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The map label for this gene is bphB [H]

Identifier: 118578539

GI number: 118578539

Start: 106413

End: 108977

Strand: Direct

Name: bphB [H]

Synonym: Ppro_0091

Alternate gene names: 118578539

Gene position: 106413-108977 (Clockwise)

Preceding gene: 118578538

Following gene: 118578540

Centisome position: 2.66

GC content: 63.63

Gene sequence:

>2565_bases
ATGAACTGGCGACCGCGGAAGCGGAACTCCCTTGGTTCGTACCTGCTGCTGGCTGCCCTGATCTGCGCCGGCTTTGCCGG
CAACTTCTTTGCGCCCCCCCTGTATCTCGGGTTCGGCTACCTGTTCGGCAGCATCTTCGTCCTGATGGTCCTGCGGCTGT
TCGGGATCGGCTGGGGAGTGCTGGCCGGCCTGGTGGCCTCCTCGGCCACCATCCACACTTTCGGTCATCCCTATGCCATG
GCCTGGCTTTGCGCCGAGCCGCTCTTCGTGGGCTGGCTGCTGGTTAAGGGCAGGACGCGCAACATCATCCTCTTTGATGC
CGTGTACTGGCCCCTGGTGGGTGCGCCGCTGATCTGGTTCTTCTTCCGCTTTGTCATGCAGGTTGACGCAGCGGTCAGCC
TGGCGGCCATGCTGCTGTTCTGGATAACCGGCATCACCAACGCCCTGCTGGCCAGCCTCCTGCAGACCCATCTGCCCAGC
CTGGCACGGTTCGCCGTTCCGGAGTCGCGCCATCTGGTGCCGATCCATCAGCTGATATTCAACGTCCTGATGGCGGCGGT
GCTGATCCCGGCCGTTGTCATACTGGTCATCCATGGCCGCAGCGTGGAGAGCAGCGCCCTGCGTGACCTGGAGTGCGATC
TTGAGAAGAGCCTGCGGGCAGGCGTCCACGGGGTGGGGTTGAGGCTCCATGGCCAGGGGGCAAGCGCGGAGGAACTCAGG
CGGATTCTTTTGGCCGCGCGCCACAAGCCGTTCAACCGGCTGACCCTGGTTGACGGGGAGGGGAGGGTCATCGTTGCCAC
GGACGACGGCGGGCCCGGGCGCGGGGAACTCTTCAGGGGCTGTCCGGAGGATGTGCCGAGCAGCGGGGGAAATGGCGGCC
TTGCACACTGCACGGATGAGGTCTCTTCCGCGCAGCTGCCCGGAGAGCGCCATCGTTCCACCATCTTCAGCATTTCCATG
GAGGTGGGACAGGGCAGCCGCCGGCGCATGATCGCCGAGACATCCTTTGCGCCCTACCAGCCGCTGCTGGTCAGCCAGTG
CACCGGGGCGCTGGCGCTGGCACTGGGACTGAACATGCTGGCCCTGGCCATAGCCATGTACACGTCGCGCCGCCTGGCTG
CTCCGCTGATGCACCTGTCCCGCATCACCACCGACCTGCCCGAGCGAATCCTGGATGGCACGGACGCTCCCCTGCCGGAG
AGTACGGTGGCGGAGATCGACCGTCTGAGCAGCAATTTCAGGGCAATGTCCAATGCCCTGGCCGACAGGTTTCAGGAGAT
CACCCTCTACAGCGAAACCCTGGAAACGCGGGTCAGGGAGCGCACCAGGGAACTCATCCGCGCCAATGACAAGCTGGAGC
GGGAGAACGTAGAGCGGACCCAGACCGAGCAGCAGCGCGACCAGCTCCTGGATGAGCTGGTCAACCAGCTCCGCTTCCTG
CAGAAGATCATCGATGCCATACCCAATCCGATCTTCTACCGGGACCTGAATGGCGTGTATCAGGGGTGCAACCGTGCCTT
CGAGGAGAACTGGGGCCTCTCCCGCGAGGAGATCGTGGGCAAGACCGTCCGGGACCTGTTTCCCGAGGAGACCGTCCGCA
TGCTCCAGTCGTCGGACCGTGACAGCCTGGGCAAGCTCGGCGCCGAGGTCATCGAGTCACAGCTCTGCTATGCCGATGGC
AAGAACCATGAGGTGATCATCTACACGTCGACCTACGACGATACCAAAGGCAATCCGGCGGGTGTGGTGGGAAGCGTGGT
GGACATCACCCTGCGCAAGAACGCCGAGGCCGAGCGGGATCGGCTGGTGGTAGAGTTGCAGCAGAAGAACAAGGAGCTGG
AGGGAATCGTCTATGTGGCCTCCCACGACCTGCGCTCCCCGCTGGTGAACATCCAGGGTTTCAGCCGCAAGCTGCTCAAA
AGCTGCGGGGAGCTGGAATCCCTGCTGGCGGGGGAGATGGATGACGAGCAGCGCCGGCGCCTGGAGTGGATCCTTAAGGA
GAGCATTCCCAAGTCGCTGGGCTTTGTCACCGGCAGTGTGGAGAAGATGGATGCGATTCTCAAGGGGCTCTTGCGCCTCT
CCCGCCTGGGACGGGCGGCGCTCTGTTTCGACACCCTTGACATGCAGTCGATTATGGAGAAAATAGCTGACTCAATGGCC
TATCAGATCGATACGGCCGGGGCGCGCGTGGAGATCCAACGGCTCGGACCCTGCGTGGCGGATGCCGGCCAGATCTCCCA
GGTATTCAGCAACCTGCTGGACAATGCCATCAAATACCGTTCGCCGGACCGCCCGCTTCACGTGCGCATCTCCAGCCAAG
AGTTTGAGGAGGGGATACGCTACTGCGTTGAGGACAACGGCATCGGTATCCCCCGCGACCAGCAGGAGGCGATCTGGGAG
ATCTTCCACCGCCTGGACCCCGATTCCTGCCAGGGTGAGGGGTTGGGGCTGACCCTGGCCCGGCGGATCGTCGCCCGCCT
GGGAGGCTCCATCTGGGTGGAGTCCACGGAGGGGGAGGGCTCCTGTTTTTACGTGGTGCTGCGGAAACCGGCGCAGCAGG
TGTGA

Upstream 100 bases:

>100_bases
ATAGCCGCGCCATGGCCTGTTGCCTGACCCGCCCCATAGCAGACGTTGCCCGCACCTGTTCAGCCTCTTGCACGCCCCCG
GCATTGGCGGGCGACAGACC

Downstream 100 bases:

>100_bases
TGCCCCGGTTCCGGGGCTTTGGTTGTCGACGTGCCGCCAGGGATCAGCTATCGCTCTGTCAGGGAGGTTTCACATGGGTT
TCGGTAACAGGAAAGCGGTC

Product: multi-sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 854; Mature: 854

Protein sequence:

>854_residues
MNWRPRKRNSLGSYLLLAALICAGFAGNFFAPPLYLGFGYLFGSIFVLMVLRLFGIGWGVLAGLVASSATIHTFGHPYAM
AWLCAEPLFVGWLLVKGRTRNIILFDAVYWPLVGAPLIWFFFRFVMQVDAAVSLAAMLLFWITGITNALLASLLQTHLPS
LARFAVPESRHLVPIHQLIFNVLMAAVLIPAVVILVIHGRSVESSALRDLECDLEKSLRAGVHGVGLRLHGQGASAEELR
RILLAARHKPFNRLTLVDGEGRVIVATDDGGPGRGELFRGCPEDVPSSGGNGGLAHCTDEVSSAQLPGERHRSTIFSISM
EVGQGSRRRMIAETSFAPYQPLLVSQCTGALALALGLNMLALAIAMYTSRRLAAPLMHLSRITTDLPERILDGTDAPLPE
STVAEIDRLSSNFRAMSNALADRFQEITLYSETLETRVRERTRELIRANDKLERENVERTQTEQQRDQLLDELVNQLRFL
QKIIDAIPNPIFYRDLNGVYQGCNRAFEENWGLSREEIVGKTVRDLFPEETVRMLQSSDRDSLGKLGAEVIESQLCYADG
KNHEVIIYTSTYDDTKGNPAGVVGSVVDITLRKNAEAERDRLVVELQQKNKELEGIVYVASHDLRSPLVNIQGFSRKLLK
SCGELESLLAGEMDDEQRRRLEWILKESIPKSLGFVTGSVEKMDAILKGLLRLSRLGRAALCFDTLDMQSIMEKIADSMA
YQIDTAGARVEIQRLGPCVADAGQISQVFSNLLDNAIKYRSPDRPLHVRISSQEFEEGIRYCVEDNGIGIPRDQQEAIWE
IFHRLDPDSCQGEGLGLTLARRIVARLGGSIWVESTEGEGSCFYVVLRKPAQQV

Sequences:

>Translated_854_residues
MNWRPRKRNSLGSYLLLAALICAGFAGNFFAPPLYLGFGYLFGSIFVLMVLRLFGIGWGVLAGLVASSATIHTFGHPYAM
AWLCAEPLFVGWLLVKGRTRNIILFDAVYWPLVGAPLIWFFFRFVMQVDAAVSLAAMLLFWITGITNALLASLLQTHLPS
LARFAVPESRHLVPIHQLIFNVLMAAVLIPAVVILVIHGRSVESSALRDLECDLEKSLRAGVHGVGLRLHGQGASAEELR
RILLAARHKPFNRLTLVDGEGRVIVATDDGGPGRGELFRGCPEDVPSSGGNGGLAHCTDEVSSAQLPGERHRSTIFSISM
EVGQGSRRRMIAETSFAPYQPLLVSQCTGALALALGLNMLALAIAMYTSRRLAAPLMHLSRITTDLPERILDGTDAPLPE
STVAEIDRLSSNFRAMSNALADRFQEITLYSETLETRVRERTRELIRANDKLERENVERTQTEQQRDQLLDELVNQLRFL
QKIIDAIPNPIFYRDLNGVYQGCNRAFEENWGLSREEIVGKTVRDLFPEETVRMLQSSDRDSLGKLGAEVIESQLCYADG
KNHEVIIYTSTYDDTKGNPAGVVGSVVDITLRKNAEAERDRLVVELQQKNKELEGIVYVASHDLRSPLVNIQGFSRKLLK
SCGELESLLAGEMDDEQRRRLEWILKESIPKSLGFVTGSVEKMDAILKGLLRLSRLGRAALCFDTLDMQSIMEKIADSMA
YQIDTAGARVEIQRLGPCVADAGQISQVFSNLLDNAIKYRSPDRPLHVRISSQEFEEGIRYCVEDNGIGIPRDQQEAIWE
IFHRLDPDSCQGEGLGLTLARRIVARLGGSIWVESTEGEGSCFYVVLRKPAQQV
>Mature_854_residues
MNWRPRKRNSLGSYLLLAALICAGFAGNFFAPPLYLGFGYLFGSIFVLMVLRLFGIGWGVLAGLVASSATIHTFGHPYAM
AWLCAEPLFVGWLLVKGRTRNIILFDAVYWPLVGAPLIWFFFRFVMQVDAAVSLAAMLLFWITGITNALLASLLQTHLPS
LARFAVPESRHLVPIHQLIFNVLMAAVLIPAVVILVIHGRSVESSALRDLECDLEKSLRAGVHGVGLRLHGQGASAEELR
RILLAARHKPFNRLTLVDGEGRVIVATDDGGPGRGELFRGCPEDVPSSGGNGGLAHCTDEVSSAQLPGERHRSTIFSISM
EVGQGSRRRMIAETSFAPYQPLLVSQCTGALALALGLNMLALAIAMYTSRRLAAPLMHLSRITTDLPERILDGTDAPLPE
STVAEIDRLSSNFRAMSNALADRFQEITLYSETLETRVRERTRELIRANDKLERENVERTQTEQQRDQLLDELVNQLRFL
QKIIDAIPNPIFYRDLNGVYQGCNRAFEENWGLSREEIVGKTVRDLFPEETVRMLQSSDRDSLGKLGAEVIESQLCYADG
KNHEVIIYTSTYDDTKGNPAGVVGSVVDITLRKNAEAERDRLVVELQQKNKELEGIVYVASHDLRSPLVNIQGFSRKLLK
SCGELESLLAGEMDDEQRRRLEWILKESIPKSLGFVTGSVEKMDAILKGLLRLSRLGRAALCFDTLDMQSIMEKIADSMA
YQIDTAGARVEIQRLGPCVADAGQISQVFSNLLDNAIKYRSPDRPLHVRISSQEFEEGIRYCVEDNGIGIPRDQQEAIWE
IFHRLDPDSCQGEGLGLTLARRIVARLGGSIWVESTEGEGSCFYVVLRKPAQQV

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=429, Percent_Identity=27.972027972028, Blast_Score=139, Evalue=6e-34,
Organism=Escherichia coli, GI1788549, Length=379, Percent_Identity=25.5936675461741, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786600, Length=255, Percent_Identity=27.0588235294118, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789149, Length=236, Percent_Identity=25, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1790436, Length=263, Percent_Identity=27.3764258555133, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1790861, Length=276, Percent_Identity=25.7246376811594, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 94788; Mature: 94788

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWRPRKRNSLGSYLLLAALICAGFAGNFFAPPLYLGFGYLFGSIFVLMVLRLFGIGWGV
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LAGLVASSATIHTFGHPYAMAWLCAEPLFVGWLLVKGRTRNIILFDAVYWPLVGAPLIWF
HHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH
FFRFVMQVDAAVSLAAMLLFWITGITNALLASLLQTHLPSLARFAVPESRHLVPIHQLIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
NVLMAAVLIPAVVILVIHGRSVESSALRDLECDLEKSLRAGVHGVGLRLHGQGASAEELR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHH
RILLAARHKPFNRLTLVDGEGRVIVATDDGGPGRGELFRGCPEDVPSSGGNGGLAHCTDE
HHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHH
VSSAQLPGERHRSTIFSISMEVGQGSRRRMIAETSFAPYQPLLVSQCTGALALALGLNML
HHHCCCCCHHHHHHHEEEEEHHCCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
ALAIAMYTSRRLAAPLMHLSRITTDLPERILDGTDAPLPESTVAEIDRLSSNFRAMSNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ADRFQEITLYSETLETRVRERTRELIRANDKLERENVERTQTEQQRDQLLDELVNQLRFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKIIDAIPNPIFYRDLNGVYQGCNRAFEENWGLSREEIVGKTVRDLFPEETVRMLQSSDR
HHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCH
DSLGKLGAEVIESQLCYADGKNHEVIIYTSTYDDTKGNPAGVVGSVVDITLRKNAEAERD
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHEEEECCCCCHHHH
RLVVELQQKNKELEGIVYVASHDLRSPLVNIQGFSRKLLKSCGELESLLAGEMDDEQRRR
HHHHHHHHCCCCCCEEEEEECCHHHCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LEWILKESIPKSLGFVTGSVEKMDAILKGLLRLSRLGRAALCFDTLDMQSIMEKIADSMA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YQIDTAGARVEIQRLGPCVADAGQISQVFSNLLDNAIKYRSPDRPLHVRISSQEFEEGIR
HHEECCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHH
YCVEDNGIGIPRDQQEAIWEIFHRLDPDSCQGEGLGLTLARRIVARLGGSIWVESTEGEG
HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC
SCFYVVLRKPAQQV
CEEEEEECCCCCCC
>Mature Secondary Structure
MNWRPRKRNSLGSYLLLAALICAGFAGNFFAPPLYLGFGYLFGSIFVLMVLRLFGIGWGV
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LAGLVASSATIHTFGHPYAMAWLCAEPLFVGWLLVKGRTRNIILFDAVYWPLVGAPLIWF
HHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH
FFRFVMQVDAAVSLAAMLLFWITGITNALLASLLQTHLPSLARFAVPESRHLVPIHQLIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
NVLMAAVLIPAVVILVIHGRSVESSALRDLECDLEKSLRAGVHGVGLRLHGQGASAEELR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHH
RILLAARHKPFNRLTLVDGEGRVIVATDDGGPGRGELFRGCPEDVPSSGGNGGLAHCTDE
HHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHH
VSSAQLPGERHRSTIFSISMEVGQGSRRRMIAETSFAPYQPLLVSQCTGALALALGLNML
HHHCCCCCHHHHHHHEEEEEHHCCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
ALAIAMYTSRRLAAPLMHLSRITTDLPERILDGTDAPLPESTVAEIDRLSSNFRAMSNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ADRFQEITLYSETLETRVRERTRELIRANDKLERENVERTQTEQQRDQLLDELVNQLRFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKIIDAIPNPIFYRDLNGVYQGCNRAFEENWGLSREEIVGKTVRDLFPEETVRMLQSSDR
HHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCH
DSLGKLGAEVIESQLCYADGKNHEVIIYTSTYDDTKGNPAGVVGSVVDITLRKNAEAERD
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHEEEECCCCCHHHH
RLVVELQQKNKELEGIVYVASHDLRSPLVNIQGFSRKLLKSCGELESLLAGEMDDEQRRR
HHHHHHHHCCCCCCEEEEEECCHHHCCHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LEWILKESIPKSLGFVTGSVEKMDAILKGLLRLSRLGRAALCFDTLDMQSIMEKIADSMA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YQIDTAGARVEIQRLGPCVADAGQISQVFSNLLDNAIKYRSPDRPLHVRISSQEFEEGIR
HHEECCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHH
YCVEDNGIGIPRDQQEAIWEIFHRLDPDSCQGEGLGLTLARRIVARLGGSIWVESTEGEG
HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCC
SCFYVVLRKPAQQV
CEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]