| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ywaD [H]
Identifier: 118480391
GI number: 118480391
Start: 5126840
End: 5128279
Strand: Direct
Name: ywaD [H]
Synonym: BALH_4856
Alternate gene names: 118480391
Gene position: 5126840-5128279 (Clockwise)
Preceding gene: 118480390
Following gene: 118480392
Centisome position: 97.52
GC content: 38.96
Gene sequence:
>1440_bases TTGTCAGTCAGAGAGAATAGAAGAATAGGAGAGGAAAAAATGAAAAAATCTTTGAAACAAAAAATAGTAAGCTCCTTGCT TGCTGTATCACTCGCTGTTAGCTTAGCTCCGATTGGACAAGCTAAAGCTGATTCTACGTCAGAAATCAAGCAGACTTCAT CTATCACAAAACAAGTTGATGCAAGCCGCGCTATCGAACACATCCGTTTCTTATCCGAAACAATTGGTCCTCGACCTGGC GGGACAAAATCAGAAGAATGGGCTTCCCGCTACGTTGGTATGCAGCTTAAATCAATGGGCTACGAAGTAGAATATCAACC ATTCCAAGTGCCGGATCAATACGTTGGATTTATTGAATCACCATTATCCACAAAGCGTAATTGGCAAGCTGGTGCTGCCC CTAACGCACTAATTTCTACAGAATCTGTTACAGCTCCTCTTATCTTTGTTCAAGGTGGGACAAAATTAGAGGATATCCCA AATGAAGTAAATGGAAAAATTGTTCTATTCGAAAGAGGAACAACAGTAGCTGACTATAATAAACAAGTTGAAAATGCTGT TAGCAAAGGAGCAAAAGGTGTTCTTTTATACAGTTTAATTGGTGGACGTGGAAACTACGGGCAAACTTTCAATCCCCGCC TAACGAAAAAGCAATCTATCCCTGTCTTTGGTCTTGCTTATGCGCAAGGAAATGCATTTAAAGAAGAAATCGCTAAAAAA GGAACAACAATTCTTTCCCTAAAAGCGAGACATGAATCTAATTTAACATCATTAAACGTCATCGCTAAAAAGAAACCAAA AAACAGTACAGGTAATGAAAAAGCTGTCGTTGTAAGTTCACACTACGATAGTGTCGTTGGAGCACCCGGAGCAAATGATA ATGCTTCTGGTACAGGATTAGTATTAGAGTTAGCTCGCGCTTTTCAAAATGTAGAAACTGATAAAGAAATTCGTTTTATT GCTTTTGGTTCTGAAGAGACTGGCTTACTTGGCTCCGATTATTACGTTAATAGCTTATCCCAAAAAGAACGCGATCGAAT TTTAGGTGTCTTTAACGCAGACATGGTCGCAACAAATTACGATAAAGCAAAGAATTTATATGCTATGACGCCTAACGGTT CTCCAAACCTTGTAACAGACGCAGCCTTACAAGCAGGTAAACAATTAAATAATGACCTCGTTCTACAAGGGAAATTTGGC TCTAGTGATCACGTACCGTTTGCTGAAGTTGGTATTCCTGCGGCTCTATTTATTTGGATGGGTGTCGATAGTTGGAATCC ATTAATCTACCATATCGAAAAGGTATATCACACACCTCAAGATAATGTATTTGAGAATATTTCACCTGAACGTATGAAAA TGGCACTAGAAGTAATCGGAACTGGTGTTTATAACACTCTTCAACAATCTGTTACGCAAACAGAACAGAAAGCTGCTTAA
Upstream 100 bases:
>100_bases CCAAACATATGCAAATATGCATATGTTTTTTATTTCTCAATGTCAGAATATTGAAAAATTAAAAATATAAAGGTAAAATG AAGTCGTTATCCGTCTTCTT
Downstream 100 bases:
>100_bases TCATTTTTGAAAGACCACTGATAAAGATCAGTGGTCTTTTATTGAGAAAAAATATATATGCATAAAAGCATATTTTCTCC TCCTCATTATCGTATACAAT
Product: aminopeptidase
Products: NA
Alternate protein names: Arginyl aminopeptidase; BSAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MSVRENRRIGEEKMKKSLKQKIVSSLLAVSLAVSLAPIGQAKADSTSEIKQTSSITKQVDASRAIEHIRFLSETIGPRPG GTKSEEWASRYVGMQLKSMGYEVEYQPFQVPDQYVGFIESPLSTKRNWQAGAAPNALISTESVTAPLIFVQGGTKLEDIP NEVNGKIVLFERGTTVADYNKQVENAVSKGAKGVLLYSLIGGRGNYGQTFNPRLTKKQSIPVFGLAYAQGNAFKEEIAKK GTTILSLKARHESNLTSLNVIAKKKPKNSTGNEKAVVVSSHYDSVVGAPGANDNASGTGLVLELARAFQNVETDKEIRFI AFGSEETGLLGSDYYVNSLSQKERDRILGVFNADMVATNYDKAKNLYAMTPNGSPNLVTDAALQAGKQLNNDLVLQGKFG SSDHVPFAEVGIPAALFIWMGVDSWNPLIYHIEKVYHTPQDNVFENISPERMKMALEVIGTGVYNTLQQSVTQTEQKAA
Sequences:
>Translated_479_residues MSVRENRRIGEEKMKKSLKQKIVSSLLAVSLAVSLAPIGQAKADSTSEIKQTSSITKQVDASRAIEHIRFLSETIGPRPG GTKSEEWASRYVGMQLKSMGYEVEYQPFQVPDQYVGFIESPLSTKRNWQAGAAPNALISTESVTAPLIFVQGGTKLEDIP NEVNGKIVLFERGTTVADYNKQVENAVSKGAKGVLLYSLIGGRGNYGQTFNPRLTKKQSIPVFGLAYAQGNAFKEEIAKK GTTILSLKARHESNLTSLNVIAKKKPKNSTGNEKAVVVSSHYDSVVGAPGANDNASGTGLVLELARAFQNVETDKEIRFI AFGSEETGLLGSDYYVNSLSQKERDRILGVFNADMVATNYDKAKNLYAMTPNGSPNLVTDAALQAGKQLNNDLVLQGKFG SSDHVPFAEVGIPAALFIWMGVDSWNPLIYHIEKVYHTPQDNVFENISPERMKMALEVIGTGVYNTLQQSVTQTEQKAA >Mature_478_residues SVRENRRIGEEKMKKSLKQKIVSSLLAVSLAVSLAPIGQAKADSTSEIKQTSSITKQVDASRAIEHIRFLSETIGPRPGG TKSEEWASRYVGMQLKSMGYEVEYQPFQVPDQYVGFIESPLSTKRNWQAGAAPNALISTESVTAPLIFVQGGTKLEDIPN EVNGKIVLFERGTTVADYNKQVENAVSKGAKGVLLYSLIGGRGNYGQTFNPRLTKKQSIPVFGLAYAQGNAFKEEIAKKG TTILSLKARHESNLTSLNVIAKKKPKNSTGNEKAVVVSSHYDSVVGAPGANDNASGTGLVLELARAFQNVETDKEIRFIA FGSEETGLLGSDYYVNSLSQKERDRILGVFNADMVATNYDKAKNLYAMTPNGSPNLVTDAALQAGKQLNNDLVLQGKFGS SDHVPFAEVGIPAALFIWMGVDSWNPLIYHIEKVYHTPQDNVFENISPERMKMALEVIGTGVYNTLQQSVTQTEQKAA
Specific function: Catalyzes the hydrolysis of a range of N-terminal amino acids [H]
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M28 family. M28B subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319763, Length=164, Percent_Identity=34.7560975609756, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007484 - InterPro: IPR003137 [H]
Pfam domain/function: PF02225 PA; PF04389 Peptidase_M28 [H]
EC number: =3.4.11.6; =3.4.11.10 [H]
Molecular weight: Translated: 52163; Mature: 52031
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRENRRIGEEKMKKSLKQKIVSSLLAVSLAVSLAPIGQAKADSTSEIKQTSSITKQVD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ASRAIEHIRFLSETIGPRPGGTKSEEWASRYVGMQLKSMGYEVEYQPFQVPDQYVGFIES HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHC PLSTKRNWQAGAAPNALISTESVTAPLIFVQGGTKLEDIPNEVNGKIVLFERGTTVADYN CCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHCCCCCCCCEEEEEECCCCHHHHH KQVENAVSKGAKGVLLYSLIGGRGNYGQTFNPRLTKKQSIPVFGLAYAQGNAFKEEIAKK HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHC GTTILSLKARHESNLTSLNVIAKKKPKNSTGNEKAVVVSSHYDSVVGAPGANDNASGTGL CCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCHH VLELARAFQNVETDKEIRFIAFGSEETGLLGSDYYVNSLSQKERDRILGVFNADMVATNY HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCEEECCC DKAKNLYAMTPNGSPNLVTDAALQAGKQLNNDLVLQGKFGSSDHVPFAEVGIPAALFIWM HHHCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCEEEEEEE GVDSWNPLIYHIEKVYHTPQDNVFENISPERMKMALEVIGTGVYNTLQQSVTQTEQKAA CCCCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVRENRRIGEEKMKKSLKQKIVSSLLAVSLAVSLAPIGQAKADSTSEIKQTSSITKQVD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ASRAIEHIRFLSETIGPRPGGTKSEEWASRYVGMQLKSMGYEVEYQPFQVPDQYVGFIES HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHC PLSTKRNWQAGAAPNALISTESVTAPLIFVQGGTKLEDIPNEVNGKIVLFERGTTVADYN CCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHCCCCCCCCEEEEEECCCCHHHHH KQVENAVSKGAKGVLLYSLIGGRGNYGQTFNPRLTKKQSIPVFGLAYAQGNAFKEEIAKK HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHC GTTILSLKARHESNLTSLNVIAKKKPKNSTGNEKAVVVSSHYDSVVGAPGANDNASGTGL CCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCHH VLELARAFQNVETDKEIRFIAFGSEETGLLGSDYYVNSLSQKERDRILGVFNADMVATNY HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCEEECCC DKAKNLYAMTPNGSPNLVTDAALQAGKQLNNDLVLQGKFGSSDHVPFAEVGIPAALFIWM HHHCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCEEEEEEE GVDSWNPLIYHIEKVYHTPQDNVFENISPERMKMALEVIGTGVYNTLQQSVTQTEQKAA CCCCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 1806041 [H]