Click here to switch to the map view.

The map label for this gene is atpF1

Identifier: 118579041

GI number: 118579041

Start: 637902

End: 638510

Strand: Direct

Name: atpF1

Synonym: Ppro_0602

Alternate gene names: 118579041

Gene position: 637902-638510 (Clockwise)

Preceding gene: 118579040

Following gene: 118579042

Centisome position: 15.92

GC content: 58.13

Gene sequence:

>609_bases
ATGGGTACACCATCTGATCGCACAACAACCCTGTCCTTATGCCTTGCGGTCTGTGTCGTTGTCATTGCCGTCGGTACGGG
GTGGGCATCGGAAGCTGGCGAAGGAGCCCACCAGGTCGATTCTGCGGCCCAAATGAAGGACTTCGGCTGGCGTGTGCTCA
ACTTCGCGGTTCTGGCTGCTCTACTGGGCTGGGCGATTGCAAAGGCACAGGTCAAGAAAGCTCTCAATGAGCGTCAGGTA
AAGATAGAGAGGAGTCTTCGCGAGGCAGAGCAGAGCCGGGACGCTGCGGAGCAAAAACTTCGCGAATACAGCGGCAAGCT
GGAACACGCTTCCCGTGAAATCGAAGAGATGCGGGGCGCGATGCTGCGCGAAAGCGAGCAGGAGAAACAGCGCATCATTG
CCGAAGCCCGCGCTGCCGCCGAAAAGATCGCTGGCCAGGCAACTCTTTCCGCCGAACATGAGGTGCTGAAGGCTCGTTCG
GCTCTGCAAGCCGAGGCTGGCCGCCTGGCGGTTCAGCTTGCAGCTACGAAACTGGCTGGCGCCATTGGCAAGGAAGACCA
CGACCTGTACGTGGATGATTATCTCAAGAAGGTGGAACAGTTCAAATGA

Upstream 100 bases:

>100_bases
TGGCCCGTGAATCGGCGCAGGCCCGGATGCTGTTGGAGCAGCATGCCCTTGCCCTGTCCGATGATATCTGCGAGAAAATC
CTGGGGAGGAGTCTGTAGCC

Downstream 100 bases:

>100_bases
TCAATTCCACGATAGCAAAACGATATGCGTTGTCGCTTGTGCAACTTGGGGCGGAATGCGGGCTGGTTGACCGCTTCCGC
GGGGAGCTTGCAGACGTTGA

Product: H+-transporting two-sector ATPase subunit B/B'

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MGTPSDRTTTLSLCLAVCVVVIAVGTGWASEAGEGAHQVDSAAQMKDFGWRVLNFAVLAALLGWAIAKAQVKKALNERQV
KIERSLREAEQSRDAAEQKLREYSGKLEHASREIEEMRGAMLRESEQEKQRIIAEARAAAEKIAGQATLSAEHEVLKARS
ALQAEAGRLAVQLAATKLAGAIGKEDHDLYVDDYLKKVEQFK

Sequences:

>Translated_202_residues
MGTPSDRTTTLSLCLAVCVVVIAVGTGWASEAGEGAHQVDSAAQMKDFGWRVLNFAVLAALLGWAIAKAQVKKALNERQV
KIERSLREAEQSRDAAEQKLREYSGKLEHASREIEEMRGAMLRESEQEKQRIIAEARAAAEKIAGQATLSAEHEVLKARS
ALQAEAGRLAVQLAATKLAGAIGKEDHDLYVDDYLKKVEQFK
>Mature_201_residues
GTPSDRTTTLSLCLAVCVVVIAVGTGWASEAGEGAHQVDSAAQMKDFGWRVLNFAVLAALLGWAIAKAQVKKALNERQVK
IERSLREAEQSRDAAEQKLREYSGKLEHASREIEEMRGAMLRESEQEKQRIIAEARAAAEKIAGQATLSAEHEVLKARSA
LQAEAGRLAVQLAATKLAGAIGKEDHDLYVDDYLKKVEQFK

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_PELPD (A1ALL3)

Other databases:

- EMBL:   CP000482
- EMBL:   CP000482
- RefSeq:   YP_900291.1
- RefSeq:   YP_901176.1
- STRING:   A1ALL3
- GeneID:   4572178
- GeneID:   4572383
- GenomeReviews:   CP000482_GR
- GenomeReviews:   CP000482_GR
- KEGG:   ppd:Ppro_0602
- KEGG:   ppd:Ppro_1503
- eggNOG:   NOG87654
- HOGENOM:   HBG617328
- OMA:   WALKKAN
- ProtClustDB:   CLSK827641
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 22043; Mature: 21912

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x22718e74)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTPSDRTTTLSLCLAVCVVVIAVGTGWASEAGEGAHQVDSAAQMKDFGWRVLNFAVLAA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLGWAIAKAQVKKALNERQVKIERSLREAEQSRDAAEQKLREYSGKLEHASREIEEMRGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLRESEQEKQRIIAEARAAAEKIAGQATLSAEHEVLKARSALQAEAGRLAVQLAATKLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGKEDHDLYVDDYLKKVEQFK
HHCCCCCCHHHHHHHHHHHHCH
>Mature Secondary Structure 
GTPSDRTTTLSLCLAVCVVVIAVGTGWASEAGEGAHQVDSAAQMKDFGWRVLNFAVLAA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLGWAIAKAQVKKALNERQVKIERSLREAEQSRDAAEQKLREYSGKLEHASREIEEMRGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLRESEQEKQRIIAEARAAAEKIAGQATLSAEHEVLKARSALQAEAGRLAVQLAATKLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGKEDHDLYVDDYLKKVEQFK
HHCCCCCCHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA