| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579085
Identifier: 118579085
GI number: 118579085
Start: 684493
End: 686328
Strand: Direct
Name: 118579085
Synonym: Ppro_0646
Alternate gene names: NA
Gene position: 684493-686328 (Clockwise)
Preceding gene: 118579082
Following gene: 118579087
Centisome position: 17.08
GC content: 59.2
Gene sequence:
>1836_bases GTGAGTTCAAAGAAGGATAAGCTCATAGCGGAAGCACAGCGGTATGCGCTTCGCGGCCAGCTGGACAAGGCAGTGAAGGC TTATGAACAGGTCGTTGCCCTGGATCCCTCCGCCATAAATCAGCGACAGCGACTGGCTGAGCTCTTGGTTAAAGCCGGGC GTATTGACAACGCCCGCAACGAGTTTGAGGAGATCGGTAAATATTACACAACCAACGGCTACTACCTGAAGGCCATCGCC GTCTACAAGAAACTCCAGGTAATGTTTCCCGGCGATATGGACATTACGCTGAAGCTGGCCGAGCTCAACGAAAAACATGG CCTGGCCGCGAACGCCCTGGCCGAGTACAAGCAGGTCTACGATTACCACGAGAAAAACGGCAACAGTGACGCTGCCCTGA GTGTCCTCGAAAAGATGCATGCCGTTGACCAGCAGAATGTCGGAATCATGCTGAAGCTGGCCGAGGCGTACTGTCAGGCA GGCAACCGCGACGAATCCTACGATATCTTCAGTCGCCTGGCGACGCTGCTTCAGGAACGGGGCGACAGTGCGGGGCTGGG CAGGCTGAACTCCCGCATACAGCAACTATTTCCGGAAAAGAACGGTTTCATGTTGGATGTGCTGGCTGGACAGGTGCGGG GTGACGCCGCGAGCACACTCGGCGCGGTCGGCGCCCTGCAGACCATGCTGAAGAGCACTCCTGACGACAGGCGGATCTGG GAACTTGTCATCGAGGCCTACCAGCGCCTCGACCAGCCAGAGCGGGTCAGGATAGCCTATCAGCACTGTATCAGGTTCTT TTCTGACGAAGTCTCCGTGCAGAAAGGCTTGCTGGAGTGCCTGATTGCCGAAAAGGACCTGCAAGAAGCAATCTCGCTGC TGGACAGGTACGAGCAGAACTTTATCGACAAGGATGCCCTTGGCGACCTGCGGGACATCTACAGGTCGCTTGAACTGGTC GATCCCATCAACATGCGTGTCATCTTGGGATTGAAGCGGACCCTTACTGCGCTGGGGGACGGAGAGGGCGCCGCCGCGCT GAACCACAAGATTGACTCCCTGCAGACGTTCTCCGACAGCCATGCTGCTGTCCGGACGACGGACGCAGCCGCCGGCGGGA TGCAGCCGGGTGTGCCCTCCGCGGAGTCGGATGGTGCGGATCAGGAGCTTGAGCTCTCCCTTGGGGAGCCAGAAACGGTC GGAATGGAGCCGTCTGCGGCGGAGCCTGTCGCGTTCGATTTTTCCGAACCGCCGGAGCTCGAGGTTGAAATCGAGATCGA TGAAGATTCCGGGCCTTTTGCCGCCCTGTCCCCGGATGCTGCCGTTCCCGGCGTTGCCGAGGAGGCTTGGCTTGAAGCGG TGGAGGATGTTTTTGACGCGGCTGCCGGTTCGGAACGGAGCGTTAAGTTTGGCAGCGAGGTGGAAATAACCGATGCTCAG TCGCACTACGATCTGGGTGTTGCGTTCAAAGAGATGGGGCTCTTCGATGAAGCGCTCAACGAGTTCCGCCAGGCTGCCGA TGATCCGTTGCGCCGGGTCGCCTGCCTCGTCCTCCAGGGAACCTGTCTGCGGGAGAAGGGGGCTCTGGAAGCTGCCGAGA CGGTGCTGCGCGATCTGCTGAGGGGCGAGTTGGCCGTAGAGGACAGCTGTTCGGTCAAATACGAGCTGGCGCTGGTTTGC GAGGCCGCCGGCAAGTCAGAAGAAGCCGCCAGCCTGCTGGCCGAGATCGATGTGGCCCAGCCCGGTTTCCGCGATGTCCG TTCCCGTCTGGACGCCTCTGGGAATAAGCTGTCGCTAGATTTTTCCGATGAAGATCTGCGGGGTTTCGATTTGTAG
Upstream 100 bases:
>100_bases TCTTGACATGCCGTGCCGGTTACTATAATTTTCGTAGCTGTTTTAATAAAAAAAGCGCTTATGTGGGCTGTTTTGCAACG GTGGAAAGGAACGGGGATCG
Downstream 100 bases:
>100_bases CATTCCATCCCTGGTCTGTCCCGCTGGTGGCGGCAGGCCTTCCGCGTTCAGCATTTCTTCCTGTTCCGCTGAATCTTTTC GTCTGCCATATGCCCTCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Domain Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MSSKKDKLIAEAQRYALRGQLDKAVKAYEQVVALDPSAINQRQRLAELLVKAGRIDNARNEFEEIGKYYTTNGYYLKAIA VYKKLQVMFPGDMDITLKLAELNEKHGLAANALAEYKQVYDYHEKNGNSDAALSVLEKMHAVDQQNVGIMLKLAEAYCQA GNRDESYDIFSRLATLLQERGDSAGLGRLNSRIQQLFPEKNGFMLDVLAGQVRGDAASTLGAVGALQTMLKSTPDDRRIW ELVIEAYQRLDQPERVRIAYQHCIRFFSDEVSVQKGLLECLIAEKDLQEAISLLDRYEQNFIDKDALGDLRDIYRSLELV DPINMRVILGLKRTLTALGDGEGAAALNHKIDSLQTFSDSHAAVRTTDAAAGGMQPGVPSAESDGADQELELSLGEPETV GMEPSAAEPVAFDFSEPPELEVEIEIDEDSGPFAALSPDAAVPGVAEEAWLEAVEDVFDAAAGSERSVKFGSEVEITDAQ SHYDLGVAFKEMGLFDEALNEFRQAADDPLRRVACLVLQGTCLREKGALEAAETVLRDLLRGELAVEDSCSVKYELALVC EAAGKSEEAASLLAEIDVAQPGFRDVRSRLDASGNKLSLDFSDEDLRGFDL
Sequences:
>Translated_611_residues MSSKKDKLIAEAQRYALRGQLDKAVKAYEQVVALDPSAINQRQRLAELLVKAGRIDNARNEFEEIGKYYTTNGYYLKAIA VYKKLQVMFPGDMDITLKLAELNEKHGLAANALAEYKQVYDYHEKNGNSDAALSVLEKMHAVDQQNVGIMLKLAEAYCQA GNRDESYDIFSRLATLLQERGDSAGLGRLNSRIQQLFPEKNGFMLDVLAGQVRGDAASTLGAVGALQTMLKSTPDDRRIW ELVIEAYQRLDQPERVRIAYQHCIRFFSDEVSVQKGLLECLIAEKDLQEAISLLDRYEQNFIDKDALGDLRDIYRSLELV DPINMRVILGLKRTLTALGDGEGAAALNHKIDSLQTFSDSHAAVRTTDAAAGGMQPGVPSAESDGADQELELSLGEPETV GMEPSAAEPVAFDFSEPPELEVEIEIDEDSGPFAALSPDAAVPGVAEEAWLEAVEDVFDAAAGSERSVKFGSEVEITDAQ SHYDLGVAFKEMGLFDEALNEFRQAADDPLRRVACLVLQGTCLREKGALEAAETVLRDLLRGELAVEDSCSVKYELALVC EAAGKSEEAASLLAEIDVAQPGFRDVRSRLDASGNKLSLDFSDEDLRGFDL >Mature_610_residues SSKKDKLIAEAQRYALRGQLDKAVKAYEQVVALDPSAINQRQRLAELLVKAGRIDNARNEFEEIGKYYTTNGYYLKAIAV YKKLQVMFPGDMDITLKLAELNEKHGLAANALAEYKQVYDYHEKNGNSDAALSVLEKMHAVDQQNVGIMLKLAEAYCQAG NRDESYDIFSRLATLLQERGDSAGLGRLNSRIQQLFPEKNGFMLDVLAGQVRGDAASTLGAVGALQTMLKSTPDDRRIWE LVIEAYQRLDQPERVRIAYQHCIRFFSDEVSVQKGLLECLIAEKDLQEAISLLDRYEQNFIDKDALGDLRDIYRSLELVD PINMRVILGLKRTLTALGDGEGAAALNHKIDSLQTFSDSHAAVRTTDAAAGGMQPGVPSAESDGADQELELSLGEPETVG MEPSAAEPVAFDFSEPPELEVEIEIDEDSGPFAALSPDAAVPGVAEEAWLEAVEDVFDAAAGSERSVKFGSEVEITDAQS HYDLGVAFKEMGLFDEALNEFRQAADDPLRRVACLVLQGTCLREKGALEAAETVLRDLLRGELAVEDSCSVKYELALVCE AAGKSEEAASLLAEIDVAQPGFRDVRSRLDASGNKLSLDFSDEDLRGFDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67008; Mature: 66877
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKKDKLIAEAQRYALRGQLDKAVKAYEQVVALDPSAINQRQRLAELLVKAGRIDNARN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHH EFEEIGKYYTTNGYYLKAIAVYKKLQVMFPGDMDITLKLAELNEKHGLAANALAEYKQVY HHHHHHCEEECCCEEEHHHHHHHHHHEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH DYHEKNGNSDAALSVLEKMHAVDQQNVGIMLKLAEAYCQAGNRDESYDIFSRLATLLQER HHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC GDSAGLGRLNSRIQQLFPEKNGFMLDVLAGQVRGDAASTLGAVGALQTMLKSTPDDRRIW CCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHH ELVIEAYQRLDQPERVRIAYQHCIRFFSDEVSVQKGLLECLIAEKDLQEAISLLDRYEQN HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIDKDALGDLRDIYRSLELVDPINMRVILGLKRTLTALGDGEGAAALNHKIDSLQTFSDS CCCHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC HAAVRTTDAAAGGMQPGVPSAESDGADQELELSLGEPETVGMEPSAAEPVAFDFSEPPEL CCEEEECCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCE EVEIEIDEDSGPFAALSPDAAVPGVAEEAWLEAVEDVFDAAAGSERSVKFGSEVEITDAQ EEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC SHYDLGVAFKEMGLFDEALNEFRQAADDPLRRVACLVLQGTCLREKGALEAAETVLRDLL CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH RGELAVEDSCSVKYELALVCEAAGKSEEAASLLAEIDVAQPGFRDVRSRLDASGNKLSLD HCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEE FSDEDLRGFDL CCCCCCCCCCC >Mature Secondary Structure SSKKDKLIAEAQRYALRGQLDKAVKAYEQVVALDPSAINQRQRLAELLVKAGRIDNARN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHH EFEEIGKYYTTNGYYLKAIAVYKKLQVMFPGDMDITLKLAELNEKHGLAANALAEYKQVY HHHHHHCEEECCCEEEHHHHHHHHHHEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH DYHEKNGNSDAALSVLEKMHAVDQQNVGIMLKLAEAYCQAGNRDESYDIFSRLATLLQER HHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC GDSAGLGRLNSRIQQLFPEKNGFMLDVLAGQVRGDAASTLGAVGALQTMLKSTPDDRRIW CCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHH ELVIEAYQRLDQPERVRIAYQHCIRFFSDEVSVQKGLLECLIAEKDLQEAISLLDRYEQN HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIDKDALGDLRDIYRSLELVDPINMRVILGLKRTLTALGDGEGAAALNHKIDSLQTFSDS CCCHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC HAAVRTTDAAAGGMQPGVPSAESDGADQELELSLGEPETVGMEPSAAEPVAFDFSEPPEL CCEEEECCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCE EVEIEIDEDSGPFAALSPDAAVPGVAEEAWLEAVEDVFDAAAGSERSVKFGSEVEITDAQ EEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC SHYDLGVAFKEMGLFDEALNEFRQAADDPLRRVACLVLQGTCLREKGALEAAETVLRDLL CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH RGELAVEDSCSVKYELALVCEAAGKSEEAASLLAEIDVAQPGFRDVRSRLDASGNKLSLD HCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEE FSDEDLRGFDL CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA