| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is bhbA [H]
Identifier: 118578962
GI number: 118578962
Start: 554932
End: 556587
Strand: Reverse
Name: bhbA [H]
Synonym: Ppro_0523
Alternate gene names: 118578962
Gene position: 556587-554932 (Counterclockwise)
Preceding gene: 118578963
Following gene: 118578961
Centisome position: 13.89
GC content: 59.72
Gene sequence:
>1656_bases ATGAGCATTGCGGAAAAGAAGAAGCAGTGGACCGACACCAAAGTAGCCAAATTCCTTACCCGTTCACCGGAGCGCTACGA AAAGTTCCTTACCACATCCAACCTCGAGATCGAGCGCGTATTCACTCCGGATTTCGATTATCCCGGTTACGATGAGAAGC TCGGTTTCCCGGGCAGCTACCCCTATACACGCGGCGTTCAGCCCACCATGTATCGCGGCCGCTTCTGGACCATGCGTCAG TATGCCGGTTTCGGCAACGCCAAAGAATCCAACGAGCGCTACAAATACCTGCTCGGCGCAGGCCAGACCGGCCTCTCCAT CGCCTTCGACCTGCCGACCCAGATGGGTTACGACTCCGACGCAGCCATGAGCCAGGGCGAAGTCGGCAAGGTCGGCGTTG CCATCGACTCGCTGGCCGACGTGGAAGTCCTCTTCGACGGCATCCCGCTGGACAAAGTCTCCACCTCCATGACCGTCAAC TCCACCGCCGCCATCCTGCTCTGCATGTACATCGCCGTTGCCGAGAAGCAGGGCGTGTCCGCCGACAAGATCTCCGGCAC CATCCAGAATGACATCCTCAAGGAGTACATGGCTCGCGGTACCTACATCTATCCGCCGAAAGAGTCCATGCGCCTGATCA CCGACATCTTCGCCTACTGCAAAGACAACGTGCCCAAGTGGAACACCATCTCCATCTCCGGTTACCACATCCGCGAAGCC GGTTCCAGCGCAGTGCAGGAAGTCGCCTTCACCCTGGCCGACGGTATCGCCTACGTTGACGCCGCCATCAAGGCCGGTCT CGACGTGGACGACTTCGCTCCGCGTCTGGCCTTCTTCTTCAACGCCCACAACAACCTGCTGGAAGAGGTTGCCAAGTTCC GCGCCGCACGTCGCATCTGGGCCAAGATCATGAAGGAGCGCTTCGGCGCAAAACTGGAAAAATCCCAGATGCTGCGCTTC CACACCCAGACCGCCGGTTGTACCCTGACTGCCCAGCAGCCGGACAACAACATCATGCGCGTCACCATTCAGACCCTGGC AGCCGTCCTGGGCGGCACCCAGTCCCTGCACACCAACTCCCGCGACGAAGCCCTGGCCCTGCCGACGGAAGACTCCGTCC GCATCGCCCTGCGCACCCAGCAGGTCGTTGCCTACGAATCCGGCGTGGCCGACTCCATCGACCCGCTGGCAGGCTCCTTC TTCGTTGAATCCCTCACCGACCAGATCGAAAAGGCAGCCTGGGAGTACATCGAGAAGATCGACAAACTGGGCGGCGCCGT CGAAGCCATCTCCAACGGCTTCCAGCAGAAGGAAATCCAGGATTCCGCCTACGCCTATCAGAAGGCCATTGAGAAGAACG AACTGATCATCGTCGGCGTCAACAAGTTCACCATCAGTGAGCCGCCTCCGACCGGCCTGCTCAAGGTTACGGGCGAAGTT GAAACCAACCAGAAGAAAGCACTGGCCGAAGTAAAGGCCAAGCGCGACGGCGCAGCCGTCAAGGCAGCTCTGGCGAAACT GGAAGTCGCCGCCAAGGGCACCGACAACCTGATCCCGCTGATCCTGGAAGCGGTGAAAGTGTACGCAACCCTGGGCGAAA TCGCCGACGTATTCAGGGGCGTTTTCGGCAAGCACCAGGAAACCGTCGTCCTGTAA
Upstream 100 bases:
>100_bases GCTAAAATCTTTAATTGACATTCGCGCAGCTTCTCCTTAAAATCCCCAAAATTGTCTTTTTAAGCTTCGTTTATTTTAAT CCCCCCCCAAGGAGCACGAC
Downstream 100 bases:
>100_bases TTCATAACCAGCAGTCAAACTTCACAGGGCCAGGCCGATCAAGCCTGGCCCTGTGCTGATTCCCAAGAAAGGTGACATGA AATGCTCAAGAAGATCAACC
Product: methylmalonyl-CoA mutase, large subunit
Products: NA
Alternate protein names: MCM [H]
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MSIAEKKKQWTDTKVAKFLTRSPERYEKFLTTSNLEIERVFTPDFDYPGYDEKLGFPGSYPYTRGVQPTMYRGRFWTMRQ YAGFGNAKESNERYKYLLGAGQTGLSIAFDLPTQMGYDSDAAMSQGEVGKVGVAIDSLADVEVLFDGIPLDKVSTSMTVN STAAILLCMYIAVAEKQGVSADKISGTIQNDILKEYMARGTYIYPPKESMRLITDIFAYCKDNVPKWNTISISGYHIREA GSSAVQEVAFTLADGIAYVDAAIKAGLDVDDFAPRLAFFFNAHNNLLEEVAKFRAARRIWAKIMKERFGAKLEKSQMLRF HTQTAGCTLTAQQPDNNIMRVTIQTLAAVLGGTQSLHTNSRDEALALPTEDSVRIALRTQQVVAYESGVADSIDPLAGSF FVESLTDQIEKAAWEYIEKIDKLGGAVEAISNGFQQKEIQDSAYAYQKAIEKNELIIVGVNKFTISEPPPTGLLKVTGEV ETNQKKALAEVKAKRDGAAVKAALAKLEVAAKGTDNLIPLILEAVKVYATLGEIADVFRGVFGKHQETVVL
Sequences:
>Translated_551_residues MSIAEKKKQWTDTKVAKFLTRSPERYEKFLTTSNLEIERVFTPDFDYPGYDEKLGFPGSYPYTRGVQPTMYRGRFWTMRQ YAGFGNAKESNERYKYLLGAGQTGLSIAFDLPTQMGYDSDAAMSQGEVGKVGVAIDSLADVEVLFDGIPLDKVSTSMTVN STAAILLCMYIAVAEKQGVSADKISGTIQNDILKEYMARGTYIYPPKESMRLITDIFAYCKDNVPKWNTISISGYHIREA GSSAVQEVAFTLADGIAYVDAAIKAGLDVDDFAPRLAFFFNAHNNLLEEVAKFRAARRIWAKIMKERFGAKLEKSQMLRF HTQTAGCTLTAQQPDNNIMRVTIQTLAAVLGGTQSLHTNSRDEALALPTEDSVRIALRTQQVVAYESGVADSIDPLAGSF FVESLTDQIEKAAWEYIEKIDKLGGAVEAISNGFQQKEIQDSAYAYQKAIEKNELIIVGVNKFTISEPPPTGLLKVTGEV ETNQKKALAEVKAKRDGAAVKAALAKLEVAAKGTDNLIPLILEAVKVYATLGEIADVFRGVFGKHQETVVL >Mature_550_residues SIAEKKKQWTDTKVAKFLTRSPERYEKFLTTSNLEIERVFTPDFDYPGYDEKLGFPGSYPYTRGVQPTMYRGRFWTMRQY AGFGNAKESNERYKYLLGAGQTGLSIAFDLPTQMGYDSDAAMSQGEVGKVGVAIDSLADVEVLFDGIPLDKVSTSMTVNS TAAILLCMYIAVAEKQGVSADKISGTIQNDILKEYMARGTYIYPPKESMRLITDIFAYCKDNVPKWNTISISGYHIREAG SSAVQEVAFTLADGIAYVDAAIKAGLDVDDFAPRLAFFFNAHNNLLEEVAKFRAARRIWAKIMKERFGAKLEKSQMLRFH TQTAGCTLTAQQPDNNIMRVTIQTLAAVLGGTQSLHTNSRDEALALPTEDSVRIALRTQQVVAYESGVADSIDPLAGSFF VESLTDQIEKAAWEYIEKIDKLGGAVEAISNGFQQKEIQDSAYAYQKAIEKNELIIVGVNKFTISEPPPTGLLKVTGEVE TNQKKALAEVKAKRDGAAVKAALAKLEVAAKGTDNLIPLILEAVKVYATLGEIADVFRGVFGKHQETVVL
Specific function: Catalyzes the interconversion of succinyl-CoA and methylmalonyl-CoA during the polyhydroxyalkanoate degradation pathway [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=493, Percent_Identity=47.8701825557809, Blast_Score=478, Evalue=1e-135, Organism=Escherichia coli, GI1789284, Length=491, Percent_Identity=52.9531568228106, Blast_Score=499, Evalue=1e-142, Organism=Caenorhabditis elegans, GI25144500, Length=491, Percent_Identity=50.5091649694501, Blast_Score=504, Evalue=1e-143,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006159 - InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR006098 [H]
Pfam domain/function: PF02310 B12-binding; PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 60671; Mature: 60540
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAEKKKQWTDTKVAKFLTRSPERYEKFLTTSNLEIERVFTPDFDYPGYDEKLGFPGSY CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC PYTRGVQPTMYRGRFWTMRQYAGFGNAKESNERYKYLLGAGQTGLSIAFDLPTQMGYDSD CCCCCCCCCEECCCEEEHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEECCHHCCCCCC AAMSQGEVGKVGVAIDSLADVEVLFDGIPLDKVSTSMTVNSTAAILLCMYIAVAEKQGVS HHCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHCCCCEEECHHHHHHHHHHHHHHHHCCCC ADKISGTIQNDILKEYMARGTYIYPPKESMRLITDIFAYCKDNVPKWNTISISGYHIREA HHHHCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEHHH GSSAVQEVAFTLADGIAYVDAAIKAGLDVDDFAPRLAFFFNAHNNLLEEVAKFRAARRIW HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKIMKERFGAKLEKSQMLRFHTQTAGCTLTAQQPDNNIMRVTIQTLAAVLGGTQSLHTNS HHHHHHHHCCCCCHHHHHHHEECCCCEEEEECCCCCCEEEEHHHHHHHHHCCCHHCCCCC RDEALALPTEDSVRIALRTQQVVAYESGVADSIDPLAGSFFVESLTDQIEKAAWEYIEKI CCCEEECCCCCCEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DKLGGAVEAISNGFQQKEIQDSAYAYQKAIEKNELIIVGVNKFTISEPPPTGLLKVTGEV HHHCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCEEEEECCC ETNQKKALAEVKAKRDGAAVKAALAKLEVAAKGTDNLIPLILEAVKVYATLGEIADVFRG CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VFGKHQETVVL HHCCCCCEEEC >Mature Secondary Structure SIAEKKKQWTDTKVAKFLTRSPERYEKFLTTSNLEIERVFTPDFDYPGYDEKLGFPGSY CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC PYTRGVQPTMYRGRFWTMRQYAGFGNAKESNERYKYLLGAGQTGLSIAFDLPTQMGYDSD CCCCCCCCCEECCCEEEHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEECCHHCCCCCC AAMSQGEVGKVGVAIDSLADVEVLFDGIPLDKVSTSMTVNSTAAILLCMYIAVAEKQGVS HHCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHCCCCEEECHHHHHHHHHHHHHHHHCCCC ADKISGTIQNDILKEYMARGTYIYPPKESMRLITDIFAYCKDNVPKWNTISISGYHIREA HHHHCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEHHH GSSAVQEVAFTLADGIAYVDAAIKAGLDVDDFAPRLAFFFNAHNNLLEEVAKFRAARRIW HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKIMKERFGAKLEKSQMLRFHTQTAGCTLTAQQPDNNIMRVTIQTLAAVLGGTQSLHTNS HHHHHHHHCCCCCHHHHHHHEECCCCEEEEECCCCCCEEEEHHHHHHHHHCCCHHCCCCC RDEALALPTEDSVRIALRTQQVVAYESGVADSIDPLAGSFFVESLTDQIEKAAWEYIEKI CCCEEECCCCCCEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DKLGGAVEAISNGFQQKEIQDSAYAYQKAIEKNELIIVGVNKFTISEPPPTGLLKVTGEV HHHCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCEEEEECCC ETNQKKALAEVKAKRDGAAVKAALAKLEVAAKGTDNLIPLILEAVKVYATLGEIADVFRG CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VFGKHQETVVL HHCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9889346; 11481431 [H]