| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118578609
Identifier: 118578609
GI number: 118578609
Start: 173565
End: 174737
Strand: Reverse
Name: 118578609
Synonym: Ppro_0165
Alternate gene names: NA
Gene position: 174737-173565 (Counterclockwise)
Preceding gene: 118578610
Following gene: 118578608
Centisome position: 4.36
GC content: 55.41
Gene sequence:
>1173_bases ATGACTTCTGAATTCAACGATTGGCTTCACAGCAAAACCTGTCTCGATCTGCTGCTGTCGTGTGCCGATTATATCATCGG TAGGGCAAAGAAAAGCACCATCCAGCTCGATACCCTCTTCAGCGAGGAGACAGAGGATGACCATACCAAGCTTTCTCAGG TTGTAGCCAGCCATCTGTGGGAGTTTCTTAAGGACAAGAACGTTACTCTTGCCACTCTGGCAGCCGAACGAGTGGCGCAG GGCGACGTATCCGGCTTCATGACGCTTGTTGCCGACCGCTTCCTGGCCGAATGCCTGGACGAGCGGCGCACCGCCGCCAT CAATCCTGCCTATGCCTACTACCGCCATCTTCGCCACGTGATCTCGAAGGCGGAGGAGGTCAACTATCAGCCGACCCGGC GCGGGTCGTTCTACGCATTTTCCTTTGCCGACAGTTTGCAGCGCCTGCCAGAGGTGCACTGGAACCTCTCTTACACCGAC TGGCCCCGCCCTGCTGTCCCTGCCGCTCACATTCATGACAAACCGGGGATTATGCGGCTGTCTCGTAACTACTGGGACGA AGCGGTGGTACGGTTTCTCGACGAATATTTTCTGCCGATAAGGGAGCTGAACCGTTACGTGAGCGGTAATTATTCCCTTG GATGTGCAGTTACCACTGAGTCCCAATTGACGATGCCTGCCTGCGAGGATGGCAGCCAGCCGTTCTCTTTCGACGAGATA CTGGTGACTGACGCTCAAAATGATGTTCTCGGCAGCATGGGTAGGCAGCACCCACGCCTCGACTGCGACATTATTGAGAC CGAGCTTGAGGCCCTTGCTCACGACACTCTGTCGGAGCTGACCGAACGGCAAAGGACGATCCTGCTGCGCGTTGAGGATG GGGCGACGCTTGACGAGATCGCGCGGGAACTGGGGGAGAGAGGAGCAAGCAACATCCACTACCATCTGAAAAAGGCGTAT CAGACCATGAAGCGGAAGTGGAGTCTCTGGGGGCCGCCGACCCTGGCGCAATTTTCCGAGGTGGAGGAAGAGGAATTCTT CATCTTCTATGACAAAGTGATCGAGCTTTGTAAAATCTGCGGAGAGTGCCGTACTACTACAGAAAGGAGCCGTTTGCATG AATACCACAATCGACGATACGCAGTTGAAGCGGGCCTGGCAGACGGCTTTTGA
Upstream 100 bases:
>100_bases ACCTCGATGTTGATAACAACGTCGCCGGGAGGGAACACTACTTCGGCGTGGTCCCCGAGAGCGGCATCGTCGGCAATGCC CATTATGCATGGGAAAAGCC
Downstream 100 bases:
>100_bases ACTCCGCCTCTGTCCGGATGGCATCATACTCTTTGCGGAGACTCCGGACGAGAACCTGCACAGGCATTTGCAAATGTGCC ATATCTGCCGGGAAAAGCGG
Product: sigma-70, region 4 type 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTSEFNDWLHSKTCLDLLLSCADYIIGRAKKSTIQLDTLFSEETEDDHTKLSQVVASHLWEFLKDKNVTLATLAAERVAQ GDVSGFMTLVADRFLAECLDERRTAAINPAYAYYRHLRHVISKAEEVNYQPTRRGSFYAFSFADSLQRLPEVHWNLSYTD WPRPAVPAAHIHDKPGIMRLSRNYWDEAVVRFLDEYFLPIRELNRYVSGNYSLGCAVTTESQLTMPACEDGSQPFSFDEI LVTDAQNDVLGSMGRQHPRLDCDIIETELEALAHDTLSELTERQRTILLRVEDGATLDEIARELGERGASNIHYHLKKAY QTMKRKWSLWGPPTLAQFSEVEEEEFFIFYDKVIELCKICGECRTTTERSRLHEYHNRRYAVEAGLADGF
Sequences:
>Translated_390_residues MTSEFNDWLHSKTCLDLLLSCADYIIGRAKKSTIQLDTLFSEETEDDHTKLSQVVASHLWEFLKDKNVTLATLAAERVAQ GDVSGFMTLVADRFLAECLDERRTAAINPAYAYYRHLRHVISKAEEVNYQPTRRGSFYAFSFADSLQRLPEVHWNLSYTD WPRPAVPAAHIHDKPGIMRLSRNYWDEAVVRFLDEYFLPIRELNRYVSGNYSLGCAVTTESQLTMPACEDGSQPFSFDEI LVTDAQNDVLGSMGRQHPRLDCDIIETELEALAHDTLSELTERQRTILLRVEDGATLDEIARELGERGASNIHYHLKKAY QTMKRKWSLWGPPTLAQFSEVEEEEFFIFYDKVIELCKICGECRTTTERSRLHEYHNRRYAVEAGLADGF >Mature_389_residues TSEFNDWLHSKTCLDLLLSCADYIIGRAKKSTIQLDTLFSEETEDDHTKLSQVVASHLWEFLKDKNVTLATLAAERVAQG DVSGFMTLVADRFLAECLDERRTAAINPAYAYYRHLRHVISKAEEVNYQPTRRGSFYAFSFADSLQRLPEVHWNLSYTDW PRPAVPAAHIHDKPGIMRLSRNYWDEAVVRFLDEYFLPIRELNRYVSGNYSLGCAVTTESQLTMPACEDGSQPFSFDEIL VTDAQNDVLGSMGRQHPRLDCDIIETELEALAHDTLSELTERQRTILLRVEDGATLDEIARELGERGASNIHYHLKKAYQ TMKRKWSLWGPPTLAQFSEVEEEEFFIFYDKVIELCKICGECRTTTERSRLHEYHNRRYAVEAGLADGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44870; Mature: 44739
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEFNDWLHSKTCLDLLLSCADYIIGRAKKSTIQLDTLFSEETEDDHTKLSQVVASHLW CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHH EFLKDKNVTLATLAAERVAQGDVSGFMTLVADRFLAECLDERRTAAINPAYAYYRHLRHV HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ISKAEEVNYQPTRRGSFYAFSFADSLQRLPEVHWNLSYTDWPRPAVPAAHIHDKPGIMRL HHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH SRNYWDEAVVRFLDEYFLPIRELNRYVSGNYSLGCAVTTESQLTMPACEDGSQPFSFDEI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCE LVTDAQNDVLGSMGRQHPRLDCDIIETELEALAHDTLSELTERQRTILLRVEDGATLDEI EEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHH ARELGERGASNIHYHLKKAYQTMKRKWSLWGPPTLAQFSEVEEEEFFIFYDKVIELCKIC HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHEEHHHHHHHHHHHH GECRTTTERSRLHEYHNRRYAVEAGLADGF HHHCCHHHHHHHHHHHCCEEEEECCCCCCC >Mature Secondary Structure TSEFNDWLHSKTCLDLLLSCADYIIGRAKKSTIQLDTLFSEETEDDHTKLSQVVASHLW CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHH EFLKDKNVTLATLAAERVAQGDVSGFMTLVADRFLAECLDERRTAAINPAYAYYRHLRHV HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ISKAEEVNYQPTRRGSFYAFSFADSLQRLPEVHWNLSYTDWPRPAVPAAHIHDKPGIMRL HHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH SRNYWDEAVVRFLDEYFLPIRELNRYVSGNYSLGCAVTTESQLTMPACEDGSQPFSFDEI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCE LVTDAQNDVLGSMGRQHPRLDCDIIETELEALAHDTLSELTERQRTILLRVEDGATLDEI EEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHH ARELGERGASNIHYHLKKAYQTMKRKWSLWGPPTLAQFSEVEEEEFFIFYDKVIELCKIC HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHEEHHHHHHHHHHHH GECRTTTERSRLHEYHNRRYAVEAGLADGF HHHCCHHHHHHHHHHHCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA