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The map label for this gene is spo0J [H]

Identifier: 118480506

GI number: 118480506

Start: 5247889

End: 5248746

Strand: Reverse

Name: spo0J [H]

Synonym: BALH_4986

Alternate gene names: 118480506

Gene position: 5248746-5247889 (Counterclockwise)

Preceding gene: 118480507

Following gene: 118480504

Centisome position: 99.84

GC content: 34.73

Gene sequence:

>858_bases
TTGCAGGTGGCTAAAGGATTAGGAAGAGGAATCAATGTATTTTTTCCTGATTTAGATGTGAAAGAAGAAGAGACAATTCA
GGAGATTGTGATAACTGAATTAAGGCCGAATCCATATCAACCACGTAAACACTTTAATAAAGAGGCGATTCAGGAATTAT
CGGCTTCCATTAAAGAGCACGGCATATTACAACCGTTAATTGCTAGAAAGAGTATTAAAGGATATGAAATTGTTGCGGGT
GAAAGAAGATATCGTGCTGCTAAAGAAGCAGGACTCGAAAAGGTACCTGCTGTTGTAAGACAATTAAATGAGCAGCAAAT
GATGGAGTTTGCATTGCTTGAAAACTTACAGCGAGAAGATTTAAATCCAATGGAAGAAGCAATGGCATACCAAATGTTAA
TGAATGAGCTAAATGTGACGCAAGAACAATTAGCAAAACGTCTTGGTAAAAGCAGACCTTACATTGCAAACTATACGCGG
TTATTGAGCCTCCCTTCTTTTGTTCAAGATATGATTGCAAATGGTCAACTTTCAATGGCTCATGGGAGAACCTTGCTTAC
GATAAAAGATGAAGAACAATTGAAATCTTTATTGAAACGAATCGAAAAAGAAGGACTAAATGTTCGTCAATTAGAGAAAA
TTGTTCAGGAGATTAATCAAAGCGTTTCACGTGAAACAAAACAAGTGAAAAAAGAGAGAAACATATTTTTCATAGAGCGC
GAAACGTTCTTGAGAGAAAAGTTTGGCACAGACGTGAAAATTAAAGAAACGAAAAAAGAAAAAGGTAAAATCGAAATTGA
ATTTTTTAATAAAGAAGATTTAAATCGTATTTTAGAATTATTAGCGCAGAAAAACTAA

Upstream 100 bases:

>100_bases
GTTCGTTTGAGTGAAGCACCAAGTCATGGGAAACCAATTATGCAGTATGACGCTAAATCAAGAGGGGCAGAAGTATATAT
AGATTTAGCAGAGGAAGTGA

Downstream 100 bases:

>100_bases
AAAGCAAACCATCTTATTATTTATAGATGGTTTGCTTTTTTTAATGCACATATTTTTTGATCCGTTTCTTTTATACTCTG
TGCGATTACGTCAGCCATTT

Product: chromosome segregation DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MQVAKGLGRGINVFFPDLDVKEEETIQEIVITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARKSIKGYEIVAG
ERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTR
LLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVKKERNIFFIER
ETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN

Sequences:

>Translated_285_residues
MQVAKGLGRGINVFFPDLDVKEEETIQEIVITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARKSIKGYEIVAG
ERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTR
LLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVKKERNIFFIER
ETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN
>Mature_285_residues
MQVAKGLGRGINVFFPDLDVKEEETIQEIVITELRPNPYQPRKHFNKEAIQELSASIKEHGILQPLIARKSIKGYEIVAG
ERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQREDLNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTR
LLSLPSFVQDMIANGQLSMAHGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVKKERNIFFIER
ETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 33196; Mature: 33196

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVAKGLGRGINVFFPDLDVKEEETIQEIVITELRPNPYQPRKHFNKEAIQELSASIKEH
CCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHC
GILQPLIARKSIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQRED
CCHHHHHHHHCCCCCEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMA
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEC
HGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVKKERNIFFIER
CCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEH
ETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN
HHHHHHHHCCCCEEEHHHHHCCCEEEEEECHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVAKGLGRGINVFFPDLDVKEEETIQEIVITELRPNPYQPRKHFNKEAIQELSASIKEH
CCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHC
GILQPLIARKSIKGYEIVAGERRYRAAKEAGLEKVPAVVRQLNEQQMMEFALLENLQRED
CCHHHHHHHHCCCCCEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LNPMEEAMAYQMLMNELNVTQEQLAKRLGKSRPYIANYTRLLSLPSFVQDMIANGQLSMA
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEC
HGRTLLTIKDEEQLKSLLKRIEKEGLNVRQLEKIVQEINQSVSRETKQVKKERNIFFIER
CCCEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEH
ETFLREKFGTDVKIKETKKEKGKIEIEFFNKEDLNRILELLAQKN
HHHHHHHHCCCCEEEHHHHHCCCEEEEEECHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208 [H]