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The map label for this gene is ybjT [C]

Identifier: 118578929

GI number: 118578929

Start: 511603

End: 512499

Strand: Reverse

Name: ybjT [C]

Synonym: Ppro_0490

Alternate gene names: 118578929

Gene position: 512499-511603 (Counterclockwise)

Preceding gene: 118578930

Following gene: 118578928

Centisome position: 12.79

GC content: 62.99

Gene sequence:

>897_bases
ATGAAGATCTTCATCAGCGGCGGCACCGGATTCGTAGGCGGGCACCTGATCCGAGAACTCATCAGCCGGGGACACGAACC
GCGCCTGCTGGTACATCGGCGCGCTCCGGCCATCGAGGGGGTGGAGCAGGTCGAGGGGGACGTGACCAGGCCGGAGAGTT
TTCTGGACGCGGCCCAGGGATGTCAGGCAGTCATCAACCTGGTGGGCATCATCCGCGAATTCCCCTCCCGCGGAATCACC
TTCCAGCGACTGCACGTTCAGGCCACCGCCAATATGTTGGCAGCGGCGAAGGCTGCAGGCATCGGGCGCTACCTGCAGAT
GTCGGCCCTGGGTACGCGCAAGGACGCCCGCGCCGAGTACCACCGCAGCAAGTTCCGGGCAGAAGAGCTGGTACGCGCCT
CCGGCCTGGAGTGGACCATCCTGCGCCCCTCGCTGATCTACGGCCCCGGGGACTCGTTCATCAACATGCTGGCCGGACAG
TTGCGTCACGCCCCGGTCATGCCGGTCATGGGCAACGGTCGCTACCGGCTGCAACCGATCCATGCCGATGACGTGGCCCG
CTGTTTCGCCCTCTCCCTGGAGTTGGGCGAGACCATCGCTCACTGCTACGATCTCTGCGGCGCCAACCGGCTCAGCTATC
TGGAACTGCTGGACGCCATAGCCGATGCCATGGGAAAACCGGCGCCGCTCAAGCCCCACGCCCCCCTGGCCCTGATGAAA
CTGATCATCCCGATCATGCAGCACATACCCCAGTTCCCCATCACCAGCGATCAGTTGCGCATGCTGCTGGAGGAGAGCAT
CTGCGACGGCGGCTGGCAAAAAACCTTCGGCTTCGAACCACGCGATTTCAAAGAGGGAATCAGGGAATACCTTAAAAAGG
GGCATGCAAAGACTTGA

Upstream 100 bases:

>100_bases
GTCATGACCGGCATGAAATCAGGGCAGGGCATCTCCTTCACCGGCCAGGGACGGGAGATACGAGGAAGCGGCAGATAACA
GACCAACGGAGGAAGACCCC

Downstream 100 bases:

>100_bases
CCCAGGAGCCCGATTAATGTATAAAACCGTTCTATGTTTAGCCTACGTCATCTAAAAACCTTGGTTTTTCCACTCTGTGC
GTTCATGAGCCTGGCTCCGG

Product: NAD-dependent epimerase/dehydratase

Products: NAD+; ubiquinol

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; NmrA Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; Oxidoreductase Protein; Epimerase; Male Sterility-Like Protein; NAD Dependent Epimerase/Dehydratase/Dehydrogenase; Nucleoside-Diphosphate-Sugar Epimerases; Dtdp-Glucose-46-Dehydratase; NADH Dehydrogenase 1 Alpha Subcomplex; NADH-Ubiquinone Oxireductase; NmrA-Like Protein; DTDP-4-Dehydrorhamnose Reductase RmlD; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; Homolog NADH Dehydrogenase; Methyltransferase FkbM; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKIFISGGTGFVGGHLIRELISRGHEPRLLVHRRAPAIEGVEQVEGDVTRPESFLDAAQGCQAVINLVGIIREFPSRGIT
FQRLHVQATANMLAAAKAAGIGRYLQMSALGTRKDARAEYHRSKFRAEELVRASGLEWTILRPSLIYGPGDSFINMLAGQ
LRHAPVMPVMGNGRYRLQPIHADDVARCFALSLELGETIAHCYDLCGANRLSYLELLDAIADAMGKPAPLKPHAPLALMK
LIIPIMQHIPQFPITSDQLRMLLEESICDGGWQKTFGFEPRDFKEGIREYLKKGHAKT

Sequences:

>Translated_298_residues
MKIFISGGTGFVGGHLIRELISRGHEPRLLVHRRAPAIEGVEQVEGDVTRPESFLDAAQGCQAVINLVGIIREFPSRGIT
FQRLHVQATANMLAAAKAAGIGRYLQMSALGTRKDARAEYHRSKFRAEELVRASGLEWTILRPSLIYGPGDSFINMLAGQ
LRHAPVMPVMGNGRYRLQPIHADDVARCFALSLELGETIAHCYDLCGANRLSYLELLDAIADAMGKPAPLKPHAPLALMK
LIIPIMQHIPQFPITSDQLRMLLEESICDGGWQKTFGFEPRDFKEGIREYLKKGHAKT
>Mature_298_residues
MKIFISGGTGFVGGHLIRELISRGHEPRLLVHRRAPAIEGVEQVEGDVTRPESFLDAAQGCQAVINLVGIIREFPSRGIT
FQRLHVQATANMLAAAKAAGIGRYLQMSALGTRKDARAEYHRSKFRAEELVRASGLEWTILRPSLIYGPGDSFINMLAGQ
LRHAPVMPVMGNGRYRLQPIHADDVARCFALSLELGETIAHCYDLCGANRLSYLELLDAIADAMGKPAPLKPHAPLALMK
LIIPIMQHIPQFPITSDQLRMLLEESICDGGWQKTFGFEPRDFKEGIREYLKKGHAKT

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=226, Percent_Identity=24.3362831858407, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24667554, Length=241, Percent_Identity=27.8008298755187, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 32986; Mature: 32986

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFISGGTGFVGGHLIRELISRGHEPRLLVHRRAPAIEGVEQVEGDVTRPESFLDAAQG
CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHH
CQAVINLVGIIREFPSRGITFQRLHVQATANMLAAAKAAGIGRYLQMSALGTRKDARAEY
HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
HRSKFRAEELVRASGLEWTILRPSLIYGPGDSFINMLAGQLRHAPVMPVMGNGRYRLQPI
HHHHHHHHHHHHHCCCEEEEECCEEEECCCHHHHHHHHHHHHCCCCCEEECCCEEEEEEC
HADDVARCFALSLELGETIAHCYDLCGANRLSYLELLDAIADAMGKPAPLKPHAPLALMK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LIIPIMQHIPQFPITSDQLRMLLEESICDGGWQKTFGFEPRDFKEGIREYLKKGHAKT
HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKIFISGGTGFVGGHLIRELISRGHEPRLLVHRRAPAIEGVEQVEGDVTRPESFLDAAQG
CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHH
CQAVINLVGIIREFPSRGITFQRLHVQATANMLAAAKAAGIGRYLQMSALGTRKDARAEY
HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
HRSKFRAEELVRASGLEWTILRPSLIYGPGDSFINMLAGQLRHAPVMPVMGNGRYRLQPI
HHHHHHHHHHHHHCCCEEEEECCEEEECCCHHHHHHHHHHHHCCCCCEEECCCEEEEEEC
HADDVARCFALSLELGETIAHCYDLCGANRLSYLELLDAIADAMGKPAPLKPHAPLALMK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LIIPIMQHIPQFPITSDQLRMLLEESICDGGWQKTFGFEPRDFKEGIREYLKKGHAKT
HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA