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The map label for this gene is traC [H]

Identifier: 118578696

GI number: 118578696

Start: 251608

End: 254055

Strand: Reverse

Name: traC [H]

Synonym: Ppro_0253

Alternate gene names: 118578696

Gene position: 254055-251608 (Counterclockwise)

Preceding gene: 118578697

Following gene: 118578695

Centisome position: 6.34

GC content: 55.8

Gene sequence:

>2448_bases
ATGGGCGTTGTTTCAGCGTTACTTGGAAGCGGAGGAGGCGTCACCAGAAAGGAACTGCTCAGCCTTGTCGAGCGGGACAG
ATTCTCCGAGTATTTTCCCTGGATCGCCCATGATCCAAGGAAACAGATCTACCTCAACACCGACAATACCTTCGGGATGA
TGTGGGAGTGCGCTCCCCTGGCATTTGCGTGTGAGACTACCATCAGGACCCTTGAAGGTCTATTTCGCGTCAATCTGCCT
GAAGGCTCGATCATGCAGTTCATTCTGCTGGCCGATCCCTTCGTGAAAAGGATGGTTGACACCTACACCGCCATGAAGAC
GCGAGACAGCAAACTGGTGAGGAGTGTCTCTGATAACGTGTCACGCTTCTTTCAGGAAGGAGCAGAAGGGCTTGACTGTC
TGAACGGCATCCCGGTTCGAAACTTCCGGATGTTTTTCTGCGTCAAGTTCCCGGTCAAGAGCAGCCCGCACGTCAATCTC
GAAGAGGTGTTCGGCACCATCCAGGAAGTATTGAAAGGCGCCGGCCTCTCGCCGGTCGCGGTCGAGCCTGGGCGGCTTCT
GGACTGGCTGCGGCGCATGCTGAACGACGACCCATCCGCCAATGCCAGTCACTATGACGAACGCAATGTCATCCGCAAGC
AGGTACTGCTCGGGACAAAGGTGGAGAAGAGGTTCTCGTCACTCAAATTCGGCTCTCGCCACTTCCGTTGTGTCACTCCC
AAATCCTTTCCCCCTGATGGCGACCCGATCCAGACCAACCAGCTTTTCGGAGGGATCATGGGCATGGCGACCGACGCCGA
CCAGATTCGGACGCCATTTTTCTTCACGCTGAACATAGTCCTGCGCAACCAGAAGAACAGACTCCACACCAAATGCAATC
TGGTCCTGCAGCAGCAGGGGGTCGGCAGCTTCGCCCCGTCGCTGGCCAGGAAGAAAGACGAATATCTCTGGGCGGTGGAC
GAACTGGAGAGGGGCACCAGGTTTTACCGGATCATCCCGATCATGTGGGTCTACGGCAGCGACGAGTGGCTGGTGAACGA
GTCCGTAACCCGGGCCAAACGGGTCTGGGAGGGGCAAGGGTATGTCATGCAGGAAGACAAAGGGATTCTCCCCATCCTGT
TCATCTCATCTCTTCCATTCGGGCTCTACGACCACGGCAGCAATATCGACACCCTCGACCGGGACCACATCATGCCGGTG
GACAGCATCGCCGTCACCTTGCCGATCCAGGGTGATTTCTCGGGTCTCGGCAAGCCGGTCATGCTCTTTGCCGGGCGAAA
AGGGAACCTGTTCGGTCTCGATATCTTCAACAAGGGGGTCAATAACCACAACGTCGTGGTCTGTGCTTCCAGCGGAGCGG
GGAAAAGTTTCTTCACCAACTATCTGGTCTACAACTACTTCGCCATGAACTCCAGGATCAGGATCGTGGATATCGGCGGC
TCCTACAAGAAGATGACCAAGCTGTTCGGAGCCCGTTATCTGGATTTCAGCGAGGATTCCCAGGTCTGTCTGAATCCCTT
TACCACCATCATCGATCCCGAGTATGACATCCCGGTCATCGCCCCCATCGTCGCTCAGATGGTCTATTCCACCGGGAAGA
CCTTTCCCAGCGAAACCGAGATGACCCTCATCAAGCAGGCCGTGCGCTGGGCATGGCAGCAGGAGGGGAATGACGCCGGC
ATCGATACCGTCTACGAATACCTGGCCAATTTCGACCGCTACTCCTCAGAAGGAACGGAAATCAAAGAGGCTGCCTCCCG
GTTGGCCTTCAACCTGGCCGATTTCAGGAGCGACGGTTCCTTTGGCCGTTTCTTCAACGGTAAAAGCAGCCTCGACATCT
CCAACGACGAGTTCGTGGTTCTCGAACTGGAGCATCTCAAGTCCAGAAAAGAGCTGTTCCGGGTGGTCACCCTCCAGGTG
ATCAACGCCGTTACCCAGGATCTCTACCTTTCCGACAAGTCGGACCAGCGTCTGATCGTCTTTGACGAGGCGTGGCAATT
CCTCGGGGAGAGTTCGACCCTGAAGGAGGTCATCGAGGAAGGGTACCGCCGGGCCCGGAAGTACTTCGGCAGCTTCACCA
TCATCACCCAGTCGGTGCTCGACATGAAACTCTTCGGCGGAGTCGGAGACGTGATCAGAAACAATTCCGCCTTCAAGTTC
TTCCTGGAATCGTCGGACTTCGAAAAAGCCCTGGACGAGAAGCTTTTGGACTACGACGACTTCACCATGCGGATTCTCAA
GTCCACCAAGAGCAACAAGCCCAAGTATTCGGAGATTTTTATGGATACCCCGTTCGGGGTGGGTGTCGGCAGGCTGGTGG
TTGATCCTTTTTCCTACTACGTGTTCACGTCCGATGCGAGCGAGATCGCGCAGATCGAAGCAATGGTGGATGGCGGGATG
AGTTACGAGGATGCGATCCGTGAGATGGTCAAGAAGTATCGCAGCTAG

Upstream 100 bases:

>100_bases
AGGACAACGAATTCTATATGCTGCGCTACGTGTATTTTTTCGTGGATGAACCGCGCTGGCTGCTGGATGGCTCCGTCATG
TCGGGCGAGGAGGAGTAGGA

Downstream 100 bases:

>100_bases
CCTGACTGTGGCCCAGATGCTCATAAGTTCCAATGCCCTGGCCGTCGACGGGAAGGCTGCCGGCCAGAGTGCCGGTCAGA
CGGCGCTCTCCCGATTCGGC

Product: sex pilus assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 815; Mature: 814

Protein sequence:

>815_residues
MGVVSALLGSGGGVTRKELLSLVERDRFSEYFPWIAHDPRKQIYLNTDNTFGMMWECAPLAFACETTIRTLEGLFRVNLP
EGSIMQFILLADPFVKRMVDTYTAMKTRDSKLVRSVSDNVSRFFQEGAEGLDCLNGIPVRNFRMFFCVKFPVKSSPHVNL
EEVFGTIQEVLKGAGLSPVAVEPGRLLDWLRRMLNDDPSANASHYDERNVIRKQVLLGTKVEKRFSSLKFGSRHFRCVTP
KSFPPDGDPIQTNQLFGGIMGMATDADQIRTPFFFTLNIVLRNQKNRLHTKCNLVLQQQGVGSFAPSLARKKDEYLWAVD
ELERGTRFYRIIPIMWVYGSDEWLVNESVTRAKRVWEGQGYVMQEDKGILPILFISSLPFGLYDHGSNIDTLDRDHIMPV
DSIAVTLPIQGDFSGLGKPVMLFAGRKGNLFGLDIFNKGVNNHNVVVCASSGAGKSFFTNYLVYNYFAMNSRIRIVDIGG
SYKKMTKLFGARYLDFSEDSQVCLNPFTTIIDPEYDIPVIAPIVAQMVYSTGKTFPSETEMTLIKQAVRWAWQQEGNDAG
IDTVYEYLANFDRYSSEGTEIKEAASRLAFNLADFRSDGSFGRFFNGKSSLDISNDEFVVLELEHLKSRKELFRVVTLQV
INAVTQDLYLSDKSDQRLIVFDEAWQFLGESSTLKEVIEEGYRRARKYFGSFTIITQSVLDMKLFGGVGDVIRNNSAFKF
FLESSDFEKALDEKLLDYDDFTMRILKSTKSNKPKYSEIFMDTPFGVGVGRLVVDPFSYYVFTSDASEIAQIEAMVDGGM
SYEDAIREMVKKYRS

Sequences:

>Translated_815_residues
MGVVSALLGSGGGVTRKELLSLVERDRFSEYFPWIAHDPRKQIYLNTDNTFGMMWECAPLAFACETTIRTLEGLFRVNLP
EGSIMQFILLADPFVKRMVDTYTAMKTRDSKLVRSVSDNVSRFFQEGAEGLDCLNGIPVRNFRMFFCVKFPVKSSPHVNL
EEVFGTIQEVLKGAGLSPVAVEPGRLLDWLRRMLNDDPSANASHYDERNVIRKQVLLGTKVEKRFSSLKFGSRHFRCVTP
KSFPPDGDPIQTNQLFGGIMGMATDADQIRTPFFFTLNIVLRNQKNRLHTKCNLVLQQQGVGSFAPSLARKKDEYLWAVD
ELERGTRFYRIIPIMWVYGSDEWLVNESVTRAKRVWEGQGYVMQEDKGILPILFISSLPFGLYDHGSNIDTLDRDHIMPV
DSIAVTLPIQGDFSGLGKPVMLFAGRKGNLFGLDIFNKGVNNHNVVVCASSGAGKSFFTNYLVYNYFAMNSRIRIVDIGG
SYKKMTKLFGARYLDFSEDSQVCLNPFTTIIDPEYDIPVIAPIVAQMVYSTGKTFPSETEMTLIKQAVRWAWQQEGNDAG
IDTVYEYLANFDRYSSEGTEIKEAASRLAFNLADFRSDGSFGRFFNGKSSLDISNDEFVVLELEHLKSRKELFRVVTLQV
INAVTQDLYLSDKSDQRLIVFDEAWQFLGESSTLKEVIEEGYRRARKYFGSFTIITQSVLDMKLFGGVGDVIRNNSAFKF
FLESSDFEKALDEKLLDYDDFTMRILKSTKSNKPKYSEIFMDTPFGVGVGRLVVDPFSYYVFTSDASEIAQIEAMVDGGM
SYEDAIREMVKKYRS
>Mature_814_residues
GVVSALLGSGGGVTRKELLSLVERDRFSEYFPWIAHDPRKQIYLNTDNTFGMMWECAPLAFACETTIRTLEGLFRVNLPE
GSIMQFILLADPFVKRMVDTYTAMKTRDSKLVRSVSDNVSRFFQEGAEGLDCLNGIPVRNFRMFFCVKFPVKSSPHVNLE
EVFGTIQEVLKGAGLSPVAVEPGRLLDWLRRMLNDDPSANASHYDERNVIRKQVLLGTKVEKRFSSLKFGSRHFRCVTPK
SFPPDGDPIQTNQLFGGIMGMATDADQIRTPFFFTLNIVLRNQKNRLHTKCNLVLQQQGVGSFAPSLARKKDEYLWAVDE
LERGTRFYRIIPIMWVYGSDEWLVNESVTRAKRVWEGQGYVMQEDKGILPILFISSLPFGLYDHGSNIDTLDRDHIMPVD
SIAVTLPIQGDFSGLGKPVMLFAGRKGNLFGLDIFNKGVNNHNVVVCASSGAGKSFFTNYLVYNYFAMNSRIRIVDIGGS
YKKMTKLFGARYLDFSEDSQVCLNPFTTIIDPEYDIPVIAPIVAQMVYSTGKTFPSETEMTLIKQAVRWAWQQEGNDAGI
DTVYEYLANFDRYSSEGTEIKEAASRLAFNLADFRSDGSFGRFFNGKSSLDISNDEFVVLELEHLKSRKELFRVVTLQVI
NAVTQDLYLSDKSDQRLIVFDEAWQFLGESSTLKEVIEEGYRRARKYFGSFTIITQSVLDMKLFGGVGDVIRNNSAFKFF
LESSDFEKALDEKLLDYDDFTMRILKSTKSNKPKYSEIFMDTPFGVGVGRLVVDPFSYYVFTSDASEIAQIEAMVDGGMS
YEDAIREMVKKYRS

Specific function: Required for the assembly of mature F-pilin subunits into extended F pili [H]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR014117 [H]

Pfam domain/function: PF01935 DUF87 [H]

EC number: NA

Molecular weight: Translated: 92402; Mature: 92270

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVVSALLGSGGGVTRKELLSLVERDRFSEYFPWIAHDPRKQIYLNTDNTFGMMWECAPL
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCH
AFACETTIRTLEGLFRVNLPEGSIMQFILLADPFVKRMVDTYTAMKTRDSKLVRSVSDNV
HHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRFFQEGAEGLDCLNGIPVRNFRMFFCVKFPVKSSPHVNLEEVFGTIQEVLKGAGLSPVA
HHHHHHCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEE
VEPGRLLDWLRRMLNDDPSANASHYDERNVIRKQVLLGTKVEKRFSSLKFGSRHFRCVTP
ECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECC
KSFPPDGDPIQTNQLFGGIMGMATDADQIRTPFFFTLNIVLRNQKNRLHTKCNLVLQQQG
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCEEEEEEEEEECCCCHHHHHHHEEEEECC
VGSFAPSLARKKDEYLWAVDELERGTRFYRIIPIMWVYGSDEWLVNESVTRAKRVWEGQG
CCCCCHHHHHCCHHHEEEHHHHHCCCEEEEEEEEEEEECCCCEEECHHHHHHHHHHCCCC
YVMQEDKGILPILFISSLPFGLYDHGSNIDTLDRDHIMPVDSIAVTLPIQGDFSGLGKPV
EEEECCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCE
MLFAGRKGNLFGLDIFNKGVNNHNVVVCASSGAGKSFFTNYLVYNYFAMNSRIRIVDIGG
EEEECCCCCEEEEHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEECCEEEEEECCC
SYKKMTKLFGARYLDFSEDSQVCLNPFTTIIDPEYDIPVIAPIVAQMVYSTGKTFPSETE
CHHHHHHHHCCCCCCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH
MTLIKQAVRWAWQQEGNDAGIDTVYEYLANFDRYSSEGTEIKEAASRLAFNLADFRSDGS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
FGRFFNGKSSLDISNDEFVVLELEHLKSRKELFRVVTLQVINAVTQDLYLSDKSDQRLIV
CCCEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEE
FDEAWQFLGESSTLKEVIEEGYRRARKYFGSFTIITQSVLDMKLFGGVGDVIRNNSAFKF
EHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCCCEEEE
FLESSDFEKALDEKLLDYDDFTMRILKSTKSNKPKYSEIFMDTPFGVGVGRLVVDPFSYY
EECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCHHEECCCEEE
VFTSDASEIAQIEAMVDGGMSYEDAIREMVKKYRS
EEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
GVVSALLGSGGGVTRKELLSLVERDRFSEYFPWIAHDPRKQIYLNTDNTFGMMWECAPL
CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCH
AFACETTIRTLEGLFRVNLPEGSIMQFILLADPFVKRMVDTYTAMKTRDSKLVRSVSDNV
HHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRFFQEGAEGLDCLNGIPVRNFRMFFCVKFPVKSSPHVNLEEVFGTIQEVLKGAGLSPVA
HHHHHHCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEE
VEPGRLLDWLRRMLNDDPSANASHYDERNVIRKQVLLGTKVEKRFSSLKFGSRHFRCVTP
ECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECC
KSFPPDGDPIQTNQLFGGIMGMATDADQIRTPFFFTLNIVLRNQKNRLHTKCNLVLQQQG
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCEEEEEEEEEECCCCHHHHHHHEEEEECC
VGSFAPSLARKKDEYLWAVDELERGTRFYRIIPIMWVYGSDEWLVNESVTRAKRVWEGQG
CCCCCHHHHHCCHHHEEEHHHHHCCCEEEEEEEEEEEECCCCEEECHHHHHHHHHHCCCC
YVMQEDKGILPILFISSLPFGLYDHGSNIDTLDRDHIMPVDSIAVTLPIQGDFSGLGKPV
EEEECCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCE
MLFAGRKGNLFGLDIFNKGVNNHNVVVCASSGAGKSFFTNYLVYNYFAMNSRIRIVDIGG
EEEECCCCCEEEEHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEECCEEEEEECCC
SYKKMTKLFGARYLDFSEDSQVCLNPFTTIIDPEYDIPVIAPIVAQMVYSTGKTFPSETE
CHHHHHHHHCCCCCCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH
MTLIKQAVRWAWQQEGNDAGIDTVYEYLANFDRYSSEGTEIKEAASRLAFNLADFRSDGS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
FGRFFNGKSSLDISNDEFVVLELEHLKSRKELFRVVTLQVINAVTQDLYLSDKSDQRLIV
CCCEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEE
FDEAWQFLGESSTLKEVIEEGYRRARKYFGSFTIITQSVLDMKLFGGVGDVIRNNSAFKF
EHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCCCEEEE
FLESSDFEKALDEKLLDYDDFTMRILKSTKSNKPKYSEIFMDTPFGVGVGRLVVDPFSYY
EECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCHHEECCCEEE
VFTSDASEIAQIEAMVDGGMSYEDAIREMVKKYRS
EEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2265751; 7915817; 1355084 [H]