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The map label for this gene is ubiX [C]

Identifier: 118578731

GI number: 118578731

Start: 286049

End: 286651

Strand: Reverse

Name: ubiX [C]

Synonym: Ppro_0289

Alternate gene names: 118578731

Gene position: 286651-286049 (Counterclockwise)

Preceding gene: 118578732

Following gene: 118578729

Centisome position: 7.15

GC content: 66.83

Gene sequence:

>603_bases
ATGAAACGACAACGAATCCTGCTGGCCCTGTCCGGTGCCTCCGGCGCCATCTACGGCCTGCGCCTGGCGCGGGAACTGGC
ACGCCGGGACGTGGAACTGACCCTCACCGCCACCCCCAGCGGCAGGCTTGTCTGCCGGGAGGAAACCGGCCTGGACCTGT
CCGGCGACCCGGTCGAGGCCGGGATACGGCTGGCCGGCCACCTCGGCCTGAAAACTGCCATCAGGGTGGTGGCGCCGGAC
GACCTCTTCTTCGCCTCGGCCAGCGGCTCGGCCGCGCCGGACGCCATGATCGTCTGCCCCTGCAGCATGGGCACCCTGGG
ACGGATCGCCGCCGGAATCTCCGCTAACCTGATCGAGCGCAGCGCCGACGTCATGCTCAAGGAACACCGGCCGCTGCTGC
TGGCACCCCGCGAGACCCCCTTAAGCGAAATCCACCTGGAGAACATGCTCAGGCTGGCCCGTGCCGGGGCGCGCATCATC
CCCGCCATGCCGGCGTTTTACCACCAGCCGCGAACTCTGGACGACATGATCGATTTTGTGGTCGGAAAGATTCTGGATCA
GGCGGGGTTTGAAAACAGCCTCTACCGCAGGTGGTCGGACTAG

Upstream 100 bases:

>100_bases
GCGACCTGACCAGGCTGGACGCGGCGTTCTTCAACATGAACGGCTACATCAGCGTCGTCTTCCTGCTGGGCACGGCGGCT
GAAGTGCTGACGAGGCAGGC

Downstream 100 bases:

>100_bases
GGAGCGTCGAGCGGGACGCCCCCTGGTCACGGCTCCAGTAGAATGGCAGGTTCATGCCTCCAGCACGAACTCCATGATGG
TGCGGGCGAGCTTCTCGGTG

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKRQRILLALSGASGAIYGLRLARELARRDVELTLTATPSGRLVCREETGLDLSGDPVEAGIRLAGHLGLKTAIRVVAPD
DLFFASASGSAAPDAMIVCPCSMGTLGRIAAGISANLIERSADVMLKEHRPLLLAPRETPLSEIHLENMLRLARAGARII
PAMPAFYHQPRTLDDMIDFVVGKILDQAGFENSLYRRWSD

Sequences:

>Translated_200_residues
MKRQRILLALSGASGAIYGLRLARELARRDVELTLTATPSGRLVCREETGLDLSGDPVEAGIRLAGHLGLKTAIRVVAPD
DLFFASASGSAAPDAMIVCPCSMGTLGRIAAGISANLIERSADVMLKEHRPLLLAPRETPLSEIHLENMLRLARAGARII
PAMPAFYHQPRTLDDMIDFVVGKILDQAGFENSLYRRWSD
>Mature_200_residues
MKRQRILLALSGASGAIYGLRLARELARRDVELTLTATPSGRLVCREETGLDLSGDPVEAGIRLAGHLGLKTAIRVVAPD
DLFFASASGSAAPDAMIVCPCSMGTLGRIAAGISANLIERSADVMLKEHRPLLLAPRETPLSEIHLENMLRLARAGARII
PAMPAFYHQPRTLDDMIDFVVGKILDQAGFENSLYRRWSD

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=201, Percent_Identity=39.8009950248756, Blast_Score=120, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6320746, Length=195, Percent_Identity=41.5384615384615, Blast_Score=138, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21673; Mature: 21673

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQRILLALSGASGAIYGLRLARELARRDVELTLTATPSGRLVCREETGLDLSGDPVEA
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCCCCEEEECCCCCCCCCCCHHH
GIRLAGHLGLKTAIRVVAPDDLFFASASGSAAPDAMIVCPCSMGTLGRIAAGISANLIER
HHHHHHCCCHHHEEEEECCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHCCHHHHHHH
SADVMLKEHRPLLLAPRETPLSEIHLENMLRLARAGARIIPAMPAFYHQPRTLDDMIDFV
HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHH
VGKILDQAGFENSLYRRWSD
HHHHHHHCCCCCHHHHCCCC
>Mature Secondary Structure
MKRQRILLALSGASGAIYGLRLARELARRDVELTLTATPSGRLVCREETGLDLSGDPVEA
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCCCCEEEECCCCCCCCCCCHHH
GIRLAGHLGLKTAIRVVAPDDLFFASASGSAAPDAMIVCPCSMGTLGRIAAGISANLIER
HHHHHHCCCHHHEEEEECCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHCCHHHHHHH
SADVMLKEHRPLLLAPRETPLSEIHLENMLRLARAGARIIPAMPAFYHQPRTLDDMIDFV
HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHH
VGKILDQAGFENSLYRRWSD
HHHHHHHCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]