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The map label for this gene is traN [H]

Identifier: 118578694

GI number: 118578694

Start: 247825

End: 249666

Strand: Reverse

Name: traN [H]

Synonym: Ppro_0251

Alternate gene names: 118578694

Gene position: 249666-247825 (Counterclockwise)

Preceding gene: 118578695

Following gene: 118578693

Centisome position: 6.23

GC content: 59.5

Gene sequence:

>1842_bases
ATGCTCGTCCGTGTCGTCTGTTCACTATGTTATGTCACGCTTCTGCTCTCGCTCTCGGGTGCCCACCAGACGGCGCTGGC
TCTTGTCAGTTGCCAGGACAGGATTTCGGCAAATACGCCGCATCGTTACATCGATGCTCTGGCACTGTTCACCGAGTACA
ACGGCACAACCTATGCCATCGCCAAATCGGCCGTGAGCGGCAGCCAGTCGCTGCCGGACGGCTATTTCAATTTCGAGGCG
AACATCAGCCGGGAATACCTGACGACCGGAACCGATACGGCATCACTCAAACGGATGCTCGCCCTTGGTCGATTCGGTGA
GGCCAGGCCGGTCAGGATCGACAGTCGGCAGACGCTGGATTTCGTTCTCAAACGTTTCGGAGCCTATCTCGGTTCGGCGG
ATTCCCCACAAAGCACCTACATCGACGCTTGGAAGGAGTTCGGCCTGACCGGTTTTACCGCCCTTGCCGGTACGGGACTT
CCTTTCACCAACTGGGGCACGGGAACACCCTATGGGGGACAGGATCCGCAAGCGGTAGTCATGGGACGTGACGGGATCTG
GACCAGCGGCCTGGATGGGGTCAGGTCGTCCCAGATCGTACAGTTTCCCGGCAAACTGGACTGTTCGTATTCCTACATCG
ATCCGACGACGCTACCGCCGGTATCGCCACCCGCTACCGAGACGTTCGGCACCATCATCTGCGCCCAGGACCTGAACAAC
AATGGCTATGCCGCCGATCCGGGCGAGGTGGCCACCTGTGTTGTGACGCCACAGGGGCAGTACTGTCCGGTGGGTTCCGT
CGAGTGCAATCTGGTCAACTCGGCATACGTCTGCCCGCTGGGCTCCCAGTACGTTTGCATGGAATACCAGGGTGTGATGC
GTTGCTCGTCGAATTCCTGCTTCGATCAAACAACGACTGAGGAGGAGGCAGATGACATCGATGAATCGATGCTGCGGGAC
GACGGGGATCGGGATGCCCTGGGGCAGTGTCTCGGGCAGTTGTACGTCTTCAACGGCAAGGCGTCCCGCTGTCGCCCGCC
GGGGATGAAGGTGGGGATGATCAACGATTGCTGCGAGAGCGACCAGGTGGCTGCGGAAGACACCGGTAACAGTATCCTGT
CGGCGACGCAGGGGATTCAGATGGCATACGAGATCGGTCAGGTCGCCTACTACGGCAATGCCCTGCTGACCGGCGCCGCC
CAGATTTCGGCCATCACCACGACCGCAACCGGCACGGTCGCGTCCATGACCGTGGTCACCGCGGCCGGAACCACCACGAC
CCTGTCGGGAGCGGTGGCAACCGGAGCCTACGCCACCATGGCCAGCGGCGCTACGGGAGCCTCGGCCATCGGCGCAGGCC
TGCAGGCCTATGCCACGGCGCTGTTAAATCCGGCAACCATTGCCGTTGCCGTGGCTGTCATGGTGGTGATGAAGCTGTTG
ATGGGGGGAGGCTGTGATCAGGGAGATATTCAGACGGCGATGCAGAATGCCGCCAAGGATTGCCACTATGTGGGCAGTTA
CTGTCAGAAGAAATGGCCGCTGGTGGGGTGTGTCCAGAAGGCCAAGAGCTACTGCTGTTTCAACTCGAAAATGGCAAGGA
TTATCCATGAGCAGGGAAGACCACAACTCCTGCCGTTCCAGCCGAACGGCGCCTGGGGGAGCGCGAAACACCCGAACTGC
AGAGGATTCACGCCCGAAGAATTTCAGGCACTGGATTTCTCGCGGATCGATCTTTCTGAATATTTCGCGGACGTGCAGAA
GGATCTGGCCACCAAGATCCAGGGATCGCAGCAAACGATCATGCAGAACATCCAGAACAGATATCAGGCGGCGCCAAAAT
GA

Upstream 100 bases:

>100_bases
TTGCCGAATCCGCATCCGTGTTCCAGGTACTCAGACTGGCGGGAAAGGACTCCATCTGTTCCAGCGGCCTGAAACAGCCC
GTGCAGTCGAGGTGAGCCGT

Downstream 100 bases:

>100_bases
TCATTCGTACCGGACTGGCAGCGATTGTCCTTTTGGTGGGCGTTTCATCGGCTCATGCCAAAGAGCTTGGCGTCTTCGGC
ATGACGTACCGGATCGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 613; Mature: 613

Protein sequence:

>613_residues
MLVRVVCSLCYVTLLLSLSGAHQTALALVSCQDRISANTPHRYIDALALFTEYNGTTYAIAKSAVSGSQSLPDGYFNFEA
NISREYLTTGTDTASLKRMLALGRFGEARPVRIDSRQTLDFVLKRFGAYLGSADSPQSTYIDAWKEFGLTGFTALAGTGL
PFTNWGTGTPYGGQDPQAVVMGRDGIWTSGLDGVRSSQIVQFPGKLDCSYSYIDPTTLPPVSPPATETFGTIICAQDLNN
NGYAADPGEVATCVVTPQGQYCPVGSVECNLVNSAYVCPLGSQYVCMEYQGVMRCSSNSCFDQTTTEEEADDIDESMLRD
DGDRDALGQCLGQLYVFNGKASRCRPPGMKVGMINDCCESDQVAAEDTGNSILSATQGIQMAYEIGQVAYYGNALLTGAA
QISAITTTATGTVASMTVVTAAGTTTTLSGAVATGAYATMASGATGASAIGAGLQAYATALLNPATIAVAVAVMVVMKLL
MGGGCDQGDIQTAMQNAAKDCHYVGSYCQKKWPLVGCVQKAKSYCCFNSKMARIIHEQGRPQLLPFQPNGAWGSAKHPNC
RGFTPEEFQALDFSRIDLSEYFADVQKDLATKIQGSQQTIMQNIQNRYQAAPK

Sequences:

>Translated_613_residues
MLVRVVCSLCYVTLLLSLSGAHQTALALVSCQDRISANTPHRYIDALALFTEYNGTTYAIAKSAVSGSQSLPDGYFNFEA
NISREYLTTGTDTASLKRMLALGRFGEARPVRIDSRQTLDFVLKRFGAYLGSADSPQSTYIDAWKEFGLTGFTALAGTGL
PFTNWGTGTPYGGQDPQAVVMGRDGIWTSGLDGVRSSQIVQFPGKLDCSYSYIDPTTLPPVSPPATETFGTIICAQDLNN
NGYAADPGEVATCVVTPQGQYCPVGSVECNLVNSAYVCPLGSQYVCMEYQGVMRCSSNSCFDQTTTEEEADDIDESMLRD
DGDRDALGQCLGQLYVFNGKASRCRPPGMKVGMINDCCESDQVAAEDTGNSILSATQGIQMAYEIGQVAYYGNALLTGAA
QISAITTTATGTVASMTVVTAAGTTTTLSGAVATGAYATMASGATGASAIGAGLQAYATALLNPATIAVAVAVMVVMKLL
MGGGCDQGDIQTAMQNAAKDCHYVGSYCQKKWPLVGCVQKAKSYCCFNSKMARIIHEQGRPQLLPFQPNGAWGSAKHPNC
RGFTPEEFQALDFSRIDLSEYFADVQKDLATKIQGSQQTIMQNIQNRYQAAPK
>Mature_613_residues
MLVRVVCSLCYVTLLLSLSGAHQTALALVSCQDRISANTPHRYIDALALFTEYNGTTYAIAKSAVSGSQSLPDGYFNFEA
NISREYLTTGTDTASLKRMLALGRFGEARPVRIDSRQTLDFVLKRFGAYLGSADSPQSTYIDAWKEFGLTGFTALAGTGL
PFTNWGTGTPYGGQDPQAVVMGRDGIWTSGLDGVRSSQIVQFPGKLDCSYSYIDPTTLPPVSPPATETFGTIICAQDLNN
NGYAADPGEVATCVVTPQGQYCPVGSVECNLVNSAYVCPLGSQYVCMEYQGVMRCSSNSCFDQTTTEEEADDIDESMLRD
DGDRDALGQCLGQLYVFNGKASRCRPPGMKVGMINDCCESDQVAAEDTGNSILSATQGIQMAYEIGQVAYYGNALLTGAA
QISAITTTATGTVASMTVVTAAGTTTTLSGAVATGAYATMASGATGASAIGAGLQAYATALLNPATIAVAVAVMVVMKLL
MGGGCDQGDIQTAMQNAAKDCHYVGSYCQKKWPLVGCVQKAKSYCCFNSKMARIIHEQGRPQLLPFQPNGAWGSAKHPNC
RGFTPEEFQALDFSRIDLSEYFADVQKDLATKIQGSQQTIMQNIQNRYQAAPK

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 65179; Mature: 65179

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRVVCSLCYVTLLLSLSGAHQTALALVSCQDRISANTPHRYIDALALFTEYNGTTYAI
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEE
AKSAVSGSQSLPDGYFNFEANISREYLTTGTDTASLKRMLALGRFGEARPVRIDSRQTLD
EHHHHCCCCCCCCCCEEEECCCCHHHEECCCCHHHHHHHHHHHCCCCCCCEEECCHHHHH
FVLKRFGAYLGSADSPQSTYIDAWKEFGLTGFTALAGTGLPFTNWGTGTPYGGQDPQAVV
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
MGRDGIWTSGLDGVRSSQIVQFPGKLDCSYSYIDPTTLPPVSPPATETFGTIICAQDLNN
EECCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCHHHEEEEEEEECCC
NGYAADPGEVATCVVTPQGQYCPVGSVECNLVNSAYVCPLGSQYVCMEYQGVMRCSSNSC
CCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCEEECCCCCCEEEEECHHHHEECCCCC
FDQTTTEEEADDIDESMLRDDGDRDALGQCLGQLYVFNGKASRCRPPGMKVGMINDCCES
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCCEEECHHHHCCC
DQVAAEDTGNSILSATQGIQMAYEIGQVAYYGNALLTGAAQISAITTTATGTVASMTVVT
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCEECCHHHEEEEEECCCCHHEEEEEE
AAGTTTTLSGAVATGAYATMASGATGASAIGAGLQAYATALLNPATIAVAVAVMVVMKLL
ECCCCCCCCCHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MGGGCDQGDIQTAMQNAAKDCHYVGSYCQKKWPLVGCVQKAKSYCCFNSKMARIIHEQGR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQLLPFQPNGAWGSAKHPNCRGFTPEEFQALDFSRIDLSEYFADVQKDLATKIQGSQQTI
CCEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCHHHHHHHHHHHHHHHCCCCHHHH
MQNIQNRYQAAPK
HHHHHHHHCCCCC
>Mature Secondary Structure
MLVRVVCSLCYVTLLLSLSGAHQTALALVSCQDRISANTPHRYIDALALFTEYNGTTYAI
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEE
AKSAVSGSQSLPDGYFNFEANISREYLTTGTDTASLKRMLALGRFGEARPVRIDSRQTLD
EHHHHCCCCCCCCCCEEEECCCCHHHEECCCCHHHHHHHHHHHCCCCCCCEEECCHHHHH
FVLKRFGAYLGSADSPQSTYIDAWKEFGLTGFTALAGTGLPFTNWGTGTPYGGQDPQAVV
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
MGRDGIWTSGLDGVRSSQIVQFPGKLDCSYSYIDPTTLPPVSPPATETFGTIICAQDLNN
EECCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCHHHEEEEEEEECCC
NGYAADPGEVATCVVTPQGQYCPVGSVECNLVNSAYVCPLGSQYVCMEYQGVMRCSSNSC
CCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCEEECCCCCCEEEEECHHHHEECCCCC
FDQTTTEEEADDIDESMLRDDGDRDALGQCLGQLYVFNGKASRCRPPGMKVGMINDCCES
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCCEEECHHHHCCC
DQVAAEDTGNSILSATQGIQMAYEIGQVAYYGNALLTGAAQISAITTTATGTVASMTVVT
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCEECCHHHEEEEEECCCCHHEEEEEE
AAGTTTTLSGAVATGAYATMASGATGASAIGAGLQAYATALLNPATIAVAVAVMVVMKLL
ECCCCCCCCCHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MGGGCDQGDIQTAMQNAAKDCHYVGSYCQKKWPLVGCVQKAKSYCCFNSKMARIIHEQGR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQLLPFQPNGAWGSAKHPNCRGFTPEEFQALDFSRIDLSEYFADVQKDLATKIQGSQQTI
CCEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCHHHHHHHHHHHHHHHCCCCHHHH
MQNIQNRYQAAPK
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]