| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118578815
Identifier: 118578815
GI number: 118578815
Start: 384806
End: 386374
Strand: Reverse
Name: 118578815
Synonym: Ppro_0373
Alternate gene names: NA
Gene position: 386374-384806 (Counterclockwise)
Preceding gene: 118578816
Following gene: 118578814
Centisome position: 9.64
GC content: 60.8
Gene sequence:
>1569_bases ATGGCTCTGATGAAAACCCCCGGTGTGTATGTCGTTGAAAAGAATGCCTTCCCCAACTCGGTGGTGGAGGTAGCCACCGC CGTACCGGCGTTCGTCGGCTACACCGAGAAGGCCGACAACAAGGGCAAGTTGCTGGGGAACAAGCCCTGGCGGATCAGTT CCATGGCCGAATTTCACGACTACTTCGGATTCGGCCCGAAGGCTCTGTTCGCCATCGGGGAAGCGGCCACGGTTCCCGGC GACGCCCCGTCGTTTTCCCAGGGAGGTAAGGAGTACTTCCTGGGCCAGGAGTCGGGCAGATACCTGCTCTACAACAGCAT GCTGCTCTTCTACCAGAACGGCGGCGGCCCCTGCTATATCGTCTCGGTGGGAACCTACGGAGAAGCCATCGAGTCGGACC GGCTGACCGGCGGCATCGACACCCTGATCAAGGAACAGGAGCCGACCATGGTTCTGATTCCGGACGCGGTGCTGCTGGCA TCGGCCGAAGAGTGCGTCAGCGTGCAGCAGGCGGCCCTGGCCCATTGCGGCGGGAAGATGAAGAACAGGATCGCCATCCT GGATATCTGGGACGGGTTCAAGGACCGCAAGGACCCCGCCGGCGACTGCATCGAGAATTTCCGCGGCGCCCTGGGAATCA ACTACCTGGACTATGCCGCGGCCTACTATCCCTGGGTCAACACCACCATCGTTCAGGACAAGGATCTCTCCTACGAGAAC CTCTCCACCAGAGAGCTTTTGCAGACCCTGCTCAAGAACGAACTCGCCATCCCCGATCCGCTCCCGACGATCGAGGAGTC GGATCCCCCGGCGGAGAAAAACGCGAAATCCAGACAGATCCAGCGGGCCGACGCCATAGCCGCCATCTCCAGTGAATGGA GCGACATCGCGGCGGACGAGATTCCGGGCCATAAGCAGCTGCTGAACAAGACCCTGATCGCCATCAGCCCGCTGTTCAAC ACCATCCTCATGGAAATCAGACGCAAACTAAACCTGATGCCGCCGGCCGCGGCGATGGCCGGAATCTACACCATGGTGGA TGACTCCCGCGGTGTCTGGAAGGCGCCCGCCAACGTCAGCCTCAGTTCCGTAGTATCGCCGGCGGTCAACATCTCCCACG ACGAACAGGAAGACCTGAACGTCACCACCCAGGGCAAGTCGATCAACGCGATCCGCTCGTTCATCGGCGAGGGGACTCTG GTCTGGGGGGCGCGCACCCTGGACGGCAACAGCCTGGACTGGCGCTATGTCAATGTGCGCAGAACCATGATCATGTTGGA GGAATCGATCAAACTGGCGAGCAAGGCGTATGTGTTCGAAAACAACGTGGCCACCACCTGGGTGACCATCAAGAGCATGA TCCGCAATTTCCTGACCGGAATCTGGAAGCGGGGCGGTCTCGCCGGAGCGAGTCCCGACGACGCCTTCGCCGTGTTCTGC GGCCTGGGAGAAACCATGACCCCCGAAGACATCCTGGAGGGGATCCTGCGGGTCACCGTCCTGGTGGCGGTCATGCGTCC GGCGGAGTTCATCGAGATCACCTTCCAGCAGCAGATGCAGAAGTCGTAA
Upstream 100 bases:
>100_bases GGTCGCCCCGGCGAGGAGAATTGATCGGGAAACGATCGATGGCAACGAAGCGGCAGTATCGGAACTGTTCATCAACTCGT AAGCGCAAAGGAGAAACCGT
Downstream 100 bases:
>100_bases CCGGTTAAGAACGGCATCTCCGGCCGGAGCGGGGCAGCGAGTCGCACCTGGCGGAGGCGCCCCATGGGCCCGGGCACGAC GAAAAACCAACAATTTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein Gp; Phage Tail Sheath Family Protein; Phage Tail Sheath Protein Fi-Like Protein; LOW QUALITY PROTEIN Phage Tail Sheath Protein; Cytoplasmic Fibril Protein; Phage Tail Sheath Protein Fi-Like; Phage SPO1 DNA Polymerase-Related Protein; Bacteriophage Tail Sheath Protein; Phage Tail Sheath Protein FI-Like Protein; Phage Protein
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MALMKTPGVYVVEKNAFPNSVVEVATAVPAFVGYTEKADNKGKLLGNKPWRISSMAEFHDYFGFGPKALFAIGEAATVPG DAPSFSQGGKEYFLGQESGRYLLYNSMLLFYQNGGGPCYIVSVGTYGEAIESDRLTGGIDTLIKEQEPTMVLIPDAVLLA SAEECVSVQQAALAHCGGKMKNRIAILDIWDGFKDRKDPAGDCIENFRGALGINYLDYAAAYYPWVNTTIVQDKDLSYEN LSTRELLQTLLKNELAIPDPLPTIEESDPPAEKNAKSRQIQRADAIAAISSEWSDIAADEIPGHKQLLNKTLIAISPLFN TILMEIRRKLNLMPPAAAMAGIYTMVDDSRGVWKAPANVSLSSVVSPAVNISHDEQEDLNVTTQGKSINAIRSFIGEGTL VWGARTLDGNSLDWRYVNVRRTMIMLEESIKLASKAYVFENNVATTWVTIKSMIRNFLTGIWKRGGLAGASPDDAFAVFC GLGETMTPEDILEGILRVTVLVAVMRPAEFIEITFQQQMQKS
Sequences:
>Translated_522_residues MALMKTPGVYVVEKNAFPNSVVEVATAVPAFVGYTEKADNKGKLLGNKPWRISSMAEFHDYFGFGPKALFAIGEAATVPG DAPSFSQGGKEYFLGQESGRYLLYNSMLLFYQNGGGPCYIVSVGTYGEAIESDRLTGGIDTLIKEQEPTMVLIPDAVLLA SAEECVSVQQAALAHCGGKMKNRIAILDIWDGFKDRKDPAGDCIENFRGALGINYLDYAAAYYPWVNTTIVQDKDLSYEN LSTRELLQTLLKNELAIPDPLPTIEESDPPAEKNAKSRQIQRADAIAAISSEWSDIAADEIPGHKQLLNKTLIAISPLFN TILMEIRRKLNLMPPAAAMAGIYTMVDDSRGVWKAPANVSLSSVVSPAVNISHDEQEDLNVTTQGKSINAIRSFIGEGTL VWGARTLDGNSLDWRYVNVRRTMIMLEESIKLASKAYVFENNVATTWVTIKSMIRNFLTGIWKRGGLAGASPDDAFAVFC GLGETMTPEDILEGILRVTVLVAVMRPAEFIEITFQQQMQKS >Mature_521_residues ALMKTPGVYVVEKNAFPNSVVEVATAVPAFVGYTEKADNKGKLLGNKPWRISSMAEFHDYFGFGPKALFAIGEAATVPGD APSFSQGGKEYFLGQESGRYLLYNSMLLFYQNGGGPCYIVSVGTYGEAIESDRLTGGIDTLIKEQEPTMVLIPDAVLLAS AEECVSVQQAALAHCGGKMKNRIAILDIWDGFKDRKDPAGDCIENFRGALGINYLDYAAAYYPWVNTTIVQDKDLSYENL STRELLQTLLKNELAIPDPLPTIEESDPPAEKNAKSRQIQRADAIAAISSEWSDIAADEIPGHKQLLNKTLIAISPLFNT ILMEIRRKLNLMPPAAAMAGIYTMVDDSRGVWKAPANVSLSSVVSPAVNISHDEQEDLNVTTQGKSINAIRSFIGEGTLV WGARTLDGNSLDWRYVNVRRTMIMLEESIKLASKAYVFENNVATTWVTIKSMIRNFLTGIWKRGGLAGASPDDAFAVFCG LGETMTPEDILEGILRVTVLVAVMRPAEFIEITFQQQMQKS
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57167; Mature: 57036
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00139 THIOL_PROTEASE_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALMKTPGVYVVEKNAFPNSVVEVATAVPAFVGYTEKADNKGKLLGNKPWRISSMAEFHD CCCEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH YFGFGPKALFAIGEAATVPGDAPSFSQGGKEYFLGQESGRYLLYNSMLLFYQNGGGPCYI HHCCCHHHHHEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEEEECCCCEEEE VSVGTYGEAIESDRLTGGIDTLIKEQEPTMVLIPDAVLLASAEECVSVQQAALAHCGGKM EEECCCCHHHHCCCCCCCHHHHHCCCCCCEEEECCHHHHHCHHHHHHHHHHHHHHCCCHH KNRIAILDIWDGFKDRKDPAGDCIENFRGALGINYLDYAAAYYPWVNTTIVQDKDLSYEN HCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCC LSTRELLQTLLKNELAIPDPLPTIEESDPPAEKNAKSRQIQRADAIAAISSEWSDIAADE CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHC IPGHKQLLNKTLIAISPLFNTILMEIRRKLNLMPPAAAMAGIYTMVDDSRGVWKAPANVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCCEECCCCCC LSSVVSPAVNISHDEQEDLNVTTQGKSINAIRSFIGEGTLVWGARTLDGNSLDWRYVNVR HHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEHH RTMIMLEESIKLASKAYVFENNVATTWVTIKSMIRNFLTGIWKRGGLAGASPDDAFAVFC HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE GLGETMTPEDILEGILRVTVLVAVMRPAEFIEITFQQQMQKS CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure ALMKTPGVYVVEKNAFPNSVVEVATAVPAFVGYTEKADNKGKLLGNKPWRISSMAEFHD CCEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH YFGFGPKALFAIGEAATVPGDAPSFSQGGKEYFLGQESGRYLLYNSMLLFYQNGGGPCYI HHCCCHHHHHEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEEEECCCCEEEE VSVGTYGEAIESDRLTGGIDTLIKEQEPTMVLIPDAVLLASAEECVSVQQAALAHCGGKM EEECCCCHHHHCCCCCCCHHHHHCCCCCCEEEECCHHHHHCHHHHHHHHHHHHHHCCCHH KNRIAILDIWDGFKDRKDPAGDCIENFRGALGINYLDYAAAYYPWVNTTIVQDKDLSYEN HCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCC LSTRELLQTLLKNELAIPDPLPTIEESDPPAEKNAKSRQIQRADAIAAISSEWSDIAADE CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHC IPGHKQLLNKTLIAISPLFNTILMEIRRKLNLMPPAAAMAGIYTMVDDSRGVWKAPANVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCCEECCCCCC LSSVVSPAVNISHDEQEDLNVTTQGKSINAIRSFIGEGTLVWGARTLDGNSLDWRYVNVR HHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEHH RTMIMLEESIKLASKAYVFENNVATTWVTIKSMIRNFLTGIWKRGGLAGASPDDAFAVFC HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE GLGETMTPEDILEGILRVTVLVAVMRPAEFIEITFQQQMQKS CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA