVRGTDEVSSQASMVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHH
TAGEEMAATSLDIANNCNSAAESSRHANQLATSGASIVQGTVDGMARIAERVRATARSVE
HCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NLGSRSDEIGAIVGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTR
HHCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH
ATKEIGGMIKAIQTETHQAVLSMDEGVNEVERGTQEASKSGSALEEILAQINEVTNQINQ
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IATAAEEQSSTSRDISNNMHMITGIVNETAQGTQATAKAADQLTALANDLKVLVAQFRL
HHHHHHHHCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA