Definition Bacillus thuringiensis str. Al Hakam chromosome, complete genome.
Accession NC_008600
Length 5,257,091

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The map label for this gene is ywaD [H]

Identifier: 118480391

GI number: 118480391

Start: 5126840

End: 5128279

Strand: Direct

Name: ywaD [H]

Synonym: BALH_4856

Alternate gene names: 118480391

Gene position: 5126840-5128279 (Clockwise)

Preceding gene: 118480390

Following gene: 118480392

Centisome position: 97.52

GC content: 38.96

Gene sequence:

>1440_bases
TTGTCAGTCAGAGAGAATAGAAGAATAGGAGAGGAAAAAATGAAAAAATCTTTGAAACAAAAAATAGTAAGCTCCTTGCT
TGCTGTATCACTCGCTGTTAGCTTAGCTCCGATTGGACAAGCTAAAGCTGATTCTACGTCAGAAATCAAGCAGACTTCAT
CTATCACAAAACAAGTTGATGCAAGCCGCGCTATCGAACACATCCGTTTCTTATCCGAAACAATTGGTCCTCGACCTGGC
GGGACAAAATCAGAAGAATGGGCTTCCCGCTACGTTGGTATGCAGCTTAAATCAATGGGCTACGAAGTAGAATATCAACC
ATTCCAAGTGCCGGATCAATACGTTGGATTTATTGAATCACCATTATCCACAAAGCGTAATTGGCAAGCTGGTGCTGCCC
CTAACGCACTAATTTCTACAGAATCTGTTACAGCTCCTCTTATCTTTGTTCAAGGTGGGACAAAATTAGAGGATATCCCA
AATGAAGTAAATGGAAAAATTGTTCTATTCGAAAGAGGAACAACAGTAGCTGACTATAATAAACAAGTTGAAAATGCTGT
TAGCAAAGGAGCAAAAGGTGTTCTTTTATACAGTTTAATTGGTGGACGTGGAAACTACGGGCAAACTTTCAATCCCCGCC
TAACGAAAAAGCAATCTATCCCTGTCTTTGGTCTTGCTTATGCGCAAGGAAATGCATTTAAAGAAGAAATCGCTAAAAAA
GGAACAACAATTCTTTCCCTAAAAGCGAGACATGAATCTAATTTAACATCATTAAACGTCATCGCTAAAAAGAAACCAAA
AAACAGTACAGGTAATGAAAAAGCTGTCGTTGTAAGTTCACACTACGATAGTGTCGTTGGAGCACCCGGAGCAAATGATA
ATGCTTCTGGTACAGGATTAGTATTAGAGTTAGCTCGCGCTTTTCAAAATGTAGAAACTGATAAAGAAATTCGTTTTATT
GCTTTTGGTTCTGAAGAGACTGGCTTACTTGGCTCCGATTATTACGTTAATAGCTTATCCCAAAAAGAACGCGATCGAAT
TTTAGGTGTCTTTAACGCAGACATGGTCGCAACAAATTACGATAAAGCAAAGAATTTATATGCTATGACGCCTAACGGTT
CTCCAAACCTTGTAACAGACGCAGCCTTACAAGCAGGTAAACAATTAAATAATGACCTCGTTCTACAAGGGAAATTTGGC
TCTAGTGATCACGTACCGTTTGCTGAAGTTGGTATTCCTGCGGCTCTATTTATTTGGATGGGTGTCGATAGTTGGAATCC
ATTAATCTACCATATCGAAAAGGTATATCACACACCTCAAGATAATGTATTTGAGAATATTTCACCTGAACGTATGAAAA
TGGCACTAGAAGTAATCGGAACTGGTGTTTATAACACTCTTCAACAATCTGTTACGCAAACAGAACAGAAAGCTGCTTAA

Upstream 100 bases:

>100_bases
CCAAACATATGCAAATATGCATATGTTTTTTATTTCTCAATGTCAGAATATTGAAAAATTAAAAATATAAAGGTAAAATG
AAGTCGTTATCCGTCTTCTT

Downstream 100 bases:

>100_bases
TCATTTTTGAAAGACCACTGATAAAGATCAGTGGTCTTTTATTGAGAAAAAATATATATGCATAAAAGCATATTTTCTCC
TCCTCATTATCGTATACAAT

Product: aminopeptidase

Products: NA

Alternate protein names: Arginyl aminopeptidase; BSAP; Leucyl aminopeptidase [H]

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MSVRENRRIGEEKMKKSLKQKIVSSLLAVSLAVSLAPIGQAKADSTSEIKQTSSITKQVDASRAIEHIRFLSETIGPRPG
GTKSEEWASRYVGMQLKSMGYEVEYQPFQVPDQYVGFIESPLSTKRNWQAGAAPNALISTESVTAPLIFVQGGTKLEDIP
NEVNGKIVLFERGTTVADYNKQVENAVSKGAKGVLLYSLIGGRGNYGQTFNPRLTKKQSIPVFGLAYAQGNAFKEEIAKK
GTTILSLKARHESNLTSLNVIAKKKPKNSTGNEKAVVVSSHYDSVVGAPGANDNASGTGLVLELARAFQNVETDKEIRFI
AFGSEETGLLGSDYYVNSLSQKERDRILGVFNADMVATNYDKAKNLYAMTPNGSPNLVTDAALQAGKQLNNDLVLQGKFG
SSDHVPFAEVGIPAALFIWMGVDSWNPLIYHIEKVYHTPQDNVFENISPERMKMALEVIGTGVYNTLQQSVTQTEQKAA

Sequences:

>Translated_479_residues
MSVRENRRIGEEKMKKSLKQKIVSSLLAVSLAVSLAPIGQAKADSTSEIKQTSSITKQVDASRAIEHIRFLSETIGPRPG
GTKSEEWASRYVGMQLKSMGYEVEYQPFQVPDQYVGFIESPLSTKRNWQAGAAPNALISTESVTAPLIFVQGGTKLEDIP
NEVNGKIVLFERGTTVADYNKQVENAVSKGAKGVLLYSLIGGRGNYGQTFNPRLTKKQSIPVFGLAYAQGNAFKEEIAKK
GTTILSLKARHESNLTSLNVIAKKKPKNSTGNEKAVVVSSHYDSVVGAPGANDNASGTGLVLELARAFQNVETDKEIRFI
AFGSEETGLLGSDYYVNSLSQKERDRILGVFNADMVATNYDKAKNLYAMTPNGSPNLVTDAALQAGKQLNNDLVLQGKFG
SSDHVPFAEVGIPAALFIWMGVDSWNPLIYHIEKVYHTPQDNVFENISPERMKMALEVIGTGVYNTLQQSVTQTEQKAA
>Mature_478_residues
SVRENRRIGEEKMKKSLKQKIVSSLLAVSLAVSLAPIGQAKADSTSEIKQTSSITKQVDASRAIEHIRFLSETIGPRPGG
TKSEEWASRYVGMQLKSMGYEVEYQPFQVPDQYVGFIESPLSTKRNWQAGAAPNALISTESVTAPLIFVQGGTKLEDIPN
EVNGKIVLFERGTTVADYNKQVENAVSKGAKGVLLYSLIGGRGNYGQTFNPRLTKKQSIPVFGLAYAQGNAFKEEIAKKG
TTILSLKARHESNLTSLNVIAKKKPKNSTGNEKAVVVSSHYDSVVGAPGANDNASGTGLVLELARAFQNVETDKEIRFIA
FGSEETGLLGSDYYVNSLSQKERDRILGVFNADMVATNYDKAKNLYAMTPNGSPNLVTDAALQAGKQLNNDLVLQGKFGS
SDHVPFAEVGIPAALFIWMGVDSWNPLIYHIEKVYHTPQDNVFENISPERMKMALEVIGTGVYNTLQQSVTQTEQKAA

Specific function: Catalyzes the hydrolysis of a range of N-terminal amino acids [H]

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M28 family. M28B subfamily [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319763, Length=164, Percent_Identity=34.7560975609756, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007484
- InterPro:   IPR003137 [H]

Pfam domain/function: PF02225 PA; PF04389 Peptidase_M28 [H]

EC number: =3.4.11.6; =3.4.11.10 [H]

Molecular weight: Translated: 52163; Mature: 52031

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRENRRIGEEKMKKSLKQKIVSSLLAVSLAVSLAPIGQAKADSTSEIKQTSSITKQVD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ASRAIEHIRFLSETIGPRPGGTKSEEWASRYVGMQLKSMGYEVEYQPFQVPDQYVGFIES
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHC
PLSTKRNWQAGAAPNALISTESVTAPLIFVQGGTKLEDIPNEVNGKIVLFERGTTVADYN
CCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHCCCCCCCCEEEEEECCCCHHHHH
KQVENAVSKGAKGVLLYSLIGGRGNYGQTFNPRLTKKQSIPVFGLAYAQGNAFKEEIAKK
HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHC
GTTILSLKARHESNLTSLNVIAKKKPKNSTGNEKAVVVSSHYDSVVGAPGANDNASGTGL
CCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCHH
VLELARAFQNVETDKEIRFIAFGSEETGLLGSDYYVNSLSQKERDRILGVFNADMVATNY
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCEEECCC
DKAKNLYAMTPNGSPNLVTDAALQAGKQLNNDLVLQGKFGSSDHVPFAEVGIPAALFIWM
HHHCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCEEEEEEE
GVDSWNPLIYHIEKVYHTPQDNVFENISPERMKMALEVIGTGVYNTLQQSVTQTEQKAA
CCCCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVRENRRIGEEKMKKSLKQKIVSSLLAVSLAVSLAPIGQAKADSTSEIKQTSSITKQVD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ASRAIEHIRFLSETIGPRPGGTKSEEWASRYVGMQLKSMGYEVEYQPFQVPDQYVGFIES
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHC
PLSTKRNWQAGAAPNALISTESVTAPLIFVQGGTKLEDIPNEVNGKIVLFERGTTVADYN
CCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHCCCCCCCCEEEEEECCCCHHHHH
KQVENAVSKGAKGVLLYSLIGGRGNYGQTFNPRLTKKQSIPVFGLAYAQGNAFKEEIAKK
HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHC
GTTILSLKARHESNLTSLNVIAKKKPKNSTGNEKAVVVSSHYDSVVGAPGANDNASGTGL
CCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCHH
VLELARAFQNVETDKEIRFIAFGSEETGLLGSDYYVNSLSQKERDRILGVFNADMVATNY
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCEEECCC
DKAKNLYAMTPNGSPNLVTDAALQAGKQLNNDLVLQGKFGSSDHVPFAEVGIPAALFIWM
HHHCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCEEEEEEE
GVDSWNPLIYHIEKVYHTPQDNVFENISPERMKMALEVIGTGVYNTLQQSVTQTEQKAA
CCCCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377; 1806041 [H]