| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is yfeW [H]
Identifier: 118579153
GI number: 118579153
Start: 744736
End: 745914
Strand: Reverse
Name: yfeW [H]
Synonym: Ppro_0714
Alternate gene names: 118579153
Gene position: 745914-744736 (Counterclockwise)
Preceding gene: 118579154
Following gene: 118579152
Centisome position: 18.61
GC content: 61.58
Gene sequence:
>1179_bases GTGCGCGCCGTATGCATTTTTTTCACAACAATCATCCTCATCTCATGGGCCTTAATCATCTCCGCCTCCGACGATCTCCC ACTTGCCGGGCACGCAACCACCATCGACGACCTCCTTGAGCAGGCCATATCACAGGGCCTGATCGCCGGCGGCGTGGTGG TAGTCGGCAACCACGCCGGCGTGCTCCACAGCACGGCGCGGGGACGCATCCCGGTTACTGCGAACAGGGCTCAACTGGAT GACGCAACACTCTTCGACCTGGCCTCGCTGACAAAGGTGCTGGCCACCACGCCGGCGGTCATGAAACTGCTGGAAGAGGG GCGCATCTCCCTGATGGACCCGTTGACCCGCTGGTTTCCCGAATTCGAAGGGTCAGGGCGAGAGGACATCACCATCCTCA ACCTGATGACCCACACATCGGGCCTCCACGACATCACCATCCCCAGCGCGGTTCCCATTGCCACCGTCATCAGGGAGGTG GCGACCCAGAAAACCTGGCGCCAGCCGGGACAGCACTTTCTCTATGCCGACATCAACTTCATCCTGCTGGGGGAACTGGT GCAACGGGTTTCCGGCTCGCGCCTGGACGTTTTCTGCGTCCAGCACATCTATGCTCCGCTGGGCCTCCATGAAACCATGT TCCTCCCACCGCCCCAGCTGTCGACTTCCGTTGCACCTACCCTGACGAACGCGCAACAGTTCGTCAGCGGGGTTGTGCAG GATACCAATGCGCGCAACCTGGGTGGCGTTGCCGGGCATGCGGGACTTTTCGGCTCGGCATACGACATGGCCCGCTTTGC CCGCCTCATACTCTGCGGTGGCATCCTGGACGGCCATCGGATTTTCTCAGAGCGCACCGTGGCACAGATGACAGCCCCCT ACTTCTACAGTAACGGCAGGGTCGTGCGCGGCCTGGGCTGGGACATCACCTCTCCCTATTCAACCCCCCGGGGGAGTTAT TTCTCCGAGATGTCCTTTGGCCACACCGGCTACAGCGGTTCATCGCTCTGGATCGATCCCCAGCGGGACCTGTTCGCGAT CGTCCTGACAATACGCCTTGACTACCGGAATATACGGCTGTTCAATCGCCTGCGCGGGGATATCTCCACGCTCGCCGTAG CCGCATTCCACGATGCCACACCCGCGCATGCCAACGGGGTACGGCAGCCCGGCCGATGA
Upstream 100 bases:
>100_bases TTATCGCACCTGACCCTGCCGTAGAGAGTCTCATCTCCTTCAGAAGCTCCCTCTCGAGGGGGCTTTTTTAACGTCCTTTG AACAGCCGCGGAGGCCAGCC
Downstream 100 bases:
>100_bases ACAGCGAAAACTTGACACTCCTGTGGTGGTATGTTAGGTATTTTACTCGTTTATCACATTTACGCAGCCATTAATCAGGG GAGGGGCCGATGAGCACCAA
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MRAVCIFFTTIILISWALIISASDDLPLAGHATTIDDLLEQAISQGLIAGGVVVVGNHAGVLHSTARGRIPVTANRAQLD DATLFDLASLTKVLATTPAVMKLLEEGRISLMDPLTRWFPEFEGSGREDITILNLMTHTSGLHDITIPSAVPIATVIREV ATQKTWRQPGQHFLYADINFILLGELVQRVSGSRLDVFCVQHIYAPLGLHETMFLPPPQLSTSVAPTLTNAQQFVSGVVQ DTNARNLGGVAGHAGLFGSAYDMARFARLILCGGILDGHRIFSERTVAQMTAPYFYSNGRVVRGLGWDITSPYSTPRGSY FSEMSFGHTGYSGSSLWIDPQRDLFAIVLTIRLDYRNIRLFNRLRGDISTLAVAAFHDATPAHANGVRQPGR
Sequences:
>Translated_392_residues MRAVCIFFTTIILISWALIISASDDLPLAGHATTIDDLLEQAISQGLIAGGVVVVGNHAGVLHSTARGRIPVTANRAQLD DATLFDLASLTKVLATTPAVMKLLEEGRISLMDPLTRWFPEFEGSGREDITILNLMTHTSGLHDITIPSAVPIATVIREV ATQKTWRQPGQHFLYADINFILLGELVQRVSGSRLDVFCVQHIYAPLGLHETMFLPPPQLSTSVAPTLTNAQQFVSGVVQ DTNARNLGGVAGHAGLFGSAYDMARFARLILCGGILDGHRIFSERTVAQMTAPYFYSNGRVVRGLGWDITSPYSTPRGSY FSEMSFGHTGYSGSSLWIDPQRDLFAIVLTIRLDYRNIRLFNRLRGDISTLAVAAFHDATPAHANGVRQPGR >Mature_392_residues MRAVCIFFTTIILISWALIISASDDLPLAGHATTIDDLLEQAISQGLIAGGVVVVGNHAGVLHSTARGRIPVTANRAQLD DATLFDLASLTKVLATTPAVMKLLEEGRISLMDPLTRWFPEFEGSGREDITILNLMTHTSGLHDITIPSAVPIATVIREV ATQKTWRQPGQHFLYADINFILLGELVQRVSGSRLDVFCVQHIYAPLGLHETMFLPPPQLSTSVAPTLTNAQQFVSGVVQ DTNARNLGGVAGHAGLFGSAYDMARFARLILCGGILDGHRIFSERTVAQMTAPYFYSNGRVVRGLGWDITSPYSTPRGSY FSEMSFGHTGYSGSSLWIDPQRDLFAIVLTIRLDYRNIRLFNRLRGDISTLAVAAFHDATPAHANGVRQPGR
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0214 family [H]
Homologues:
Organism=Escherichia coli, GI87082101, Length=307, Percent_Identity=30.6188925081433, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1786574, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1790593, Length=319, Percent_Identity=24.7648902821317, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR022849 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 42697; Mature: 42697
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVCIFFTTIILISWALIISASDDLPLAGHATTIDDLLEQAISQGLIAGGVVVVGNHAG CCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCC VLHSTARGRIPVTANRAQLDDATLFDLASLTKVLATTPAVMKLLEEGRISLMDPLTRWFP EEECCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCC EFEGSGREDITILNLMTHTSGLHDITIPSAVPIATVIREVATQKTWRQPGQHFLYADINF CCCCCCCCCEEEEEEEHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHH ILLGELVQRVSGSRLDVFCVQHIYAPLGLHETMFLPPPQLSTSVAPTLTNAQQFVSGVVQ HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DTNARNLGGVAGHAGLFGSAYDMARFARLILCGGILDGHRIFSERTVAQMTAPYFYSNGR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEECCCC VVRGLGWDITSPYSTPRGSYFSEMSFGHTGYSGSSLWIDPQRDLFAIVLTIRLDYRNIRL EEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCEEEEEEEEECHHHHHH FNRLRGDISTLAVAAFHDATPAHANGVRQPGR HHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRAVCIFFTTIILISWALIISASDDLPLAGHATTIDDLLEQAISQGLIAGGVVVVGNHAG CCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCC VLHSTARGRIPVTANRAQLDDATLFDLASLTKVLATTPAVMKLLEEGRISLMDPLTRWFP EEECCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCC EFEGSGREDITILNLMTHTSGLHDITIPSAVPIATVIREVATQKTWRQPGQHFLYADINF CCCCCCCCCEEEEEEEHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHH ILLGELVQRVSGSRLDVFCVQHIYAPLGLHETMFLPPPQLSTSVAPTLTNAQQFVSGVVQ HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DTNARNLGGVAGHAGLFGSAYDMARFARLILCGGILDGHRIFSERTVAQMTAPYFYSNGR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEECCCC VVRGLGWDITSPYSTPRGSYFSEMSFGHTGYSGSSLWIDPQRDLFAIVLTIRLDYRNIRL EEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCEEEEEEEEECHHHHHH FNRLRGDISTLAVAAFHDATPAHANGVRQPGR HHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA