| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118578607
Identifier: 118578607
GI number: 118578607
Start: 169852
End: 172491
Strand: Reverse
Name: 118578607
Synonym: Ppro_0163
Alternate gene names: NA
Gene position: 172491-169852 (Counterclockwise)
Preceding gene: 118578608
Following gene: 118578606
Centisome position: 4.3
GC content: 45.34
Gene sequence:
>2640_bases ATGCATGATCCCCAGTGGACCCTTGAAGGCGCCTGCGACAAGATTGACAAGATTGACAATTGGCTTTTTGAGCGCAAAGC GGCAACACAGTGGCTTCCTTTCCCTCATCCAGGGATCTGGCCAACGGATCAATCACGTTTTCCACAAGTCGCAAAACTCC TCACAGAGTACCTCCCCGCCAATCTCTGGCTCTTTTTCTATCAAACTCTTGCGGCCAGTTTTCTTCTCGCGCCGGAAAAG GCTCCGGAATCCTTTTCTAATTGGCTGGATTCTTCTGTCGACTGGGAGGAAGTTGCAGGAGCAGGGAGCTCGTTAGAGCG AATGCAGCGATGGCAGTGGTTAGTTGTACCCATGGCGCTGGCAGGAGATACCATGCAGACCGTACGCATGCTTCTTGTTG GCTACCATGATGAGGATTGCGCGCGAACTTTTCCCGCATGGGCTGACGGCCGTCTTGATGCGCAAGCAAAAGGGGCAATT CACACAGCATCACAGTTGGCGATACAACGATTTCCAGACAGCAAACATTTTTTCTACTGGCCCCTTCTGGATCGTTCCGA CTCAACCTACACTGTCAACGGGTCATCGGCCGCCCTCTCCGCTTATCTTGGAAGCGTGTCTCTATTGGAATCGATACTGC CGCCTAATATCCTTATCACCGGAAATGTAGCCGCTGACGCCACCCTTTGCGAAGCGGGATACTTGGTAGAAAAGCTGAAG GTAGCCGAAGAAAAACGATATAGCGCCCTCATGTACCCTGCTCTTTCGGCTGTCGATCCGCTGGCCGACAGAGATGCAAC GAGAATAAATAGAATTCCCGTGCGCACGCTACGTGAAGCGGAGATAATTTGGTTCCACCATAGTACCGGCTGCGCCCAGG AAATTGTCGACTTCGAGCGCCTGTTTGAAGATCCCCCCCGGTTGCTGGAAGCCATTCCGGACCAGGAAGGTGCTTTGCTG ACCATAGTCGAAGCGGAGCGGGAACGTATCACAACGGTTCTGGCACCGCTCCTTTCATCGGGTACGAAACGAGCGCTCGA TGCGCTTGAAATTTTCATCAGAAAAATCGAAGTGCACCTTAACGCCCCAAATTGGAACCGGCGAAATGCAGAGATATCCC TTTTACTCTTTGATCTAGCACTGGTAGAAACGCTATTGCAGCATGACGCAGAGCTTGCCTTCCGAATATCTCTTTTGCAT GTCAAGCTAGCTAATCACAGTAGAGAAACAGAGAACCAGCAGAAATGGTATGATCTGGCCTCGCGCAGCTATTGTCAGAT TCGTACTCATGATGCGGAGGACAACAAGCGGAAATTCCGTGGAAATAAATTTGTCGGAGATATCCTTGCTGACAATGTTT ACAGGTTCATAAGCAACAAAGGAAGGGTTCTGGGAACATCGTTCCTGCTCTCCGCATTCCTCGCTACAATCATCTTCATA AAAATAAATTACGAGCCATATTATCTTACTAAAGGAATTGAATACGAAATTGAAGCAAAGACGCTTTGTAAGATCTTGCG AGACATTTCAAATCCGCTCACACCTGCAAACAGTCAATCTAAAGCGATCATGAATGCCATCAACAGAATCATTTCCCATT CTTCGTCCTATGTTGTAATTTCAGTTGGTAATCAATTTGAATTTGATAATGGGAAAAAAGATTCACTCGACATTAGTCGA TCCACCGTAACATATCAAGATTCATTCACAAGCAGTATCGGATTTCTCAATATACGTACATGGAAAAGCAATAAGCCGAA ACTTAGAGACCATCTCATACGTGCATGGACCTGGTCGGCAATAGATTTCATGAAGGACTATAAAGGATGGTTATCCCACA ATCTTTACCAGCGTTCTGAATTTCTCTATAAGGGTCTAGCGATTATATGGGTATCCATGATTTTTATGTTTTCACTCCTC AAATCTAAACATGAGGAAAGCCACTTTCTGAAATCACAACTAGAAAAAGAGGGATATTGCCTGCGTTATGAGTATGATAC TTTAAATAAGGAAGTTGAAGAGATGCTAGCGGGTGGTGGCAATTGCGATAGCGACATCATAATTGGTATGAGACAGAAAT TGGAGGATTTGAAAGTCGCACTAATTGACCTTAATGTGAAGACGAATAAAAACATTCTCGATGCGAAAATTGAGTATTTT GAGCCCAATCATGCCTACACCATCGACGAAATTAGACAAAAGTTGTGTATTAGCACAATCACAAATAACAGTGACATAAG TGTAATTAGCTACTTTGACAGGTGTTTTCAGCAGAAAAGCCATGTCAGGTTCTTCATAGAACTCCTTGACCTCAATATAG TTAACGCAAATCACCTTAACACAATTAATGTTTCCGTGCCGATATCAAGAGGTCAAGACAGGGAAAAGATGGAACAGGAG ATCAGGAATAGATTTGAGCGGTATCTATCTGCCACTCTCTTCGATAAACTCAAGATCGACGTCCACTACATCAGCGATAA AGGGTACCTTCATATGCGAGCCATGGACATAATCGGTGGCAGCGCCAAGTTGACCTTGAAACTTGAAAAAGGGATGGACT TTCTCGAACCAAACATGTCAGACAAGAGCAAATATTCGTCGCCAACAAGGACATATGTTGTGGTTGTATATAGCTGCTAG
Upstream 100 bases:
>100_bases AGCACCTTAACCCCTGAAACGATCGACTTCGACATCTTCTTTAAAGGTGTCTCAAGGGCTGAAACCGTTTCTGGTCATCT GCAACTACTGGTTGTAAGCT
Downstream 100 bases:
>100_bases CGTCCATTAGGGGGATTATGGGTAGAGTGGGCGAGCCAAGGGGGCAGATTTGCTAAAAGGTGTGGCATCGCCGCCTCCGA GCTAGAAAGGGGGTGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 879; Mature: 879
Protein sequence:
>879_residues MHDPQWTLEGACDKIDKIDNWLFERKAATQWLPFPHPGIWPTDQSRFPQVAKLLTEYLPANLWLFFYQTLAASFLLAPEK APESFSNWLDSSVDWEEVAGAGSSLERMQRWQWLVVPMALAGDTMQTVRMLLVGYHDEDCARTFPAWADGRLDAQAKGAI HTASQLAIQRFPDSKHFFYWPLLDRSDSTYTVNGSSAALSAYLGSVSLLESILPPNILITGNVAADATLCEAGYLVEKLK VAEEKRYSALMYPALSAVDPLADRDATRINRIPVRTLREAEIIWFHHSTGCAQEIVDFERLFEDPPRLLEAIPDQEGALL TIVEAERERITTVLAPLLSSGTKRALDALEIFIRKIEVHLNAPNWNRRNAEISLLLFDLALVETLLQHDAELAFRISLLH VKLANHSRETENQQKWYDLASRSYCQIRTHDAEDNKRKFRGNKFVGDILADNVYRFISNKGRVLGTSFLLSAFLATIIFI KINYEPYYLTKGIEYEIEAKTLCKILRDISNPLTPANSQSKAIMNAINRIISHSSSYVVISVGNQFEFDNGKKDSLDISR STVTYQDSFTSSIGFLNIRTWKSNKPKLRDHLIRAWTWSAIDFMKDYKGWLSHNLYQRSEFLYKGLAIIWVSMIFMFSLL KSKHEESHFLKSQLEKEGYCLRYEYDTLNKEVEEMLAGGGNCDSDIIIGMRQKLEDLKVALIDLNVKTNKNILDAKIEYF EPNHAYTIDEIRQKLCISTITNNSDISVISYFDRCFQQKSHVRFFIELLDLNIVNANHLNTINVSVPISRGQDREKMEQE IRNRFERYLSATLFDKLKIDVHYISDKGYLHMRAMDIIGGSAKLTLKLEKGMDFLEPNMSDKSKYSSPTRTYVVVVYSC
Sequences:
>Translated_879_residues MHDPQWTLEGACDKIDKIDNWLFERKAATQWLPFPHPGIWPTDQSRFPQVAKLLTEYLPANLWLFFYQTLAASFLLAPEK APESFSNWLDSSVDWEEVAGAGSSLERMQRWQWLVVPMALAGDTMQTVRMLLVGYHDEDCARTFPAWADGRLDAQAKGAI HTASQLAIQRFPDSKHFFYWPLLDRSDSTYTVNGSSAALSAYLGSVSLLESILPPNILITGNVAADATLCEAGYLVEKLK VAEEKRYSALMYPALSAVDPLADRDATRINRIPVRTLREAEIIWFHHSTGCAQEIVDFERLFEDPPRLLEAIPDQEGALL TIVEAERERITTVLAPLLSSGTKRALDALEIFIRKIEVHLNAPNWNRRNAEISLLLFDLALVETLLQHDAELAFRISLLH VKLANHSRETENQQKWYDLASRSYCQIRTHDAEDNKRKFRGNKFVGDILADNVYRFISNKGRVLGTSFLLSAFLATIIFI KINYEPYYLTKGIEYEIEAKTLCKILRDISNPLTPANSQSKAIMNAINRIISHSSSYVVISVGNQFEFDNGKKDSLDISR STVTYQDSFTSSIGFLNIRTWKSNKPKLRDHLIRAWTWSAIDFMKDYKGWLSHNLYQRSEFLYKGLAIIWVSMIFMFSLL KSKHEESHFLKSQLEKEGYCLRYEYDTLNKEVEEMLAGGGNCDSDIIIGMRQKLEDLKVALIDLNVKTNKNILDAKIEYF EPNHAYTIDEIRQKLCISTITNNSDISVISYFDRCFQQKSHVRFFIELLDLNIVNANHLNTINVSVPISRGQDREKMEQE IRNRFERYLSATLFDKLKIDVHYISDKGYLHMRAMDIIGGSAKLTLKLEKGMDFLEPNMSDKSKYSSPTRTYVVVVYSC >Mature_879_residues MHDPQWTLEGACDKIDKIDNWLFERKAATQWLPFPHPGIWPTDQSRFPQVAKLLTEYLPANLWLFFYQTLAASFLLAPEK APESFSNWLDSSVDWEEVAGAGSSLERMQRWQWLVVPMALAGDTMQTVRMLLVGYHDEDCARTFPAWADGRLDAQAKGAI HTASQLAIQRFPDSKHFFYWPLLDRSDSTYTVNGSSAALSAYLGSVSLLESILPPNILITGNVAADATLCEAGYLVEKLK VAEEKRYSALMYPALSAVDPLADRDATRINRIPVRTLREAEIIWFHHSTGCAQEIVDFERLFEDPPRLLEAIPDQEGALL TIVEAERERITTVLAPLLSSGTKRALDALEIFIRKIEVHLNAPNWNRRNAEISLLLFDLALVETLLQHDAELAFRISLLH VKLANHSRETENQQKWYDLASRSYCQIRTHDAEDNKRKFRGNKFVGDILADNVYRFISNKGRVLGTSFLLSAFLATIIFI KINYEPYYLTKGIEYEIEAKTLCKILRDISNPLTPANSQSKAIMNAINRIISHSSSYVVISVGNQFEFDNGKKDSLDISR STVTYQDSFTSSIGFLNIRTWKSNKPKLRDHLIRAWTWSAIDFMKDYKGWLSHNLYQRSEFLYKGLAIIWVSMIFMFSLL KSKHEESHFLKSQLEKEGYCLRYEYDTLNKEVEEMLAGGGNCDSDIIIGMRQKLEDLKVALIDLNVKTNKNILDAKIEYF EPNHAYTIDEIRQKLCISTITNNSDISVISYFDRCFQQKSHVRFFIELLDLNIVNANHLNTINVSVPISRGQDREKMEQE IRNRFERYLSATLFDKLKIDVHYISDKGYLHMRAMDIIGGSAKLTLKLEKGMDFLEPNMSDKSKYSSPTRTYVVVVYSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100774; Mature: 100774
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDPQWTLEGACDKIDKIDNWLFERKAATQWLPFPHPGIWPTDQSRFPQVAKLLTEYLPA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCH NLWLFFYQTLAASFLLAPEKAPESFSNWLDSSVDWEEVAGAGSSLERMQRWQWLVVPMAL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCEEEEEEHHH AGDTMQTVRMLLVGYHDEDCARTFPAWADGRLDAQAKGAIHTASQLAIQRFPDSKHFFYW CCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE PLLDRSDSTYTVNGSSAALSAYLGSVSLLESILPPNILITGNVAADATLCEAGYLVEKLK EEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH VAEEKRYSALMYPALSAVDPLADRDATRINRIPVRTLREAEIIWFHHSTGCAQEIVDFER HHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHCCCEEEEEEECCCCHHHHHHHHHH LFEDPPRLLEAIPDQEGALLTIVEAERERITTVLAPLLSSGTKRALDALEIFIRKIEVHL HHCCCHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEE NAPNWNRRNAEISLLLFDLALVETLLQHDAELAFRISLLHVKLANHSRETENQQKWYDLA CCCCCCCCCCEEEEHHHHHHHHHHHHHCCCHHEEEEEEEEEEECCCCCCCCHHHHHHHHH SRSYCQIRTHDAEDNKRKFRGNKFVGDILADNVYRFISNKGRVLGTSFLLSAFLATIIFI CCCEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHEEE KINYEPYYLTKGIEYEIEAKTLCKILRDISNPLTPANSQSKAIMNAINRIISHSSSYVVI EECCCCEEEECCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE SVGNQFEFDNGKKDSLDISRSTVTYQDSFTSSIGFLNIRTWKSNKPKLRDHLIRAWTWSA EECCEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH IDFMKDYKGWLSHNLYQRSEFLYKGLAIIWVSMIFMFSLLKSKHEESHFLKSQLEKEGYC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCE LRYEYDTLNKEVEEMLAGGGNCDSDIIIGMRQKLEDLKVALIDLNVKTNKNILDAKIEYF EEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEEEEEEECCCCCEEECEEEEE EPNHAYTIDEIRQKLCISTITNNSDISVISYFDRCFQQKSHVRFFIELLDLNIVNANHLN CCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCEEECCCCCE TINVSVPISRGQDREKMEQEIRNRFERYLSATLFDKLKIDVHYISDKGYLHMRAMDIIGG EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEEEECCC SAKLTLKLEKGMDFLEPNMSDKSKYSSPTRTYVVVVYSC CEEEEEEECCCCHHHCCCCCCHHHCCCCCEEEEEEEEEC >Mature Secondary Structure MHDPQWTLEGACDKIDKIDNWLFERKAATQWLPFPHPGIWPTDQSRFPQVAKLLTEYLPA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCH NLWLFFYQTLAASFLLAPEKAPESFSNWLDSSVDWEEVAGAGSSLERMQRWQWLVVPMAL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCEEEEEEHHH AGDTMQTVRMLLVGYHDEDCARTFPAWADGRLDAQAKGAIHTASQLAIQRFPDSKHFFYW CCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE PLLDRSDSTYTVNGSSAALSAYLGSVSLLESILPPNILITGNVAADATLCEAGYLVEKLK EEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH VAEEKRYSALMYPALSAVDPLADRDATRINRIPVRTLREAEIIWFHHSTGCAQEIVDFER HHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHCCCEEEEEEECCCCHHHHHHHHHH LFEDPPRLLEAIPDQEGALLTIVEAERERITTVLAPLLSSGTKRALDALEIFIRKIEVHL HHCCCHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEE NAPNWNRRNAEISLLLFDLALVETLLQHDAELAFRISLLHVKLANHSRETENQQKWYDLA CCCCCCCCCCEEEEHHHHHHHHHHHHHCCCHHEEEEEEEEEEECCCCCCCCHHHHHHHHH SRSYCQIRTHDAEDNKRKFRGNKFVGDILADNVYRFISNKGRVLGTSFLLSAFLATIIFI CCCEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHEEE KINYEPYYLTKGIEYEIEAKTLCKILRDISNPLTPANSQSKAIMNAINRIISHSSSYVVI EECCCCEEEECCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE SVGNQFEFDNGKKDSLDISRSTVTYQDSFTSSIGFLNIRTWKSNKPKLRDHLIRAWTWSA EECCEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH IDFMKDYKGWLSHNLYQRSEFLYKGLAIIWVSMIFMFSLLKSKHEESHFLKSQLEKEGYC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCE LRYEYDTLNKEVEEMLAGGGNCDSDIIIGMRQKLEDLKVALIDLNVKTNKNILDAKIEYF EEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEEEEEEECCCCCEEECEEEEE EPNHAYTIDEIRQKLCISTITNNSDISVISYFDRCFQQKSHVRFFIELLDLNIVNANHLN CCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCEEECCCCCE TINVSVPISRGQDREKMEQEIRNRFERYLSATLFDKLKIDVHYISDKGYLHMRAMDIIGG EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEEEECCC SAKLTLKLEKGMDFLEPNMSDKSKYSSPTRTYVVVVYSC CEEEEEEECCCCHHHCCCCCCHHHCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA