Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is yfeW [H]

Identifier: 118579153

GI number: 118579153

Start: 744736

End: 745914

Strand: Reverse

Name: yfeW [H]

Synonym: Ppro_0714

Alternate gene names: 118579153

Gene position: 745914-744736 (Counterclockwise)

Preceding gene: 118579154

Following gene: 118579152

Centisome position: 18.61

GC content: 61.58

Gene sequence:

>1179_bases
GTGCGCGCCGTATGCATTTTTTTCACAACAATCATCCTCATCTCATGGGCCTTAATCATCTCCGCCTCCGACGATCTCCC
ACTTGCCGGGCACGCAACCACCATCGACGACCTCCTTGAGCAGGCCATATCACAGGGCCTGATCGCCGGCGGCGTGGTGG
TAGTCGGCAACCACGCCGGCGTGCTCCACAGCACGGCGCGGGGACGCATCCCGGTTACTGCGAACAGGGCTCAACTGGAT
GACGCAACACTCTTCGACCTGGCCTCGCTGACAAAGGTGCTGGCCACCACGCCGGCGGTCATGAAACTGCTGGAAGAGGG
GCGCATCTCCCTGATGGACCCGTTGACCCGCTGGTTTCCCGAATTCGAAGGGTCAGGGCGAGAGGACATCACCATCCTCA
ACCTGATGACCCACACATCGGGCCTCCACGACATCACCATCCCCAGCGCGGTTCCCATTGCCACCGTCATCAGGGAGGTG
GCGACCCAGAAAACCTGGCGCCAGCCGGGACAGCACTTTCTCTATGCCGACATCAACTTCATCCTGCTGGGGGAACTGGT
GCAACGGGTTTCCGGCTCGCGCCTGGACGTTTTCTGCGTCCAGCACATCTATGCTCCGCTGGGCCTCCATGAAACCATGT
TCCTCCCACCGCCCCAGCTGTCGACTTCCGTTGCACCTACCCTGACGAACGCGCAACAGTTCGTCAGCGGGGTTGTGCAG
GATACCAATGCGCGCAACCTGGGTGGCGTTGCCGGGCATGCGGGACTTTTCGGCTCGGCATACGACATGGCCCGCTTTGC
CCGCCTCATACTCTGCGGTGGCATCCTGGACGGCCATCGGATTTTCTCAGAGCGCACCGTGGCACAGATGACAGCCCCCT
ACTTCTACAGTAACGGCAGGGTCGTGCGCGGCCTGGGCTGGGACATCACCTCTCCCTATTCAACCCCCCGGGGGAGTTAT
TTCTCCGAGATGTCCTTTGGCCACACCGGCTACAGCGGTTCATCGCTCTGGATCGATCCCCAGCGGGACCTGTTCGCGAT
CGTCCTGACAATACGCCTTGACTACCGGAATATACGGCTGTTCAATCGCCTGCGCGGGGATATCTCCACGCTCGCCGTAG
CCGCATTCCACGATGCCACACCCGCGCATGCCAACGGGGTACGGCAGCCCGGCCGATGA

Upstream 100 bases:

>100_bases
TTATCGCACCTGACCCTGCCGTAGAGAGTCTCATCTCCTTCAGAAGCTCCCTCTCGAGGGGGCTTTTTTAACGTCCTTTG
AACAGCCGCGGAGGCCAGCC

Downstream 100 bases:

>100_bases
ACAGCGAAAACTTGACACTCCTGTGGTGGTATGTTAGGTATTTTACTCGTTTATCACATTTACGCAGCCATTAATCAGGG
GAGGGGCCGATGAGCACCAA

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MRAVCIFFTTIILISWALIISASDDLPLAGHATTIDDLLEQAISQGLIAGGVVVVGNHAGVLHSTARGRIPVTANRAQLD
DATLFDLASLTKVLATTPAVMKLLEEGRISLMDPLTRWFPEFEGSGREDITILNLMTHTSGLHDITIPSAVPIATVIREV
ATQKTWRQPGQHFLYADINFILLGELVQRVSGSRLDVFCVQHIYAPLGLHETMFLPPPQLSTSVAPTLTNAQQFVSGVVQ
DTNARNLGGVAGHAGLFGSAYDMARFARLILCGGILDGHRIFSERTVAQMTAPYFYSNGRVVRGLGWDITSPYSTPRGSY
FSEMSFGHTGYSGSSLWIDPQRDLFAIVLTIRLDYRNIRLFNRLRGDISTLAVAAFHDATPAHANGVRQPGR

Sequences:

>Translated_392_residues
MRAVCIFFTTIILISWALIISASDDLPLAGHATTIDDLLEQAISQGLIAGGVVVVGNHAGVLHSTARGRIPVTANRAQLD
DATLFDLASLTKVLATTPAVMKLLEEGRISLMDPLTRWFPEFEGSGREDITILNLMTHTSGLHDITIPSAVPIATVIREV
ATQKTWRQPGQHFLYADINFILLGELVQRVSGSRLDVFCVQHIYAPLGLHETMFLPPPQLSTSVAPTLTNAQQFVSGVVQ
DTNARNLGGVAGHAGLFGSAYDMARFARLILCGGILDGHRIFSERTVAQMTAPYFYSNGRVVRGLGWDITSPYSTPRGSY
FSEMSFGHTGYSGSSLWIDPQRDLFAIVLTIRLDYRNIRLFNRLRGDISTLAVAAFHDATPAHANGVRQPGR
>Mature_392_residues
MRAVCIFFTTIILISWALIISASDDLPLAGHATTIDDLLEQAISQGLIAGGVVVVGNHAGVLHSTARGRIPVTANRAQLD
DATLFDLASLTKVLATTPAVMKLLEEGRISLMDPLTRWFPEFEGSGREDITILNLMTHTSGLHDITIPSAVPIATVIREV
ATQKTWRQPGQHFLYADINFILLGELVQRVSGSRLDVFCVQHIYAPLGLHETMFLPPPQLSTSVAPTLTNAQQFVSGVVQ
DTNARNLGGVAGHAGLFGSAYDMARFARLILCGGILDGHRIFSERTVAQMTAPYFYSNGRVVRGLGWDITSPYSTPRGSY
FSEMSFGHTGYSGSSLWIDPQRDLFAIVLTIRLDYRNIRLFNRLRGDISTLAVAAFHDATPAHANGVRQPGR

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0214 family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=307, Percent_Identity=30.6188925081433, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1786574, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790593, Length=319, Percent_Identity=24.7648902821317, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR022849 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 42697; Mature: 42697

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVCIFFTTIILISWALIISASDDLPLAGHATTIDDLLEQAISQGLIAGGVVVVGNHAG
CCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCC
VLHSTARGRIPVTANRAQLDDATLFDLASLTKVLATTPAVMKLLEEGRISLMDPLTRWFP
EEECCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCC
EFEGSGREDITILNLMTHTSGLHDITIPSAVPIATVIREVATQKTWRQPGQHFLYADINF
CCCCCCCCCEEEEEEEHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHH
ILLGELVQRVSGSRLDVFCVQHIYAPLGLHETMFLPPPQLSTSVAPTLTNAQQFVSGVVQ
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
DTNARNLGGVAGHAGLFGSAYDMARFARLILCGGILDGHRIFSERTVAQMTAPYFYSNGR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEECCCC
VVRGLGWDITSPYSTPRGSYFSEMSFGHTGYSGSSLWIDPQRDLFAIVLTIRLDYRNIRL
EEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCEEEEEEEEECHHHHHH
FNRLRGDISTLAVAAFHDATPAHANGVRQPGR
HHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRAVCIFFTTIILISWALIISASDDLPLAGHATTIDDLLEQAISQGLIAGGVVVVGNHAG
CCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCC
VLHSTARGRIPVTANRAQLDDATLFDLASLTKVLATTPAVMKLLEEGRISLMDPLTRWFP
EEECCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCC
EFEGSGREDITILNLMTHTSGLHDITIPSAVPIATVIREVATQKTWRQPGQHFLYADINF
CCCCCCCCCEEEEEEEHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHH
ILLGELVQRVSGSRLDVFCVQHIYAPLGLHETMFLPPPQLSTSVAPTLTNAQQFVSGVVQ
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
DTNARNLGGVAGHAGLFGSAYDMARFARLILCGGILDGHRIFSERTVAQMTAPYFYSNGR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEECCCC
VVRGLGWDITSPYSTPRGSYFSEMSFGHTGYSGSSLWIDPQRDLFAIVLTIRLDYRNIRL
EEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCEEEEEEEEECHHHHHH
FNRLRGDISTLAVAAFHDATPAHANGVRQPGR
HHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA