| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118578510
Identifier: 118578510
GI number: 118578510
Start: 69391
End: 70665
Strand: Direct
Name: 118578510
Synonym: Ppro_0062
Alternate gene names: NA
Gene position: 69391-70665 (Clockwise)
Preceding gene: 118578509
Following gene: 118578511
Centisome position: 1.73
GC content: 62.9
Gene sequence:
>1275_bases ATGACGGCGCCAGCCAGTGAATCGCCCGACAACAGGGGGGTGACGGATCTCCAGCGGCTCCTGCTCGAATCCCTGCGCCG GGATACTCCCCTGGCCGATGCCGGGCGATTCTCCGAACTGTCGCCGGAGGAATGGCGGGATTTCCTCTCCCTGGCGGCAG AGCAGCGGGTGCGCCCCTTGCTCTGGCATCGGCTCAGGGAGAAGGGGCTGGAACAGGCCGTTCCGGTTGAAATCGTCGAT GAACTCCGTGGGGCATCCCGCAGCAATACGCTGCGCAACCTCCGGCTGTACGCCGAACTGCGTCGGCTGCTCACCGCTCT GGAGGGGGAGGGGATTCCGCTGATCCTGCTCAAGGGGATCTTCCTGGCCGAGGCGGTGTACGGCGACATGGGGCTCAGGG AGATGAACGACATCGATGTCCTGGCCCGCCCCGGCGACGTCACGCGTATTTCGGAGATCCTGGAGGGGATGGGTTATGTC TCCCTGCATCCTCTGTCCGCGGATATCGCGCTCAAGGCTCATCAACACCTGCCCCGCATGGTCAAGGAGGGGCAGGCAGC CTTCGAGATCCACTGGAACCTGACCTCTCCGGGTGAGCGTTACAGCATCGATCCCGAAGAGTTGTGGCGGGGTGTCCTGC CAGTGCGGGTCGCCGGCTGTTCCGCGCTGACCCTGGCCCCCGAGGACTTTCTGTTGCACCTCTGTCTTCACACCTCCCAC CAGCACCAGTTTGCCTTCGGCCTGCGCCCCTCCTGCGATATCGCCCAGGTCATCACGCATTTCGCTCCGGATCTCGATTG GGATGCGCTGGTGGAGCGGGCGATGCGTTGGGGGTGGCAACGGGGAGTCTACCTGGCCCTGCTGCTGGCGAAAGAGCTGG CGGGCGCCGATGTTCCTCCCCATGTCCTGGAGATACTGCGCCCCGCAGACATGTCGAAAGAACTCCTCGATACGGCCCGG GCCCAGCTCTTCGGTGACAAGCGTCTTGCGCTCTTGGTTCCCCCGGCCTATGCCGAACTCCTGGAAAGCGCCTGCCTGTA CGATAGAATCCGCATCTTCTGGCAACGTCTCTTCCTGCCCAAGAGACTGATCGCTTCCCTGTATTCGGTGCCCGCGGATT CCCTGATGATTTACGGCTGCTATCCTCGTCGTCTCGTTGATGTTCTGTGTCGGCACGGCAACACCCTGAAGAGACACCTG CAAAACGATGCCCCCCTGAAGACTCTGGCCGAACGTACCGTCCGTATTTCTCGCTGGCTGGATGGGTCGGGGTAA
Upstream 100 bases:
>100_bases AAAAGGGGCGAATTGTCGAATCGGGCAGCCATGAAGAGTTGCTGGCCCTAGGGGGGCGCTACGAGTTCTCCTGGAGCCGC CAGATGGGGCCGGAGGTTCC
Downstream 100 bases:
>100_bases TGTGTTGGAACACACCTCCTGACGTCAGAATTCATGCCAGCCTATACTTTGCCTTCGAGTGGTGATCGACGGTATACAGC CATGTCGTTCGGACGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MTAPASESPDNRGVTDLQRLLLESLRRDTPLADAGRFSELSPEEWRDFLSLAAEQRVRPLLWHRLREKGLEQAVPVEIVD ELRGASRSNTLRNLRLYAELRRLLTALEGEGIPLILLKGIFLAEAVYGDMGLREMNDIDVLARPGDVTRISEILEGMGYV SLHPLSADIALKAHQHLPRMVKEGQAAFEIHWNLTSPGERYSIDPEELWRGVLPVRVAGCSALTLAPEDFLLHLCLHTSH QHQFAFGLRPSCDIAQVITHFAPDLDWDALVERAMRWGWQRGVYLALLLAKELAGADVPPHVLEILRPADMSKELLDTAR AQLFGDKRLALLVPPAYAELLESACLYDRIRIFWQRLFLPKRLIASLYSVPADSLMIYGCYPRRLVDVLCRHGNTLKRHL QNDAPLKTLAERTVRISRWLDGSG
Sequences:
>Translated_424_residues MTAPASESPDNRGVTDLQRLLLESLRRDTPLADAGRFSELSPEEWRDFLSLAAEQRVRPLLWHRLREKGLEQAVPVEIVD ELRGASRSNTLRNLRLYAELRRLLTALEGEGIPLILLKGIFLAEAVYGDMGLREMNDIDVLARPGDVTRISEILEGMGYV SLHPLSADIALKAHQHLPRMVKEGQAAFEIHWNLTSPGERYSIDPEELWRGVLPVRVAGCSALTLAPEDFLLHLCLHTSH QHQFAFGLRPSCDIAQVITHFAPDLDWDALVERAMRWGWQRGVYLALLLAKELAGADVPPHVLEILRPADMSKELLDTAR AQLFGDKRLALLVPPAYAELLESACLYDRIRIFWQRLFLPKRLIASLYSVPADSLMIYGCYPRRLVDVLCRHGNTLKRHL QNDAPLKTLAERTVRISRWLDGSG >Mature_423_residues TAPASESPDNRGVTDLQRLLLESLRRDTPLADAGRFSELSPEEWRDFLSLAAEQRVRPLLWHRLREKGLEQAVPVEIVDE LRGASRSNTLRNLRLYAELRRLLTALEGEGIPLILLKGIFLAEAVYGDMGLREMNDIDVLARPGDVTRISEILEGMGYVS LHPLSADIALKAHQHLPRMVKEGQAAFEIHWNLTSPGERYSIDPEELWRGVLPVRVAGCSALTLAPEDFLLHLCLHTSHQ HQFAFGLRPSCDIAQVITHFAPDLDWDALVERAMRWGWQRGVYLALLLAKELAGADVPPHVLEILRPADMSKELLDTARA QLFGDKRLALLVPPAYAELLESACLYDRIRIFWQRLFLPKRLIASLYSVPADSLMIYGCYPRRLVDVLCRHGNTLKRHLQ NDAPLKTLAERTVRISRWLDGSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47935; Mature: 47804
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPASESPDNRGVTDLQRLLLESLRRDTPLADAGRFSELSPEEWRDFLSLAAEQRVRPL CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LWHRLREKGLEQAVPVEIVDELRGASRSNTLRNLRLYAELRRLLTALEGEGIPLILLKGI HHHHHHHHCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FLAEAVYGDMGLREMNDIDVLARPGDVTRISEILEGMGYVSLHPLSADIALKAHQHLPRM HHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHH VKEGQAAFEIHWNLTSPGERYSIDPEELWRGVLPVRVAGCSALTLAPEDFLLHLCLHTSH HHCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCHHHCCCCCEEEECHHHHHHHHHHHCCC QHQFAFGLRPSCDIAQVITHFAPDLDWDALVERAMRWGWQRGVYLALLLAKELAGADVPP CCCEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH HVLEILRPADMSKELLDTARAQLFGDKRLALLVPPAYAELLESACLYDRIRIFWQRLFLP HHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH KRLIASLYSVPADSLMIYGCYPRRLVDVLCRHGNTLKRHLQNDAPLKTLAERTVRISRWL HHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHC DGSG CCCC >Mature Secondary Structure TAPASESPDNRGVTDLQRLLLESLRRDTPLADAGRFSELSPEEWRDFLSLAAEQRVRPL CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LWHRLREKGLEQAVPVEIVDELRGASRSNTLRNLRLYAELRRLLTALEGEGIPLILLKGI HHHHHHHHCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FLAEAVYGDMGLREMNDIDVLARPGDVTRISEILEGMGYVSLHPLSADIALKAHQHLPRM HHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHH VKEGQAAFEIHWNLTSPGERYSIDPEELWRGVLPVRVAGCSALTLAPEDFLLHLCLHTSH HHCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCHHHCCCCCEEEECHHHHHHHHHHHCCC QHQFAFGLRPSCDIAQVITHFAPDLDWDALVERAMRWGWQRGVYLALLLAKELAGADVPP CCCEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH HVLEILRPADMSKELLDTARAQLFGDKRLALLVPPAYAELLESACLYDRIRIFWQRLFLP HHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH KRLIASLYSVPADSLMIYGCYPRRLVDVLCRHGNTLKRHLQNDAPLKTLAERTVRISRWL HHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHC DGSG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA