Click here to switch to the map view.

The map label for this gene is yidA [H]

Identifier: 118480428

GI number: 118480428

Start: 5161026

End: 5161847

Strand: Direct

Name: yidA [H]

Synonym: BALH_4896

Alternate gene names: 118480428

Gene position: 5161026-5161847 (Clockwise)

Preceding gene: 118480427

Following gene: 118480429

Centisome position: 98.17

GC content: 35.64

Gene sequence:

>822_bases
ATGACTTATAAAATGATTGTTTTAGATTTAGATGATACGTTATTACGTGATGACCATACTATTTCACCTCGTACGAAAGA
AGCTCTAATGACTGCGCAAGAGCAAGGAGTAAAAGTGGTACTTGCTTCCGGACGTCCAACATTCGGTATGCGCAATGTAG
CGAAAGAACTTCGTTTAGAAGAATACGGTAGTTTCATTCTATCTTTTAATGGCGCAAAAATTATTAACTGTAAAACAAAT
GAAGAAATCTTTAGTAGTACGCTTTCTCCTGAAATCGTTCACAATCTATTTGAAATTAGTAAAACTGAAGGTGTATGGAT
TCACACTTATATTGGCGATGATATCGTAACAGAAGAAAATAATCCTTATACTGAAATTGAGGGCGATATTACTGGTATGC
CAATTGTTATAGTAGATGACTTTAAAGCTGCTGTTAAAGAGCCTGTAGTAAAAGTATTAATGAATAAAGAAGCTGAACGC
CTTGTTGAAGTAGAAAAGAAACTACAAAAACAACTAGAAGGACAATTAAGCGTTATGCGTTCTAAACCATTCTTCTTAGA
ATTTACTGAAGCTGGTGTTACAAAAGGAACGAGCTTAAACCAATTAATCCAAAAGCTTGGCATTAAGCGTGAAGAAGTTA
TCGCAATGGGCGATAGCTATAACGATCAGGCGATGATTGAATTTGCTGGTCTTGGTGTTGCAATGGGCAATGCACCTGAT
GATATTAAGGAAATTGCAAACTATGTAACAGATACAAATATGAACGATGGCGTTGCAAAAGTTGTAGAGAAGTTCGTACT
AAAAAGAGAAGCGCTTGTTTAA

Upstream 100 bases:

>100_bases
GATAATTTATCTACTTCTTTCCTAAGAAGTTCGATGTCTTACTATTATTCCTTAACATCTTCATTAACATGTAATTTAAA
TAAAGAAGGGAACTTTCAAT

Downstream 100 bases:

>100_bases
TATTTCCACCCATAAAACCTATTTGAAGTCAAATACTTCAAATAGGTTTTTATTTAAATCACCATGCTTTTGTGACTATA
TTTTGAACTTTGCACTATTC

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTYKMIVLDLDDTLLRDDHTISPRTKEALMTAQEQGVKVVLASGRPTFGMRNVAKELRLEEYGSFILSFNGAKIINCKTN
EEIFSSTLSPEIVHNLFEISKTEGVWIHTYIGDDIVTEENNPYTEIEGDITGMPIVIVDDFKAAVKEPVVKVLMNKEAER
LVEVEKKLQKQLEGQLSVMRSKPFFLEFTEAGVTKGTSLNQLIQKLGIKREEVIAMGDSYNDQAMIEFAGLGVAMGNAPD
DIKEIANYVTDTNMNDGVAKVVEKFVLKREALV

Sequences:

>Translated_273_residues
MTYKMIVLDLDDTLLRDDHTISPRTKEALMTAQEQGVKVVLASGRPTFGMRNVAKELRLEEYGSFILSFNGAKIINCKTN
EEIFSSTLSPEIVHNLFEISKTEGVWIHTYIGDDIVTEENNPYTEIEGDITGMPIVIVDDFKAAVKEPVVKVLMNKEAER
LVEVEKKLQKQLEGQLSVMRSKPFFLEFTEAGVTKGTSLNQLIQKLGIKREEVIAMGDSYNDQAMIEFAGLGVAMGNAPD
DIKEIANYVTDTNMNDGVAKVVEKFVLKREALV
>Mature_272_residues
TYKMIVLDLDDTLLRDDHTISPRTKEALMTAQEQGVKVVLASGRPTFGMRNVAKELRLEEYGSFILSFNGAKIINCKTNE
EIFSSTLSPEIVHNLFEISKTEGVWIHTYIGDDIVTEENNPYTEIEGDITGMPIVIVDDFKAAVKEPVVKVLMNKEAERL
VEVEKKLQKQLEGQLSVMRSKPFFLEFTEAGVTKGTSLNQLIQKLGIKREEVIAMGDSYNDQAMIEFAGLGVAMGNAPDD
IKEIANYVTDTNMNDGVAKVVEKFVLKREALV

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=269, Percent_Identity=37.9182156133829, Blast_Score=183, Evalue=8e-48,
Organism=Escherichia coli, GI48994981, Length=277, Percent_Identity=28.5198555956679, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1786982, Length=286, Percent_Identity=25.5244755244755, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787043, Length=272, Percent_Identity=27.9411764705882, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI87081741, Length=235, Percent_Identity=24.2553191489362, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081790, Length=282, Percent_Identity=26.241134751773, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30498; Mature: 30367

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYKMIVLDLDDTLLRDDHTISPRTKEALMTAQEQGVKVVLASGRPTFGMRNVAKELRLE
CCEEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH
EYGSFILSFNGAKIINCKTNEEIFSSTLSPEIVHNLFEISKTEGVWIHTYIGDDIVTEEN
HHCCEEEEECCCEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCEEECCC
NPYTEIEGDITGMPIVIVDDFKAAVKEPVVKVLMNKEAERLVEVEKKLQKQLEGQLSVMR
CCCEEECCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
SKPFFLEFTEAGVTKGTSLNQLIQKLGIKREEVIAMGDSYNDQAMIEFAGLGVAMGNAPD
CCCCEEEECCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCCEEEEEECCEEEECCCCH
DIKEIANYVTDTNMNDGVAKVVEKFVLKREALV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TYKMIVLDLDDTLLRDDHTISPRTKEALMTAQEQGVKVVLASGRPTFGMRNVAKELRLE
CEEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH
EYGSFILSFNGAKIINCKTNEEIFSSTLSPEIVHNLFEISKTEGVWIHTYIGDDIVTEEN
HHCCEEEEECCCEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCEEECCC
NPYTEIEGDITGMPIVIVDDFKAAVKEPVVKVLMNKEAERLVEVEKKLQKQLEGQLSVMR
CCCEEECCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
SKPFFLEFTEAGVTKGTSLNQLIQKLGIKREEVIAMGDSYNDQAMIEFAGLGVAMGNAPD
CCCCEEEECCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCCEEEEEECCEEEECCCCH
DIKEIANYVTDTNMNDGVAKVVEKFVLKREALV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]